RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W SPT7P35177 1332 aa3.42□□□□□ -1.86
VMA5YKL080W RPB2P08518 1224 aaKnown RBP3.41□□□□□ -1.86
VMA5YKL080W CLC1P17891 233 aa3.41□□□□□ -1.86
VMA5YKL080W REC107P21651 314 aa3.41□□□□□ -1.86
VMA5YKL080W NPR2P39923 615 aa3.41□□□□□ -1.86
VMA5YKL080W YAT2P40017 923 aa3.41□□□□□ -1.86
VMA5YKL080W ROK1P45818 564 aaPredicted RBP3.41□□□□□ -1.86
VMA5YKL080W MSY1P48527 492 aa3.41□□□□□ -1.86
VMA5YKL080W DUO1P53168 247 aaKnown RBP3.41□□□□□ -1.86
VMA5YKL080W YGR066CP53242 292 aa3.41□□□□□ -1.86
VMA5YKL080W OGG1P53397 376 aaPredicted RBP3.41□□□□□ -1.86
VMA5YKL080W MFB1Q04922 465 aa3.41□□□□□ -1.86
VMA5YKL080W MLH2Q07980 695 aa3.41□□□□□ -1.86
VMA5YKL080W NRT1Q08485 598 aa3.41□□□□□ -1.86
VMA5YKL080W NDD1Q08887 554 aa3.41□□□□□ -1.86
VMA5YKL080W ISA2Q12425 185 aa3.41□□□□□ -1.86
VMA5YKL080W ATP2P00830 511 aaKnown RBP3.4□□□□□ -1.87
VMA5YKL080W PMS1P14242 873 aa3.4□□□□□ -1.87
VMA5YKL080W RPC53P25441 422 aa3.4□□□□□ -1.87
VMA5YKL080W PEP3P27801 918 aa3.4□□□□□ -1.87
VMA5YKL080W ERG3P32353 365 aa3.4□□□□□ -1.87
VMA5YKL080W TPA1P40032 644 aaKnown RBP3.4□□□□□ -1.87
VMA5YKL080W YJL068CP40363 299 aa3.4□□□□□ -1.87
VMA5YKL080W LYS14P40971 790 aa3.4□□□□□ -1.87
VMA5YKL080W UBP8P50102 471 aa3.4□□□□□ -1.87
VMA5YKL080W ATP22P50273 684 aaPredicted RBP3.4□□□□□ -1.87
VMA5YKL080W COG1P53079 417 aa3.4□□□□□ -1.87
VMA5YKL080W ARE2P53629 642 aaKnown RBP3.4□□□□□ -1.87
VMA5YKL080W VPS75P53853 264 aa3.4□□□□□ -1.87
VMA5YKL080W GTB1Q04924 702 aa3.4□□□□□ -1.87
VMA5YKL080W ARP9Q05123 467 aa3.4□□□□□ -1.87
VMA5YKL080W PIG1Q06216 648 aa3.4□□□□□ -1.87
VMA5YKL080W YLR049CQ12110 428 aa3.4□□□□□ -1.87
VMA5YKL080W ARG3P05150 338 aa3.39□□□□□ -1.87
VMA5YKL080W DFR1P07807 211 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
VMA5YKL080W GPA1P08539 472 aa3.39□□□□□ -1.87
VMA5YKL080W TY2A-LR1P0C2J4 438 aa3.39□□□□□ -1.87
VMA5YKL080W TY2A-FP0CX61 438 aa3.39□□□□□ -1.87
VMA5YKL080W TY2A-GR2P0CX62 438 aa3.39□□□□□ -1.87
VMA5YKL080W ROX1P25042 368 aa3.39□□□□□ -1.87
VMA5YKL080W TY2A-CP25383 438 aa3.39□□□□□ -1.87
VMA5YKL080W MRP20P32387 263 aa3.39□□□□□ -1.87
VMA5YKL080W RPN2P32565 945 aaKnown RBP3.39□□□□□ -1.87
VMA5YKL080W AGP2P38090 596 aa3.39□□□□□ -1.87
VMA5YKL080W OTU2P38747 307 aaKnown RBP3.39□□□□□ -1.87
VMA5YKL080W BUD16P39988 312 aa3.39□□□□□ -1.87
VMA5YKL080W LSM5P40089 93 aaKnown RBP3.39□□□□□ -1.87
VMA5YKL080W VRG4P40107 337 aa3.39□□□□□ -1.87
VMA5YKL080W SLZ1P40167 298 aa3.39□□□□□ -1.87
VMA5YKL080W BUD27P43573 796 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
VMA5YKL080W SAD1P43589 448 aa3.39□□□□□ -1.87
VMA5YKL080W OCA1P50946 238 aaPredicted RBP3.39□□□□□ -1.87
VMA5YKL080W RRT6P53117 311 aaPredicted RBP3.39□□□□□ -1.87
VMA5YKL080W TY2A-DR2Q03483 438 aa3.39□□□□□ -1.87
VMA5YKL080W POS5Q06892 414 aa3.39□□□□□ -1.87
VMA5YKL080W TCO89Q08921 799 aa3.39□□□□□ -1.87
VMA5YKL080W SWT1Q12104 458 aa3.39□□□□□ -1.87
VMA5YKL080W TY2A-BQ12260 438 aa3.39□□□□□ -1.87
VMA5YKL080W TY2A-OR2Q12293 438 aa3.39□□□□□ -1.87
VMA5YKL080W TY2A-DR1Q12392 438 aa3.39□□□□□ -1.87
VMA5YKL080W TY2A-OR1Q12439 438 aa3.39□□□□□ -1.87
VMA5YKL080W TY2A-DR3Q99303 438 aa3.39□□□□□ -1.87
VMA5YKL080W YFL068WP0CX99 160 aa3.38□□□□□ -1.87
VMA5YKL080W YLL066W-AP0CY00 160 aa3.38□□□□□ -1.87
VMA5YKL080W YLL067W-AP0CY01 160 aa3.38□□□□□ -1.87
VMA5YKL080W MRP2P10663 115 aaPredicted RBP3.38□□□□□ -1.87
VMA5YKL080W CLB3P24870 427 aa3.38□□□□□ -1.87
VMA5YKL080W ADE17P38009 592 aaKnown RBP3.38□□□□□ -1.87
VMA5YKL080W UBP13P38187 747 aa3.38□□□□□ -1.87
VMA5YKL080W YNG2P38806 282 aaKnown RBP3.38□□□□□ -1.87
VMA5YKL080W YGR016WP53209 190 aa3.38□□□□□ -1.87
VMA5YKL080W ZDS2P54786 942 aa3.38□□□□□ -1.87
VMA5YKL080W YSA1Q01976 231 aa3.38□□□□□ -1.87
VMA5YKL080W RMT2Q03305 412 aa3.38□□□□□ -1.87
VMA5YKL080W YMR155WQ03795 547 aa3.38□□□□□ -1.87
VMA5YKL080W RTN2Q12443 393 aa3.38□□□□□ -1.87
VMA5YKL080W YJR112W-AQ3E743 109 aa3.38□□□□□ -1.87
VMA5YKL080W CBP1P07252 654 aa3.37□□□□□ -1.87
VMA5YKL080W YML003WP0CF16 290 aa3.37□□□□□ -1.87
VMA5YKL080W CBS1P14066 229 aa3.37□□□□□ -1.87
VMA5YKL080W YCK1P23291 538 aa3.37□□□□□ -1.87
VMA5YKL080W MDL1P33310 695 aa3.37□□□□□ -1.87
VMA5YKL080W UBP11P36026 717 aa3.37□□□□□ -1.87
VMA5YKL080W RTS1P38903 757 aa3.37□□□□□ -1.87
VMA5YKL080W GDI1P39958 451 aaKnown RBP3.37□□□□□ -1.87
VMA5YKL080W RGI2P40188 164 aa3.37□□□□□ -1.87
VMA5YKL080W ASG1P40467 964 aa3.37□□□□□ -1.87
VMA5YKL080W SPO22P40511 975 aa3.37□□□□□ -1.87
VMA5YKL080W TIM10P87108 93 aa3.37□□□□□ -1.87
VMA5YKL080W SWA2Q06677 668 aa3.37□□□□□ -1.87
VMA5YKL080W TMA16Q08687 178 aa3.37□□□□□ -1.87
VMA5YKL080W RIM20Q12033 661 aa3.37□□□□□ -1.87
VMA5YKL080W PCD1Q12524 340 aa3.37□□□□□ -1.87
VMA5YKL080W VCX1Q99385 411 aa3.37□□□□□ -1.87
VMA5YKL080W YBR085C-AO43137 85 aa3.36□□□□□ -1.87
VMA5YKL080W MET17P06106 444 aa3.36□□□□□ -1.87
VMA5YKL080W PCT1P13259 424 aa3.36□□□□□ -1.87
VMA5YKL080W VMA2P16140 517 aaKnown RBP3.36□□□□□ -1.87
VMA5YKL080W TPM1P17536 199 aaKnown RBP3.36□□□□□ -1.87
VMA5YKL080W ERG8P24521 451 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms