RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	SEC12	P11655	471 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	HMG2	P12684	1045 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	ARO3	P14843	370 aa	Known RBP	4.37	□□□□□ -1.71
CDC6	YJL194W	CRM1	P30822	1084 aa	Known RBP	4.37	□□□□□ -1.71
CDC6	YJL194W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
CDC6	YJL194W	PMT1	P33775	817 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	HCS1	P34243	683 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	ECM21	P38167	1117 aa	Known RBP	4.37	□□□□□ -1.71
CDC6	YJL194W	MNN9	P39107	395 aa	Known RBP	4.37	□□□□□ -1.71
CDC6	YJL194W	UTP18	P40362	594 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC6	YJL194W	CTR1	P49573	406 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	RMD9	P53140	646 aa	Known RBP	4.37	□□□□□ -1.71
CDC6	YJL194W	TWF1	P53250	332 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	ORC3	P54790	616 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	SEG1	Q04279	960 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	CSI1	Q04368	295 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	YLR297W	Q05899	129 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	VCX1	Q99385	411 aa		4.37	□□□□□ -1.71
CDC6	YJL194W	THO2	P53552	1597 aa	Known RBP	4.37	□□□□□ -1.71
CDC6	YJL194W	GAL80	P04387	435 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	EMC1	P25574	760 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	PRP45	P28004	379 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	HSP104	P31539	908 aa	Known RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	ASF2	P32448	525 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	MSN4	P33749	630 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	YBL055C	P34220	418 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	PHO11	P35842	467 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	AGP2	P38090	596 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	SLM4	P38247	162 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	PHO12	P38693	467 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	PTC7	P38797	343 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	SSO2	P39926	295 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	AIM20	P40451	204 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	MAF1	P41910	395 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	HXT14	P42833	540 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	SSY5	P47002	699 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	INP52	P50942	1183 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	YNL143C	P53908	130 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	YNL050C	P53952	270 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	SSY1	Q03770	852 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	RPN9	Q04062	393 aa	Known RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	RTN1	Q04947	295 aa	Known RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	SSQ1	Q05931	657 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	AIM6	Q07716	390 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	RCL1	Q08096	367 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	LDB17	Q12342	491 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	MED4	Q12343	284 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	AHC1	Q12433	566 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	SRB8	P25648	1427 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	ERG20	P08524	352 aa	Known RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	SRV2	P17555	526 aa	Known RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	IME1	P21190	360 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	YIH1	P25637	258 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	CDC15	P27636	974 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	AFG1	P32317	509 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	YME2	P32843	850 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	OMA1	P36163	345 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	MRPL4	P36517	319 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	SFB3	P38810	929 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	BZZ1	P38822	633 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	NUP60	P39705	539 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	PET130	P47065	347 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	YGL242C	P53066	181 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	INN1	P53901	409 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	REX2	P54964	269 aa	Known RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	SDH1	Q00711	640 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	RCR2	Q03446	210 aa	Known RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	RRB1	Q04225	511 aa	Known RBP	4.36	□□□□□ -1.71
CDC6	YJL194W	ECM7	Q06200	448 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	AIM41	Q12032	185 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	BUG1	Q12191	341 aa		4.36	□□□□□ -1.71
CDC6	YJL194W	RPS9B	P05755	195 aa	Known RBP	4.35	□□□□□ -1.71
CDC6	YJL194W	HIP1	P06775	603 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	GPA1	P08539	472 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	SAM1	P10659	382 aa	Known RBP	4.35	□□□□□ -1.71
CDC6	YJL194W	RME1	P32338	300 aa	Known RBP	4.35	□□□□□ -1.71
CDC6	YJL194W	MEI5	P32489	222 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	SUA5	P32579	426 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	TPO5	P36029	618 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	ECM4	P36156	370 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	APT2	P36973	181 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	NTC20	P38302	140 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC6	YJL194W	MSG5	P38590	489 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	SIP3	P38717	1229 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
CDC6	YJL194W	GTS1	P40956	396 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	VMA13	P41807	478 aa	Known RBP	4.35	□□□□□ -1.71
CDC6	YJL194W	IME4	P41833	600 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	ELP2	P42935	788 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	YJL107C	P42947	387 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	RPA34	P47006	233 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC6	YJL194W	APT1	P49435	187 aa	Known RBP	4.35	□□□□□ -1.71
CDC6	YJL194W	COX18	P53239	316 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	HEF3	P53978	1044 aa	Known RBP	4.35	□□□□□ -1.71
CDC6	YJL194W	VPS20	Q04272	221 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	CRF1	Q04930	467 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	STP3	Q05937	343 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	YLR455W	Q06188	304 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	VAC14	Q06708	880 aa		4.35	□□□□□ -1.71
CDC6	YJL194W	UAF30	Q08747	228 aa		4.35	□□□□□ -1.71

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