RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W CDC24P11433 854 aaPredicted RBP2.36□□□□□ -2.03
MSL1YIR009W HNM1P19807 563 aa2.36□□□□□ -2.03
MSL1YIR009W PRE8P23639 250 aa2.36□□□□□ -2.03
MSL1YIR009W ERG8P24521 451 aa2.36□□□□□ -2.03
MSL1YIR009W SGF29P25554 259 aa2.36□□□□□ -2.03
MSL1YIR009W MRP20P32387 263 aa2.36□□□□□ -2.03
MSL1YIR009W CBF2P32504 956 aa2.36□□□□□ -2.03
MSL1YIR009W ALY1P36117 915 aa2.36□□□□□ -2.03
MSL1YIR009W YBL029WP38201 376 aa2.36□□□□□ -2.03
MSL1YIR009W YBR225WP38321 900 aa2.36□□□□□ -2.03
MSL1YIR009W PFK26P40433 827 aaKnown RBP2.36□□□□□ -2.03
MSL1YIR009W DSD1P53095 428 aa2.36□□□□□ -2.03
MSL1YIR009W LCL3P53153 274 aa2.36□□□□□ -2.03
MSL1YIR009W CUL3P53202 744 aa2.36□□□□□ -2.03
MSL1YIR009W ADE16P54113 591 aaKnown RBP2.36□□□□□ -2.03
MSL1YIR009W YSA1Q01976 231 aa2.36□□□□□ -2.03
MSL1YIR009W BAG7Q12128 409 aa2.36□□□□□ -2.03
MSL1YIR009W ERG27Q12452 347 aaKnown RBP2.36□□□□□ -2.03
MSL1YIR009W MDS3P53094 1487 aa2.36□□□□□ -2.03
MSL1YIR009W ARG3P05150 338 aa2.35□□□□□ -2.03
MSL1YIR009W SEC53P07283 254 aaKnown RBP2.35□□□□□ -2.03
MSL1YIR009W MRP2P10663 115 aaPredicted RBP2.35□□□□□ -2.03
MSL1YIR009W RED1P14291 827 aa2.35□□□□□ -2.03
MSL1YIR009W YCK1P23291 538 aa2.35□□□□□ -2.03
MSL1YIR009W POL4P25615 582 aa2.35□□□□□ -2.03
MSL1YIR009W VMA8P32610 256 aaKnown RBP2.35□□□□□ -2.03
MSL1YIR009W PXA2P34230 853 aa2.35□□□□□ -2.03
MSL1YIR009W BYE1P36106 594 aa2.35□□□□□ -2.03
MSL1YIR009W AFG3P39925 761 aa2.35□□□□□ -2.03
MSL1YIR009W FMP10P40098 244 aa2.35□□□□□ -2.03
MSL1YIR009W YIL161WP40449 235 aaKnown RBP2.35□□□□□ -2.03
MSL1YIR009W GPD2P41911 440 aaKnown RBP2.35□□□□□ -2.03
MSL1YIR009W SGM1P47166 707 aa2.35□□□□□ -2.03
MSL1YIR009W ARE2P53629 642 aaKnown RBP2.35□□□□□ -2.03
MSL1YIR009W YNR061CP53747 219 aa2.35□□□□□ -2.03
MSL1YIR009W YNL181WP53878 407 aa2.35□□□□□ -2.03
MSL1YIR009W FCP1Q03254 732 aa2.35□□□□□ -2.03
MSL1YIR009W TAF11Q04226 346 aa2.35□□□□□ -2.03
MSL1YIR009W IMH1Q06704 911 aaKnown RBP2.35□□□□□ -2.03
MSL1YIR009W GRC3Q07845 632 aa2.35□□□□□ -2.03
MSL1YIR009W NUS1Q12063 375 aa2.35□□□□□ -2.03
MSL1YIR009W TIP41Q12199 356 aa2.35□□□□□ -2.03
MSL1YIR009W YOR019WQ99248 730 aa2.35□□□□□ -2.03
MSL1YIR009W GCN4P03069 281 aa2.34□□□□□ -2.03
MSL1YIR009W SPO16P17122 198 aa2.34□□□□□ -2.03
MSL1YIR009W YSP3P25036 478 aa2.34□□□□□ -2.03
MSL1YIR009W STE50P25344 346 aa2.34□□□□□ -2.03
MSL1YIR009W MGR1P25573 417 aa2.34□□□□□ -2.03
MSL1YIR009W RAD24P32641 659 aa2.34□□□□□ -2.03
MSL1YIR009W RTS1P38903 757 aa2.34□□□□□ -2.03
MSL1YIR009W DHH1P39517 506 aaKnown RBP2.34□□□□□ -2.03
MSL1YIR009W NPR2P39923 615 aa2.34□□□□□ -2.03
MSL1YIR009W YJL070CP40361 888 aa2.34□□□□□ -2.03
MSL1YIR009W DOT5P40553 215 aa2.34□□□□□ -2.03
MSL1YIR009W DJP1P40564 432 aa2.34□□□□□ -2.03
MSL1YIR009W ARF3P40994 183 aaRIP-Chip data2.34□□□□□ -2.03not detected
MSL1YIR009W MRX6P48564 524 aa2.34□□□□□ -2.03
MSL1YIR009W ASE1P50275 885 aa2.34□□□□□ -2.03
MSL1YIR009W IMP4P53941 290 aaKnown RBP2.34□□□□□ -2.03
MSL1YIR009W CRZ1P53968 678 aa2.34□□□□□ -2.03
MSL1YIR009W ASI1P54074 624 aa2.34□□□□□ -2.03
MSL1YIR009W ERO1Q03103 563 aa2.34□□□□□ -2.03
MSL1YIR009W MTG1Q03151 367 aaPredicted RBP2.34□□□□□ -2.03
MSL1YIR009W NGL3Q03210 505 aa2.34□□□□□ -2.03
MSL1YIR009W YMR155WQ03795 547 aa2.34□□□□□ -2.03
MSL1YIR009W UTP21Q06078 939 aaPredicted RBP2.34□□□□□ -2.03
MSL1YIR009W YLR352WQ06479 807 aa2.34□□□□□ -2.03
MSL1YIR009W VAM6Q07468 1049 aa2.34□□□□□ -2.03
MSL1YIR009W MYO2P19524 1574 aaKnown RBP2.33□□□□□ -2.04
MSL1YIR009W RPB2P08518 1224 aaKnown RBP2.33□□□□□ -2.04
MSL1YIR009W BAR1P12630 587 aa2.33□□□□□ -2.04
MSL1YIR009W CKA1P15790 372 aa2.33□□□□□ -2.04
MSL1YIR009W OLE1P21147 510 aaKnown RBP2.33□□□□□ -2.04
MSL1YIR009W OPI1P21957 404 aa2.33□□□□□ -2.04
MSL1YIR009W RFA2P26754 273 aaKnown RBP2.33□□□□□ -2.04
MSL1YIR009W DBF4P32325 704 aa2.33□□□□□ -2.04
MSL1YIR009W SWI3P32591 825 aa2.33□□□□□ -2.04
MSL1YIR009W YBR139WP38109 508 aa2.33□□□□□ -2.04
MSL1YIR009W MAL33P38157 468 aa2.33□□□□□ -2.04
MSL1YIR009W REG2P38232 338 aa2.33□□□□□ -2.04
MSL1YIR009W IRC6P43615 237 aa2.33□□□□□ -2.04
MSL1YIR009W RMD8P43620 662 aa2.33□□□□□ -2.04
MSL1YIR009W ARC1P46672 376 aaKnown RBP2.33□□□□□ -2.04
MSL1YIR009W SIP4P46954 829 aa2.33□□□□□ -2.04
MSL1YIR009W ATG27P46989 271 aa2.33□□□□□ -2.04
MSL1YIR009W CSL4P53859 292 aaPredicted RBP2.33□□□□□ -2.04
MSL1YIR009W SMA1Q02651 245 aa2.33□□□□□ -2.04
MSL1YIR009W SWT1Q12104 458 aa2.33□□□□□ -2.04
MSL1YIR009W YLR049CQ12110 428 aa2.33□□□□□ -2.04
MSL1YIR009W SCM3Q12334 223 aa2.33□□□□□ -2.04
MSL1YIR009W YML003WP0CF16 290 aa2.32□□□□□ -2.04
MSL1YIR009W YML002WP0CF17 737 aa2.32□□□□□ -2.04
MSL1YIR009W RPL19AP0CX82 189 aaKnown RBP2.32□□□□□ -2.04
MSL1YIR009W RPL19BP0CX83 189 aaPredicted RBP2.32□□□□□ -2.04
MSL1YIR009W BIK1P11709 440 aa2.32□□□□□ -2.04
MSL1YIR009W CBS1P14066 229 aa2.32□□□□□ -2.04
MSL1YIR009W PMS1P14242 873 aa2.32□□□□□ -2.04
MSL1YIR009W RPN2P32565 945 aaKnown RBP2.32□□□□□ -2.04
MSL1YIR009W SAC6P32599 642 aaKnown RBP2.32□□□□□ -2.04
MSL1YIR009W NOP4P37838 685 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms