RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W MSN4P33749 630 aa3.8□□□□□ -1.8
NUP85YJR042W PMT1P33775 817 aa3.8□□□□□ -1.8
NUP85YJR042W LTV1P34078 463 aa3.8□□□□□ -1.8
NUP85YJR042W AUR1P36107 401 aaPredicted RBP3.8□□□□□ -1.8
NUP85YJR042W MRPL36P36531 177 aa3.8□□□□□ -1.8
NUP85YJR042W CCL1P37366 393 aa3.8□□□□□ -1.8
NUP85YJR042W ETP1P38748 585 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W CRG1P38892 291 aaRIP-Chip data3.8□□□□□ -1.8not detected
NUP85YJR042W AIM10P39965 576 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W SCC4P40090 624 aa3.8□□□□□ -1.8
NUP85YJR042W IAH1P41734 238 aa3.8□□□□□ -1.8
NUP85YJR042W TAH11P47112 604 aa3.8□□□□□ -1.8
NUP85YJR042W YGR130CP53278 816 aa3.8□□□□□ -1.8
NUP85YJR042W SDH1Q00711 640 aa3.8□□□□□ -1.8
NUP85YJR042W INP2Q03824 705 aa3.8□□□□□ -1.8
NUP85YJR042W RGC1Q06108 1083 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W ECM7Q06200 448 aa3.8□□□□□ -1.8
NUP85YJR042W GSH2Q08220 491 aa3.8□□□□□ -1.8
NUP85YJR042W ULA1Q12059 462 aa3.8□□□□□ -1.8
NUP85YJR042W YRF1-3P0CX14 1859 aa3.8□□□□□ -1.8
NUP85YJR042W YRF1-7P0CX15 1859 aa3.8□□□□□ -1.8
NUP85YJR042W RFA1P22336 621 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W MRP4P32902 394 aa3.8□□□□□ -1.8
NUP85YJR042W SEC66P33754 206 aa3.8□□□□□ -1.8
NUP85YJR042W WBP1P33767 430 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W YBL029WP38201 376 aa3.8□□□□□ -1.8
NUP85YJR042W YJL070CP40361 888 aa3.8□□□□□ -1.8
NUP85YJR042W YGR111WP53265 400 aa3.8□□□□□ -1.8
NUP85YJR042W YRF1-6P53819 1859 aa3.8□□□□□ -1.8
NUP85YJR042W SNZ1Q03148 297 aa3.8□□□□□ -1.8
NUP85YJR042W YDR444WQ04093 687 aa3.8□□□□□ -1.8
NUP85YJR042W STE23Q06010 1027 aa3.8□□□□□ -1.8
NUP85YJR042W YPR196WQ06595 470 aa3.8□□□□□ -1.8
NUP85YJR042W MDM36Q06820 579 aa3.8□□□□□ -1.8
NUP85YJR042W YPL277CQ08989 487 aa3.8□□□□□ -1.8
NUP85YJR042W SLM3Q12093 417 aa3.8□□□□□ -1.8
NUP85YJR042W ATP2P00830 511 aaKnown RBP3.79□□□□□ -1.8
NUP85YJR042W DFR1P07807 211 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
NUP85YJR042W PRP4P20053 465 aaKnown RBP3.79□□□□□ -1.8
NUP85YJR042W RPL5P26321 297 aaKnown RBP3.79□□□□□ -1.8
NUP85YJR042W PAP1P29468 568 aaKnown RBP3.79□□□□□ -1.8
NUP85YJR042W ACP1P32463 125 aa3.79□□□□□ -1.8
NUP85YJR042W YKR075CP36155 307 aa3.79□□□□□ -1.8
NUP85YJR042W NPA3P47122 385 aa3.79□□□□□ -1.8
NUP85YJR042W UTP6Q02354 440 aaKnown RBP3.79□□□□□ -1.8
NUP85YJR042W ATG29Q12092 213 aa3.79□□□□□ -1.8
NUP85YJR042W NBP2Q12163 236 aa3.79□□□□□ -1.8
NUP85YJR042W ARG82P07250 355 aa3.79□□□□□ -1.8
NUP85YJR042W PET122P10355 254 aa3.79□□□□□ -1.8
NUP85YJR042W FAA1P30624 700 aaKnown RBP3.79□□□□□ -1.8
NUP85YJR042W RML2P32611 393 aa3.79□□□□□ -1.8
NUP85YJR042W MNN2P38069 597 aa3.79□□□□□ -1.8
NUP85YJR042W MAL33P38157 468 aa3.79□□□□□ -1.8
NUP85YJR042W TDP1P38319 544 aa3.79□□□□□ -1.8
NUP85YJR042W LIN1P38852 340 aaPredicted RBP3.79□□□□□ -1.8
NUP85YJR042W FTR1P40088 404 aa3.79□□□□□ -1.8
NUP85YJR042W AIM20P40451 204 aa3.79□□□□□ -1.8
NUP85YJR042W ASE1P50275 885 aa3.79□□□□□ -1.8
NUP85YJR042W NCS6P53088 359 aa3.79□□□□□ -1.8
NUP85YJR042W PIB2P53191 635 aa3.79□□□□□ -1.8
NUP85YJR042W TIM21P53220 239 aa3.79□□□□□ -1.8
NUP85YJR042W LSC1P53598 329 aaKnown RBP3.79□□□□□ -1.8
NUP85YJR042W SMA1Q02651 245 aa3.79□□□□□ -1.8
NUP85YJR042W TY1A-DR2Q03964 440 aaKnown RBP3.79□□□□□ -1.8
NUP85YJR042W SMA2Q04658 369 aa3.79□□□□□ -1.8
NUP85YJR042W GPN2Q08726 347 aaPredicted RBP3.79□□□□□ -1.8
NUP85YJR042W HOS1Q12214 470 aa3.79□□□□□ -1.8
NUP85YJR042W PRS5Q12265 496 aaKnown RBP3.79□□□□□ -1.8
NUP85YJR042W MRPL23Q12487 163 aaPredicted RBP3.79□□□□□ -1.8
NUP85YJR042W SUP35P05453 685 aaKnown RBP3.78□□□□□ -1.8
NUP85YJR042W GAL7P08431 366 aa3.78□□□□□ -1.8
NUP85YJR042W GCD1P09032 578 aaPredicted RBP3.78□□□□□ -1.8
NUP85YJR042W TAL1P15019 335 aaKnown RBP3.78□□□□□ -1.8
NUP85YJR042W APN2P38207 520 aa3.78□□□□□ -1.8
NUP85YJR042W REG2P38232 338 aa3.78□□□□□ -1.8
NUP85YJR042W SLM4P38247 162 aa3.78□□□□□ -1.8
NUP85YJR042W RSM25P40496 264 aa3.78□□□□□ -1.8
NUP85YJR042W BIT61P47041 543 aa3.78□□□□□ -1.8
NUP85YJR042W BPL1P48445 690 aaPredicted RBP3.78□□□□□ -1.8
NUP85YJR042W ARP5P53946 755 aa3.78□□□□□ -1.8
NUP85YJR042W KAP120Q02932 1032 aa3.78□□□□□ -1.8
NUP85YJR042W BOP2Q06150 570 aa3.78□□□□□ -1.8
NUP85YJR042W LDB17Q12342 491 aa3.78□□□□□ -1.8
NUP85YJR042W NDJ1Q12366 352 aa3.78□□□□□ -1.8
NUP85YJR042W VPS63O13549 108 aa3.78□□□□□ -1.8
NUP85YJR042W HXK2P04807 486 aaKnown RBP3.78□□□□□ -1.8
NUP85YJR042W SAM35P14693 329 aa3.78□□□□□ -1.8
NUP85YJR042W TUP1P16649 713 aa3.78□□□□□ -1.8
NUP85YJR042W MGM101P32787 269 aaKnown RBP3.78□□□□□ -1.8
NUP85YJR042W PHO11P35842 467 aa3.78□□□□□ -1.8
NUP85YJR042W PXL1P36166 706 aa3.78□□□□□ -1.8
NUP85YJR042W ATG14P38270 344 aa3.78□□□□□ -1.8
NUP85YJR042W COS111P38308 924 aa3.78□□□□□ -1.8
NUP85YJR042W MSG5P38590 489 aa3.78□□□□□ -1.8
NUP85YJR042W PHO12P38693 467 aa3.78□□□□□ -1.8
NUP85YJR042W YHL017WP38745 532 aa3.78□□□□□ -1.8
NUP85YJR042W GIP2P40036 548 aa3.78□□□□□ -1.8
NUP85YJR042W MAF1P41910 395 aa3.78□□□□□ -1.8
NUP85YJR042W DLD2P46681 530 aaKnown RBP3.78□□□□□ -1.8
NUP85YJR042W CTK2P46962 323 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms