RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A GCD11P32481 527 aaKnown RBP9.12□□□□□ -0.95
LSB3YFR024C-A CYM1P32898 989 aa9.12□□□□□ -0.95
LSB3YFR024C-A YPT52P36018 234 aaKnown RBP9.12□□□□□ -0.95
LSB3YFR024C-A LTP1P40347 161 aa9.12□□□□□ -0.95
LSB3YFR024C-A FET5P43561 622 aa9.12□□□□□ -0.95
LSB3YFR024C-A YML096WQ04489 525 aa9.12□□□□□ -0.95
LSB3YFR024C-A KCS1Q12494 1050 aa9.12□□□□□ -0.95
LSB3YFR024C-A SEN1Q00416 2231 aaKnown RBP9.12□□□□□ -0.95
LSB3YFR024C-A GCY1P14065 312 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
LSB3YFR024C-A SNF5P18480 905 aa9.12□□□□□ -0.95
LSB3YFR024C-A RDS2P19541 446 aaKnown RBP9.12□□□□□ -0.95
LSB3YFR024C-A SEC14P24280 304 aaKnown RBP9.12□□□□□ -0.95
LSB3YFR024C-A SFP1P32432 683 aa9.12□□□□□ -0.95
LSB3YFR024C-A HSE1P38753 452 aa9.12□□□□□ -0.95
LSB3YFR024C-A YEL073CP39974 107 aa9.12□□□□□ -0.95
LSB3YFR024C-A CIS3P47001 227 aa9.12□□□□□ -0.95
LSB3YFR024C-A BOL2P53082 120 aa9.12□□□□□ -0.95
LSB3YFR024C-A BUD22Q04347 519 aaKnown RBP9.12□□□□□ -0.95
LSB3YFR024C-A STE23Q06010 1027 aa9.12□□□□□ -0.95
LSB3YFR024C-A ICT1Q12385 394 aa9.12□□□□□ -0.95
LSB3YFR024C-A ARG4P04076 463 aaPredicted RBP9.11□□□□□ -0.95
LSB3YFR024C-A SWI5P08153 709 aa9.11□□□□□ -0.95
LSB3YFR024C-A TRX2P22803 104 aaKnown RBP9.11□□□□□ -0.95
LSB3YFR024C-A THI80P35202 319 aa9.11□□□□□ -0.95
LSB3YFR024C-A EAP1P36041 632 aaKnown RBP9.11□□□□□ -0.95
LSB3YFR024C-A YHR020WP38708 688 aaKnown RBP9.11□□□□□ -0.95
LSB3YFR024C-A YHR182WP38870 785 aa9.11□□□□□ -0.95
LSB3YFR024C-A YAL037WP39728 267 aa9.11□□□□□ -0.95
LSB3YFR024C-A MEP1P40260 492 aa9.11□□□□□ -0.95
LSB3YFR024C-A HOS4P40480 1083 aa9.11□□□□□ -0.95
LSB3YFR024C-A YNL058CP53947 316 aa9.11□□□□□ -0.95
LSB3YFR024C-A YDR444WQ04093 687 aa9.11□□□□□ -0.95
LSB3YFR024C-A TAF11Q04226 346 aa9.11□□□□□ -0.95
LSB3YFR024C-A SSL1Q04673 461 aaPredicted RBP9.11□□□□□ -0.95
LSB3YFR024C-A RSC3Q06639 885 aa9.11□□□□□ -0.95
LSB3YFR024C-A ALR1Q08269 859 aa9.11□□□□□ -0.95
LSB3YFR024C-A VHS3Q08438 674 aa9.11□□□□□ -0.95
LSB3YFR024C-A MRH1Q12117 320 aaPredicted RBP9.11□□□□□ -0.95
LSB3YFR024C-A MCD1Q12158 566 aa9.11□□□□□ -0.95
LSB3YFR024C-A YMR030W-AQ3E760 96 aa9.11□□□□□ -0.95
LSB3YFR024C-A RGS2Q99188 309 aa9.11□□□□□ -0.95
LSB3YFR024C-A SEC53P07283 254 aaKnown RBP9.1□□□□□ -0.95
LSB3YFR024C-A RED1P14291 827 aa9.1□□□□□ -0.95
LSB3YFR024C-A PPH21P23594 369 aa9.1□□□□□ -0.95
LSB3YFR024C-A RSC6P25632 483 aa9.1□□□□□ -0.95
LSB3YFR024C-A LRG1P35688 1017 aa9.1□□□□□ -0.95
LSB3YFR024C-A RRP14P36080 434 aaKnown RBP9.1□□□□□ -0.95
LSB3YFR024C-A SET3P36124 751 aa9.1□□□□□ -0.95
LSB3YFR024C-A MRPL37P36532 105 aa9.1□□□□□ -0.95
LSB3YFR024C-A DED81P38707 554 aaKnown RBP9.1□□□□□ -0.95
LSB3YFR024C-A YHR045WP38775 560 aa9.1□□□□□ -0.95
LSB3YFR024C-A DMA1P38823 416 aa9.1□□□□□ -0.95
LSB3YFR024C-A BIO4P53630 237 aa9.1□□□□□ -0.95
LSB3YFR024C-A NHP10Q03435 203 aa9.1□□□□□ -0.95
LSB3YFR024C-A USA1Q03714 838 aa9.1□□□□□ -0.95
LSB3YFR024C-A HPT1Q04178 221 aaKnown RBP9.1□□□□□ -0.95
LSB3YFR024C-A BNA5Q05979 453 aa9.1□□□□□ -0.95
LSB3YFR024C-A SLP1Q12232 587 aa9.1□□□□□ -0.95
LSB3YFR024C-A YAR066WP0CX18 203 aa9.09□□□□□ -0.95
LSB3YFR024C-A YHR214WP0CX19 203 aa9.09□□□□□ -0.95
LSB3YFR024C-A RPL1AP0CX43 217 aaKnown RBP9.09□□□□□ -0.95
LSB3YFR024C-A RPL1BP0CX44 217 aaKnown RBP9.09□□□□□ -0.95
LSB3YFR024C-A PIM1P36775 1133 aa9.09□□□□□ -0.95
LSB3YFR024C-A EFM1P38732 585 aa9.09□□□□□ -0.95
LSB3YFR024C-A MUP3P38734 546 aa9.09□□□□□ -0.95
LSB3YFR024C-A GIM4P40005 111 aaKnown RBP9.09□□□□□ -0.95
LSB3YFR024C-A UTP18P40362 594 aaPredicted RBP9.09□□□□□ -0.95
LSB3YFR024C-A SSU1P41930 458 aa9.09□□□□□ -0.95
LSB3YFR024C-A GCD14P46959 383 aaPredicted RBP9.09□□□□□ -0.95
LSB3YFR024C-A EGD1Q02642 157 aaKnown RBP9.09□□□□□ -0.95
LSB3YFR024C-A UTP13Q05946 817 aaKnown RBP9.09□□□□□ -0.95
LSB3YFR024C-A RKM5Q12367 367 aa9.09□□□□□ -0.95
LSB3YFR024C-A MDM35O60200 86 aa9.08□□□□□ -0.96
LSB3YFR024C-A RPB4P20433 221 aaPredicted RBP9.08□□□□□ -0.96
LSB3YFR024C-A PHA2P32452 334 aa9.08□□□□□ -0.96
LSB3YFR024C-A MUD2P36084 527 aaKnown RBP9.08□□□□□ -0.96
LSB3YFR024C-A MPT5P39016 859 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
LSB3YFR024C-A YJL206CP39529 758 aa9.08□□□□□ -0.96
LSB3YFR024C-A ZIM17P42844 174 aa9.08□□□□□ -0.96
LSB3YFR024C-A GAT1P43574 510 aa9.08□□□□□ -0.96
LSB3YFR024C-A CLD1P53264 445 aa9.08□□□□□ -0.96
LSB3YFR024C-A CRN1Q06440 651 aa9.08□□□□□ -0.96
LSB3YFR024C-A UPC2Q12151 913 aa9.08□□□□□ -0.96
LSB3YFR024C-A PHO5P00635 467 aa9.07□□□□□ -0.96
LSB3YFR024C-A TRM1P15565 570 aaKnown RBP9.07□□□□□ -0.96
LSB3YFR024C-A ATP11P32453 318 aa9.07□□□□□ -0.96
LSB3YFR024C-A UBA4P38820 440 aa9.07□□□□□ -0.96
LSB3YFR024C-A PEP8P40335 379 aa9.07□□□□□ -0.96
LSB3YFR024C-A DUG1P43616 481 aaKnown RBP9.07□□□□□ -0.96
LSB3YFR024C-A HXT16P47185 567 aa9.07□□□□□ -0.96
LSB3YFR024C-A HXT15P54854 567 aa9.07□□□□□ -0.96
LSB3YFR024C-A YMR209CQ03648 457 aa9.07□□□□□ -0.96
LSB3YFR024C-A SPO20Q04359 397 aa9.07□□□□□ -0.96
LSB3YFR024C-A PFA4Q12006 378 aa9.07□□□□□ -0.96
LSB3YFR024C-A YLR053CQ12026 108 aa9.07□□□□□ -0.96
LSB3YFR024C-A UBX3Q12229 455 aa9.07□□□□□ -0.96
LSB3YFR024C-A HSH49Q99181 213 aaPredicted RBP9.07□□□□□ -0.96
LSB3YFR024C-A FUM1P08417 488 aaKnown RBP9.06□□□□□ -0.96
LSB3YFR024C-A RSR1P13856 272 aa9.06□□□□□ -0.96
LSB3YFR024C-A CLB1P24868 471 aa9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms