RNA–Protein interactions for RNA: YJR036C

HUL4, Transcript of Protein with similarity to hect domain E3 ubiquitin-protein ligases, yeast

Gene HUL4, Length 2,679 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HUL4	YJR036C	RDR1	Q08904	546 aa		4.58	□□□□□ -1.68
HUL4	YJR036C	URA3	P03962	267 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
HUL4	YJR036C	LRG1	P35688	1017 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	CHK1	P38147	527 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	ASG1	P40467	964 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	FET4	P40988	552 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	SNZ3	P43545	298 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	PET130	P47065	347 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	EMC2	P47133	292 aa	Known RBP	4.57	□□□□□ -1.68
HUL4	YJR036C	MND1	P53102	219 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	SNZ2	P53824	298 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	WAR1	Q03631	944 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	ATC1	Q04005	294 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	THI22	Q06490	572 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	DCI1	Q08558	271 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	THI21	Q08975	551 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	SRO7	Q12038	1033 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	YJR112W-A	Q3E743	109 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	MON2	P48563	1636 aa	Predicted RBP	4.57	□□□□□ -1.68
HUL4	YJR036C	TY1B-DR4	Q07793	1604 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	RPL6B	P05739	176 aa	Known RBP	4.57	□□□□□ -1.68
HUL4	YJR036C	TPK2	P06245	380 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	MSS116	P15424	664 aa	Known RBP	4.57	□□□□□ -1.68
HUL4	YJR036C	VPS33	P20795	691 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	ARG1	P22768	420 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	YPT7	P32939	208 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	MRPL4	P36517	319 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	KAP104	P38217	918 aa	Known RBP	4.57	□□□□□ -1.68
HUL4	YJR036C	YHR045W	P38775	560 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	AFG3	P39925	761 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	PEF1	P53238	335 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	SQS1	P53866	767 aa	Known RBP	4.57	□□□□□ -1.68
HUL4	YJR036C	RPL6A	Q02326	176 aa	Known RBP	4.57	□□□□□ -1.68
HUL4	YJR036C	SKI8	Q02793	397 aa	Predicted RBP	4.57	□□□□□ -1.68
HUL4	YJR036C	PPM1	Q04081	328 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	GTO3	Q04806	366 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	RSB1	Q08417	382 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	BUD7	Q08754	746 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	VIK1	Q12045	647 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	RAD61	Q99359	647 aa		4.57	□□□□□ -1.68
HUL4	YJR036C	KIN2	P13186	1147 aa	Known RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	UGA1	P17649	471 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	CHL1	P22516	861 aa	Predicted RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	PRE8	P23639	250 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	RML2	P32611	393 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	ALY1	P36117	915 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	YKR078W	P36158	585 aa	Known RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	SLM4	P38247	162 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	TOS1	P38288	455 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	SHU2	P38957	223 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	JHD1	P40034	492 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	ADY4	Q05955	493 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	CRD1	Q07560	283 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	RKM1	Q08961	583 aa	Predicted RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	NBL1	Q3E7Y6	73 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	YPR089W	O13585	888 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	TRP3	P00937	484 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	RPS17A	P02407	136 aa	Known RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	RPS17B	P14127	136 aa	Known RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	SAG1	P20840	650 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	OSM1	P21375	501 aa	Known RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	RPS5	P26783	225 aa	Known RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	HXT3	P32466	567 aa	Known RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	SIP1	P32578	815 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	PMT1	P33775	817 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	YNR065C	P53751	1116 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	MUK1	Q02866	612 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	RPN9	Q04062	393 aa	Known RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	ECM11	Q04110	302 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	RTT109	Q07794	436 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	GPN2	Q08726	347 aa	Predicted RBP	4.56	□□□□□ -1.68
HUL4	YJR036C	DSE3	Q08729	430 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	PUS9	Q12069	462 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	NBP2	Q12163	236 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	TY1A-DR3	Q12441	440 aa		4.56	□□□□□ -1.68
HUL4	YJR036C	CFT1	Q06632	1357 aa	Known RBP	4.55	□□□□□ -1.68
HUL4	YJR036C	FUS1	P11710	512 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	PET18	P25362	215 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	PRP45	P28004	379 aa	Predicted RBP	4.55	□□□□□ -1.68
HUL4	YJR036C	WBP1	P33767	430 aa	Known RBP	4.55	□□□□□ -1.68
HUL4	YJR036C	YBL029W	P38201	376 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	CDS1	P38221	457 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	SIC1	P38634	284 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	PCL6	P40038	420 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	JJJ2	P46997	583 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	RIB4	P50861	169 aa	Predicted RBP	4.55	□□□□□ -1.68
HUL4	YJR036C	TWF1	P53250	332 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	ENT5	Q03769	411 aa	Known RBP	4.55	□□□□□ -1.68
HUL4	YJR036C	RIM13	Q03792	727 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	VPS38	Q05919	439 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	SDO1	Q07953	250 aa	Known RBP	4.55	□□□□□ -1.68
HUL4	YJR036C	GET4	Q12125	312 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	ATG11	Q12527	1178 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	YLR302C	O13544	120 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	POL30	P15873	258 aa	Known RBP	4.55	□□□□□ -1.68
HUL4	YJR036C	PEX3	P28795	441 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	MRT4	P33201	236 aa	Known RBP	4.55	□□□□□ -1.68
HUL4	YJR036C	MKS1	P34072	584 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	AUR1	P36107	401 aa	Predicted RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms