RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W MAP1Q01662 387 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
SHH4YLR164W GAS3Q03655 524 aa9.91□□□□□ -0.82
SHH4YLR164W FMN1Q03778 218 aa9.91□□□□□ -0.82
SHH4YLR164W CIA1Q05583 330 aa9.91□□□□□ -0.82
SHH4YLR164W FAR10Q06001 478 aa9.91□□□□□ -0.82
SHH4YLR164W SEC10Q06245 871 aa9.91□□□□□ -0.82
SHH4YLR164W GNT1Q12096 491 aa9.91□□□□□ -0.82
SHH4YLR164W SBP1P10080 294 aaKnown RBP9.9□□□□□ -0.82
SHH4YLR164W APA1P16550 321 aaKnown RBP9.9□□□□□ -0.82
SHH4YLR164W CLB1P24868 471 aa9.9□□□□□ -0.82
SHH4YLR164W GFD2P25370 566 aaKnown RBP9.9□□□□□ -0.82
SHH4YLR164W MRE11P32829 692 aa9.9□□□□□ -0.82
SHH4YLR164W CAB3P36076 571 aa9.9□□□□□ -0.82
SHH4YLR164W STB6P36085 766 aa9.9□□□□□ -0.82
SHH4YLR164W RIM11P38615 370 aa9.9□□□□□ -0.82
SHH4YLR164W SHU2P38957 223 aa9.9□□□□□ -0.82
SHH4YLR164W STB2P46679 850 aa9.9□□□□□ -0.82
SHH4YLR164W NBP35P52920 328 aa9.9□□□□□ -0.82
SHH4YLR164W SWC4P53201 476 aa9.9□□□□□ -0.82
SHH4YLR164W CLD1P53264 445 aa9.9□□□□□ -0.82
SHH4YLR164W YPL109CQ02981 657 aa9.9□□□□□ -0.82
SHH4YLR164W SSL1Q04673 461 aaPredicted RBP9.9□□□□□ -0.82
SHH4YLR164W GLO2Q05584 274 aa9.9□□□□□ -0.82
SHH4YLR164W ATG10Q07879 167 aa9.9□□□□□ -0.82
SHH4YLR164W ALR1Q08269 859 aa9.9□□□□□ -0.82
SHH4YLR164W OSW1Q08692 278 aa9.9□□□□□ -0.82
SHH4YLR164W SUC2P00724 532 aa9.89□□□□□ -0.83
SHH4YLR164W EXO70P19658 623 aa9.89□□□□□ -0.83
SHH4YLR164W VAN1P23642 535 aa9.89□□□□□ -0.83
SHH4YLR164W GUT1P32190 709 aa9.89□□□□□ -0.83
SHH4YLR164W PDB1P32473 366 aaKnown RBP9.89□□□□□ -0.83
SHH4YLR164W SKT5P34226 696 aa9.89□□□□□ -0.83
SHH4YLR164W DBP8P38719 431 aa9.89□□□□□ -0.83
SHH4YLR164W GDH3P39708 457 aa9.89□□□□□ -0.83
SHH4YLR164W GCD14P46959 383 aaPredicted RBP9.89□□□□□ -0.83
SHH4YLR164W LSM3P57743 89 aaKnown RBP9.89□□□□□ -0.83
SHH4YLR164W VAM6Q07468 1049 aa9.89□□□□□ -0.83
SHH4YLR164W BUD7Q08754 746 aa9.89□□□□□ -0.83
SHH4YLR164W CET1O13297 549 aaPredicted RBP9.88□□□□□ -0.83
SHH4YLR164W PMR1P13586 950 aa9.88□□□□□ -0.83
SHH4YLR164W GUK1P15454 187 aaKnown RBP9.88□□□□□ -0.83
SHH4YLR164W EPT1P22140 391 aa9.88□□□□□ -0.83
SHH4YLR164W RFA2P26754 273 aaKnown RBP9.88□□□□□ -0.83
SHH4YLR164W TIP20P33891 701 aa9.88□□□□□ -0.83
SHH4YLR164W SPT23P35210 1082 aa9.88□□□□□ -0.83
SHH4YLR164W TAE1P38340 232 aa9.88□□□□□ -0.83
SHH4YLR164W USE1P53146 245 aa9.88□□□□□ -0.83
SHH4YLR164W IBD2P53892 351 aa9.88□□□□□ -0.83
SHH4YLR164W UBP2Q01476 1272 aa9.88□□□□□ -0.83
SHH4YLR164W YET2Q04210 160 aa9.88□□□□□ -0.83
SHH4YLR164W PST1Q12355 444 aa9.88□□□□□ -0.83
SHH4YLR164W YOL087CQ99247 1116 aa9.88□□□□□ -0.83
SHH4YLR164W FUM1P08417 488 aaKnown RBP9.87□□□□□ -0.83
SHH4YLR164W RPB4P20433 221 aaPredicted RBP9.87□□□□□ -0.83
SHH4YLR164W RAD14P28519 371 aa9.87□□□□□ -0.83
SHH4YLR164W PTH2P34222 208 aa9.87□□□□□ -0.83
SHH4YLR164W PTC1P35182 281 aa9.87□□□□□ -0.83
SHH4YLR164W IML3P38265 245 aa9.87□□□□□ -0.83
SHH4YLR164W YHR045WP38775 560 aa9.87□□□□□ -0.83
SHH4YLR164W HST3P53687 447 aa9.87□□□□□ -0.83
SHH4YLR164W RSC3Q06639 885 aa9.87□□□□□ -0.83
SHH4YLR164W YPR084WQ06821 456 aa9.87□□□□□ -0.83
SHH4YLR164W HBT1Q07653 1046 aaKnown RBP9.87□□□□□ -0.83
SHH4YLR164W GPB1Q08886 897 aa9.87□□□□□ -0.83
SHH4YLR164W Q0182Q9ZZW1 134 aa9.87□□□□□ -0.83
SHH4YLR164W FAB1P34756 2278 aa9.87□□□□□ -0.83
SHH4YLR164W CDC21P06785 304 aa9.86□□□□□ -0.83
SHH4YLR164W YHR020WP38708 688 aaKnown RBP9.86□□□□□ -0.83
SHH4YLR164W BZZ1P38822 633 aa9.86□□□□□ -0.83
SHH4YLR164W CYC2P38909 366 aa9.86□□□□□ -0.83
SHH4YLR164W DHH1P39517 506 aaKnown RBP9.86□□□□□ -0.83
SHH4YLR164W YRB1P41920 201 aaKnown RBP9.86□□□□□ -0.83
SHH4YLR164W FAA4P47912 694 aaKnown RBP9.86□□□□□ -0.83
SHH4YLR164W BIO5P53744 561 aaKnown RBP9.86□□□□□ -0.83
SHH4YLR164W CWC24P53769 259 aa9.86□□□□□ -0.83
SHH4YLR164W SLM2P53955 656 aa9.86□□□□□ -0.83
SHH4YLR164W NPL3Q01560 414 aaKnown RBP RIP-Chip data9.86□□□□□ -0.83not detected
SHH4YLR164W AAT1Q01802 451 aa9.86□□□□□ -0.83
SHH4YLR164W SMA1Q02651 245 aa9.86□□□□□ -0.83
SHH4YLR164W VTA1Q06263 330 aa9.86□□□□□ -0.83
SHH4YLR164W YOL019WQ08157 551 aa9.86□□□□□ -0.83
SHH4YLR164W DIA2Q08496 732 aaPredicted RBP9.86□□□□□ -0.83
SHH4YLR164W TGL5Q12043 749 aa9.86□□□□□ -0.83
SHH4YLR164W MEX67Q99257 599 aaKnown RBP9.86□□□□□ -0.83
SHH4YLR164W NMT1P14743 455 aa9.85□□□□□ -0.83
SHH4YLR164W RSC6P25632 483 aa9.85□□□□□ -0.83
SHH4YLR164W RML2P32611 393 aa9.85□□□□□ -0.83
SHH4YLR164W GMH1P36125 273 aa9.85□□□□□ -0.83
SHH4YLR164W SOL2P37262 315 aa9.85□□□□□ -0.83
SHH4YLR164W DSF2P38213 736 aa9.85□□□□□ -0.83
SHH4YLR164W HSE1P38753 452 aa9.85□□□□□ -0.83
SHH4YLR164W YHR078WP38799 552 aa9.85□□□□□ -0.83
SHH4YLR164W EFM5P53200 248 aaKnown RBP9.85□□□□□ -0.83
SHH4YLR164W REX2P54964 269 aaKnown RBP9.85□□□□□ -0.83
SHH4YLR164W ECM9Q02202 377 aa9.85□□□□□ -0.83
SHH4YLR164W NHP10Q03435 203 aa9.85□□□□□ -0.83
SHH4YLR164W YEH2Q07950 538 aa9.85□□□□□ -0.83
SHH4YLR164W ESA1Q08649 445 aa9.85□□□□□ -0.83
SHH4YLR164W HEM2P05373 342 aa9.84□□□□□ -0.83
SHH4YLR164W YAR066WP0CX18 203 aa9.84□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms