RNA–Protein interactions for RNA: YLR033W

RSC58, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC58, Length 1,509 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC58	YLR033W	CDC8	P00572	216 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	CDC24	P11433	854 aa	Predicted RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	SIR1	P21691	654 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	PPH22	P23595	377 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	UBC6	P33296	250 aa	Predicted RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	OLA1	P38219	394 aa	Known RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	YBP1	P38315	674 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	POP4	P38336	279 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	BIT2	P38346	545 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	OTU2	P38747	307 aa	Known RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	AIM18	P38884	321 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	STL1	P39932	569 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	EDC3	P39998	551 aa	Known RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	ATM1	P40416	690 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	YIL161W	P40449	235 aa	Known RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	MNN11	P46985	422 aa	Known RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	RTT101	P47050	842 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	RFX1	P48743	811 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	TAN1	P53072	289 aa	Predicted RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	ALG12	P53730	551 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	DOS2	P54858	310 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	HBT1	Q07653	1046 aa	Known RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	NUR1	Q12066	484 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	YLL056C	Q12177	298 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	EFG1	Q3E705	233 aa	Known RBP	4.22	□□□□□ -1.73
RSC58	YLR033W	SEY1	Q99287	776 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	UBR1	P19812	1950 aa		4.22	□□□□□ -1.73
RSC58	YLR033W	YMR084W	A2P2R3	262 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	SPO16	P17122	198 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	MGT1	P26188	188 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	SEC6	P32844	805 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	SGE1	P33335	543 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	RRP1	P35178	278 aa	Predicted RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	TSL1	P38427	1098 aa	Known RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	DIA4	P38705	446 aa	Predicted RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	CKB2	P38930	258 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	YEL028W	P39989	153 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	TOK1	P40310	691 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	UBP7	P40453	1071 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	BST1	P43571	1029 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	MIC19	P43594	170 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	RPS10B	P46784	105 aa	Known RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	SNG1	P46950	547 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	HLJ1	P48353	224 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	PRP24	P49960	444 aa	Known RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	VPS9	P54787	451 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	LEE1	Q02799	301 aa	Known RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	SSL1	Q04673	461 aa	Predicted RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	ECM38	Q05902	660 aa	Predicted RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	YDL073W	Q07454	984 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	NOP6	Q07623	225 aa	Known RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	RPS10A	Q08745	105 aa	Predicted RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	FRE5	Q08908	694 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	DAP1	Q12091	152 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	RIO1	Q12196	484 aa	Known RBP	4.21	□□□□□ -1.73
RSC58	YLR033W	GPM3	Q12326	303 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	AI5_ALPHA	Q9ZZX1	630 aa		4.21	□□□□□ -1.73
RSC58	YLR033W	CMD1	P06787	147 aa	Known RBP	4.21	□□□□□ -1.74
RSC58	YLR033W	YML002W	P0CF17	737 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	CBF1	P17106	351 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	MDM10	P18409	493 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	BET2	P20133	325 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	PLC1	P32383	869 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	RAD5	P32849	1169 aa	Predicted RBP	4.21	□□□□□ -1.74
RSC58	YLR033W	LAS1	P36146	502 aa	Predicted RBP	4.21	□□□□□ -1.74
RSC58	YLR033W	ATG12	P38316	186 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	MED6	P38782	295 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	PPE1	P38796	400 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	INA22	P40576	216 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	UBP6	P43593	499 aa	Known RBP	4.21	□□□□□ -1.74
RSC58	YLR033W	TRF5	P48561	642 aa	Known RBP	4.21	□□□□□ -1.74
RSC58	YLR033W	YMR160W	Q03823	816 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	SWC7	Q06707	132 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	PEX15	Q08215	383 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	YLR125W	Q12138	136 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
RSC58	YLR033W	AFI1	Q99222	893 aa		4.21	□□□□□ -1.74
RSC58	YLR033W	QCR6	P00127	147 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	RPB2	P08518	1224 aa	Known RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	SGF29	P25554	259 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	IMG2	P25642	146 aa	Predicted RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	PPZ1	P26570	692 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	TPS2	P31688	896 aa	Known RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	THI4	P32318	326 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	RPC82	P32349	654 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	MRS6	P32864	603 aa	Known RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	YKL097C	P34245	136 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	RRP14	P36080	434 aa	Known RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	KAP104	P38217	918 aa	Known RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	SPP381	P38282	291 aa	Predicted RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	SRP68	P38687	599 aa	Known RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	SAP1	P39955	897 aa	Known RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	SCC4	P40090	624 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	YJL132W	P47014	750 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	TCB2	P48231	1178 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	ASN2	P49090	572 aa	Known RBP	4.2	□□□□□ -1.74
RSC58	YLR033W	TIM13	P53299	105 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	TOF2	Q02208	771 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	INP2	Q03824	705 aa		4.2	□□□□□ -1.74
RSC58	YLR033W	YHM2	Q04013	314 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms