RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	SMI1	P32566	505 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	SAC6	P32599	642 aa	Known RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	GCS1	P35197	352 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	HSM3	P38348	480 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	IMD2	P38697	523 aa	Known RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	LAS21	P40367	830 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	ARC1	P46672	376 aa	Known RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	AAD10	P47182	288 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	IMD3	P50095	523 aa	Known RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	MRK1	P50873	501 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	DUO1	P53168	247 aa	Known RBP	3.42	□□□□□ -1.86
NDC80	YIL144W	YPR003C	P53394	754 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	YAT1	P80235	687 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	PHO92	Q06390	306 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	CRN1	Q06440	651 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	ARV1	Q06541	321 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	YPL272C	Q08984	517 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	PLP2	Q12017	286 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	SKS1	Q12505	502 aa		3.42	□□□□□ -1.86
NDC80	YIL144W	HNM1	P19807	563 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	YCK1	P23291	538 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	MGM1	P32266	881 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	UTP9	P38882	575 aa	Known RBP	3.41	□□□□□ -1.86
NDC80	YIL144W	ERV46	P39727	415 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	FUN12	P39730	1002 aa	Known RBP	3.41	□□□□□ -1.86
NDC80	YIL144W	SEC24	P40482	926 aa	Known RBP	3.41	□□□□□ -1.86
NDC80	YIL144W	IME4	P41833	600 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	AGX1	P43567	385 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	YNR068C	P53754	272 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	AIM32	Q04689	311 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
NDC80	YIL144W	BAG7	Q12128	409 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	YOL159C-A	Q3E769	90 aa		3.41	□□□□□ -1.86
NDC80	YIL144W	ADE5,7	P07244	802 aa	Known RBP	3.4	□□□□□ -1.86
NDC80	YIL144W	OM45	P16547	393 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	LCB1	P25045	558 aa	Known RBP	3.4	□□□□□ -1.86
NDC80	YIL144W	CAB3	P36076	571 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	SIF2	P38262	535 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	JHD1	P40034	492 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	CDC1	P40986	491 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	MRX6	P48564	524 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	TOF1	P53840	1238 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	PRO2	P54885	456 aa	Known RBP	3.4	□□□□□ -1.86
NDC80	YIL144W	GYL1	Q04322	720 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	ERB1	Q04660	807 aa	Known RBP	3.4	□□□□□ -1.86
NDC80	YIL144W	RSF1	Q05043	376 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	YOL159C	Q08300	171 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	GRX6	Q12438	231 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	ERG27	Q12452	347 aa	Known RBP	3.4	□□□□□ -1.86
NDC80	YIL144W	SPE4	Q12455	300 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	SKM1	Q12469	655 aa		3.4	□□□□□ -1.86
NDC80	YIL144W	RPN13	O13563	156 aa		3.4	□□□□□ -1.87
NDC80	YIL144W	CDC24	P11433	854 aa	Predicted RBP	3.4	□□□□□ -1.87
NDC80	YIL144W	PTC6	P25646	442 aa		3.4	□□□□□ -1.87
NDC80	YIL144W	GYP6	P32806	458 aa		3.4	□□□□□ -1.87
NDC80	YIL144W	UBP13	P38187	747 aa		3.4	□□□□□ -1.87
NDC80	YIL144W	DSD1	P53095	428 aa		3.4	□□□□□ -1.87
NDC80	YIL144W	ART5	P53244	586 aa	Known RBP	3.4	□□□□□ -1.87
NDC80	YIL144W	RPT6	Q01939	405 aa	Known RBP	3.4	□□□□□ -1.87
NDC80	YIL144W	ECM22	Q05958	814 aa	Predicted RBP	3.4	□□□□□ -1.87
NDC80	YIL144W	PET111	P08468	800 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	SPB1	P25582	841 aa	Predicted RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	GSY2	P27472	705 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	NIP1	P32497	812 aa	Known RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	MIC60	P36112	540 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	NTR2	P36118	322 aa	Predicted RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	OSW5	P40219	148 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	LAM5	P43560	674 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	FET5	P43561	622 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	AIP1	P46680	615 aa	Known RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	RAD17	P48581	401 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	KEL2	P50090	882 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	CWC21	Q03375	135 aa	Known RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	RPC11	Q04307	110 aa	Predicted RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	GET3	Q12154	354 aa	Known RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	PSY3	Q12318	242 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	BNR1	P40450	1375 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	DBP3	P20447	523 aa	Known RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	STB6	P36085	766 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	AAP1	P37898	856 aa	Known RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	MNN2	P38069	597 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	PCH2	P38126	564 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	TAX4	P47030	604 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	UBX6	P47049	396 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	EOS1	P53938	366 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	DBP9	Q06218	594 aa	Known RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	CTI6	Q08923	506 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	LEA1	Q08963	238 aa	Predicted RBP	3.39	□□□□□ -1.87
NDC80	YIL144W	NUS1	Q12063	375 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	NMD4	Q12129	218 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	NBP2	Q12163	236 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	YLR111W	Q12528	110 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	YOR111W	Q99210	232 aa		3.39	□□□□□ -1.87
NDC80	YIL144W	SEC53	P07283	254 aa	Known RBP	3.38	□□□□□ -1.87
NDC80	YIL144W	CHO1	P08456	276 aa		3.38	□□□□□ -1.87
NDC80	YIL144W	HEM1	P09950	548 aa	Predicted RBP	3.38	□□□□□ -1.87
NDC80	YIL144W	CLB1	P24868	471 aa		3.38	□□□□□ -1.87
NDC80	YIL144W	RPC34	P32910	317 aa		3.38	□□□□□ -1.87
NDC80	YIL144W	CTM1	P38818	585 aa		3.38	□□□□□ -1.87
NDC80	YIL144W	PHM8	P40025	321 aa		3.38	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms