RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W ECM11Q04110 302 aa5.36□□□□□ -1.55
PDE1YGL248W CRF1Q04930 467 aa5.36□□□□□ -1.55
PDE1YGL248W CUR1Q06469 252 aa5.36□□□□□ -1.55
PDE1YGL248W GSH2Q08220 491 aa5.36□□□□□ -1.55
PDE1YGL248W PUS7Q08647 676 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W NUS1Q12063 375 aa5.36□□□□□ -1.55
PDE1YGL248W RIO1Q12196 484 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W PTC5Q12511 572 aa5.36□□□□□ -1.55
PDE1YGL248W SEC3P33332 1336 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W RTC1Q08281 1341 aa5.36□□□□□ -1.55
PDE1YGL248W YLR278CQ05854 1341 aa5.35□□□□□ -1.55
PDE1YGL248W HXK2P04807 486 aaKnown RBP5.35□□□□□ -1.55
PDE1YGL248W RPL11AP0C0W9 174 aaKnown RBP5.35□□□□□ -1.55
PDE1YGL248W DAL81P21657 970 aa5.35□□□□□ -1.55
PDE1YGL248W GEX1P25596 615 aa5.35□□□□□ -1.55
PDE1YGL248W ARP2P32381 391 aaKnown RBP5.35□□□□□ -1.55
PDE1YGL248W NEM1P38757 446 aa5.35□□□□□ -1.55
PDE1YGL248W YHR182WP38870 785 aa5.35□□□□□ -1.55
PDE1YGL248W AFG3P39925 761 aa5.35□□□□□ -1.55
PDE1YGL248W SCC4P40090 624 aa5.35□□□□□ -1.55
PDE1YGL248W SHQ1P40486 507 aaPredicted RBP5.35□□□□□ -1.55
PDE1YGL248W VMA13P41807 478 aaKnown RBP5.35□□□□□ -1.55
PDE1YGL248W SHR5P41912 237 aa5.35□□□□□ -1.55
PDE1YGL248W SLS1P42900 643 aa5.35□□□□□ -1.55
PDE1YGL248W MRK1P50873 501 aa5.35□□□□□ -1.55
PDE1YGL248W COG1P53079 417 aa5.35□□□□□ -1.55
PDE1YGL248W RHO5P53879 331 aaKnown RBP5.35□□□□□ -1.55
PDE1YGL248W PET117Q02771 107 aa5.35□□□□□ -1.55
PDE1YGL248W ATG21Q02887 496 aa5.35□□□□□ -1.55
PDE1YGL248W RLI1Q03195 608 aaKnown RBP5.35□□□□□ -1.55
PDE1YGL248W FUS2Q05670 677 aa5.35□□□□□ -1.55
PDE1YGL248W GPB1Q08886 897 aa5.35□□□□□ -1.55
PDE1YGL248W RPL11BQ3E757 174 aaPredicted RBP5.35□□□□□ -1.55
PDE1YGL248W VPS63O13549 108 aa5.34□□□□□ -1.55
PDE1YGL248W SSA3P09435 649 aaKnown RBP5.34□□□□□ -1.55
PDE1YGL248W CDC23P16522 626 aa5.34□□□□□ -1.55
PDE1YGL248W PET18P25362 215 aa5.34□□□□□ -1.55
PDE1YGL248W NDI1P32340 513 aa5.34□□□□□ -1.55
PDE1YGL248W MF(ALPHA)2P32435 120 aa5.34□□□□□ -1.55
PDE1YGL248W YBL055CP34220 418 aaPredicted RBP5.34□□□□□ -1.55
PDE1YGL248W OCT1P35999 772 aa5.34□□□□□ -1.55
PDE1YGL248W YKL070WP36087 169 aa5.34□□□□□ -1.55
PDE1YGL248W RRT2P38332 387 aa5.34□□□□□ -1.55
PDE1YGL248W BEM4P39011 633 aa5.34□□□□□ -1.55
PDE1YGL248W DOT5P40553 215 aa5.34□□□□□ -1.55
PDE1YGL248W ELP2P42935 788 aa5.34□□□□□ -1.55
PDE1YGL248W RPA34P47006 233 aaPredicted RBP5.34□□□□□ -1.55
PDE1YGL248W EFM3P47163 339 aa5.34□□□□□ -1.55
PDE1YGL248W AAD10P47182 288 aa5.34□□□□□ -1.55
PDE1YGL248W APT1P49435 187 aaKnown RBP5.34□□□□□ -1.55
PDE1YGL248W MIG2P53035 382 aa5.34□□□□□ -1.55
PDE1YGL248W RMD9P53140 646 aaKnown RBP5.34□□□□□ -1.55
PDE1YGL248W PRM1P53835 661 aa5.34□□□□□ -1.55
PDE1YGL248W IVY1Q04934 453 aa5.34□□□□□ -1.55
PDE1YGL248W RQC1Q05468 723 aaKnown RBP5.34□□□□□ -1.55
PDE1YGL248W CRR1Q05790 422 aa5.34□□□□□ -1.55
PDE1YGL248W UAF30Q08747 228 aa5.34□□□□□ -1.55
PDE1YGL248W ATG29Q12092 213 aa5.34□□□□□ -1.55
PDE1YGL248W YOL107WQ12239 342 aa5.34□□□□□ -1.55
PDE1YGL248W YBR182C-AQ8TGU6 64 aa5.34□□□□□ -1.55
PDE1YGL248W RPS17AP02407 136 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W ARG81P05085 880 aa5.33□□□□□ -1.56
PDE1YGL248W CDC37P06101 506 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W SAM1P10659 382 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W RPS17BP14127 136 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W SEC15P22224 910 aa5.33□□□□□ -1.56
PDE1YGL248W FAA1P30624 700 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W NTH1P32356 751 aa5.33□□□□□ -1.56
PDE1YGL248W ATP11P32453 318 aa5.33□□□□□ -1.56
PDE1YGL248W GDH2P33327 1092 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W MRPL4P36517 319 aa5.33□□□□□ -1.56
PDE1YGL248W AIM3P38266 947 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W TAE1P38340 232 aa5.33□□□□□ -1.56
PDE1YGL248W TSL1P38427 1098 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W SEC31P38968 1273 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W YAR028WP39548 234 aa5.33□□□□□ -1.56
PDE1YGL248W ZRG8P40021 1076 aa5.33□□□□□ -1.56
PDE1YGL248W FMC1P40491 155 aa5.33□□□□□ -1.56
PDE1YGL248W OTU1P43558 301 aa5.33□□□□□ -1.56
PDE1YGL248W NET1P47035 1189 aa5.33□□□□□ -1.56
PDE1YGL248W GTO1P48239 356 aa5.33□□□□□ -1.56
PDE1YGL248W MNT2P53059 558 aa5.33□□□□□ -1.56
PDE1YGL248W PNC1P53184 216 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W YNR071CP53757 342 aa5.33□□□□□ -1.56
PDE1YGL248W MRPL22P53881 309 aa5.33□□□□□ -1.56
PDE1YGL248W YNL134CP53912 376 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W REG1Q00816 1014 aa5.33□□□□□ -1.56
PDE1YGL248W YMR102CQ03177 834 aa5.33□□□□□ -1.56
PDE1YGL248W GIM5Q04493 163 aa5.33□□□□□ -1.56
PDE1YGL248W YEH1Q07804 573 aa5.33□□□□□ -1.56
PDE1YGL248W NOP12Q08208 459 aaKnown RBP5.33□□□□□ -1.56
PDE1YGL248W LEA1Q08963 238 aaPredicted RBP5.33□□□□□ -1.56
PDE1YGL248W YPL260WQ08977 551 aa5.33□□□□□ -1.56
PDE1YGL248W YDL177CQ12257 170 aa5.33□□□□□ -1.56
PDE1YGL248W ATG11Q12527 1178 aa5.33□□□□□ -1.56
PDE1YGL248W YOS9Q99220 542 aa5.33□□□□□ -1.56
PDE1YGL248W YPR089WO13585 888 aa5.32□□□□□ -1.56
PDE1YGL248W CBP1P07252 654 aa5.32□□□□□ -1.56
PDE1YGL248W YAK1P14680 807 aa5.32□□□□□ -1.56
PDE1YGL248W FAR1P21268 830 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms