RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W LCB2P40970 561 aa5.21□□□□□ -1.58
UBC6YER100W SMC3P47037 1230 aa5.21□□□□□ -1.58
UBC6YER100W IRC8P47046 822 aa5.21□□□□□ -1.58
UBC6YER100W RPS7BP48164 190 aaKnown RBP5.21□□□□□ -1.58
UBC6YER100W VPS73P53142 486 aaKnown RBP5.21□□□□□ -1.58
UBC6YER100W YGR127WP53275 312 aa5.21□□□□□ -1.58
UBC6YER100W CPR8P53728 308 aa5.21□□□□□ -1.58
UBC6YER100W RAD33Q04231 177 aa5.21□□□□□ -1.58
UBC6YER100W PLM2Q04383 521 aa5.21□□□□□ -1.58
UBC6YER100W YOL073CQ08232 322 aa5.21□□□□□ -1.58
UBC6YER100W RLM1Q12224 676 aa5.21□□□□□ -1.58
UBC6YER100W CYB2P00175 591 aa5.2□□□□□ -1.58
UBC6YER100W EST1P17214 699 aaPredicted RBP5.2□□□□□ -1.58
UBC6YER100W APN1P22936 367 aa5.2□□□□□ -1.58
UBC6YER100W RRP43P25359 394 aaPredicted RBP5.2□□□□□ -1.58
UBC6YER100W RRP7P25368 297 aaPredicted RBP5.2□□□□□ -1.58
UBC6YER100W PMI40P29952 429 aaKnown RBP5.2□□□□□ -1.58
UBC6YER100W MNN2P38069 597 aa5.2□□□□□ -1.58
UBC6YER100W SUL1P38359 859 aa5.2□□□□□ -1.58
UBC6YER100W AFG3P39925 761 aa5.2□□□□□ -1.58
UBC6YER100W OPT1P40897 799 aa5.2□□□□□ -1.58
UBC6YER100W CAK1P43568 368 aaPredicted RBP5.2□□□□□ -1.58
UBC6YER100W IMD4P50094 524 aaKnown RBP5.2□□□□□ -1.58
UBC6YER100W YML053CQ04978 212 aa5.2□□□□□ -1.58
UBC6YER100W HRD3Q05787 833 aa5.2□□□□□ -1.58
UBC6YER100W FMP45Q07651 309 aa5.2□□□□□ -1.58
UBC6YER100W LEU9Q12166 604 aaKnown RBP5.2□□□□□ -1.58
UBC6YER100W AFI1Q99222 893 aa5.2□□□□□ -1.58
UBC6YER100W LTV1P34078 463 aa5.19□□□□□ -1.58
UBC6YER100W PIM1P36775 1133 aa5.19□□□□□ -1.58
UBC6YER100W YMC2P38087 329 aa5.19□□□□□ -1.58
UBC6YER100W SAP1P39955 897 aaKnown RBP5.19□□□□□ -1.58
UBC6YER100W MIT1P40002 666 aa5.19□□□□□ -1.58
UBC6YER100W YGL117WP53133 265 aa5.19□□□□□ -1.58
UBC6YER100W EOS1P53938 366 aa5.19□□□□□ -1.58
UBC6YER100W WAR1Q03631 944 aa5.19□□□□□ -1.58
UBC6YER100W DON1Q05610 365 aa5.19□□□□□ -1.58
UBC6YER100W PCL8Q08966 492 aa5.19□□□□□ -1.58
UBC6YER100W SPE3Q12074 293 aaKnown RBP5.19□□□□□ -1.58
UBC6YER100W TAF3Q12297 353 aa5.19□□□□□ -1.58
UBC6YER100W YMR084WA2P2R3 262 aa5.18□□□□□ -1.58
UBC6YER100W BRF1P29056 596 aa5.18□□□□□ -1.58
UBC6YER100W MRPL9P31334 269 aa5.18□□□□□ -1.58
UBC6YER100W TFB1P32776 642 aa5.18□□□□□ -1.58
UBC6YER100W ELM1P32801 640 aa5.18□□□□□ -1.58
UBC6YER100W NIP100P33420 868 aa5.18□□□□□ -1.58
UBC6YER100W UIP5P36137 443 aa5.18□□□□□ -1.58
UBC6YER100W CBR1P38626 284 aaKnown RBP5.18□□□□□ -1.58
UBC6YER100W PCL5P38794 229 aa5.18□□□□□ -1.58
UBC6YER100W ELO1P39540 310 aa5.18□□□□□ -1.58
UBC6YER100W PES4P39684 611 aa5.18□□□□□ -1.58
UBC6YER100W MAF1P41910 395 aa5.18□□□□□ -1.58
UBC6YER100W TDA10P42938 290 aa5.18□□□□□ -1.58
UBC6YER100W STB2P46679 850 aa5.18□□□□□ -1.58
UBC6YER100W OCA1P50946 238 aaPredicted RBP5.18□□□□□ -1.58
UBC6YER100W AAT1Q01802 451 aa5.18□□□□□ -1.58
UBC6YER100W RPC11Q04307 110 aaPredicted RBP5.18□□□□□ -1.58
UBC6YER100W GYL1Q04322 720 aa5.18□□□□□ -1.58
UBC6YER100W RBS1Q05672 457 aaKnown RBP5.18□□□□□ -1.58
UBC6YER100W RTT109Q07794 436 aa5.18□□□□□ -1.58
UBC6YER100W CUE5Q08412 411 aaKnown RBP5.18□□□□□ -1.58
UBC6YER100W LEA1Q08963 238 aaPredicted RBP5.18□□□□□ -1.58
UBC6YER100W GPM3Q12326 303 aa5.18□□□□□ -1.58
UBC6YER100W ART10P18634 518 aaKnown RBP5.17□□□□□ -1.58
UBC6YER100W SPE2P21182 396 aa5.17□□□□□ -1.58
UBC6YER100W PTC6P25646 442 aa5.17□□□□□ -1.58
UBC6YER100W ERV1P27882 189 aa5.17□□□□□ -1.58
UBC6YER100W CTS1P29029 562 aa5.17□□□□□ -1.58
UBC6YER100W HXT3P32466 567 aaKnown RBP5.17□□□□□ -1.58
UBC6YER100W HCS1P34243 683 aa5.17□□□□□ -1.58
UBC6YER100W NUP133P36161 1157 aa5.17□□□□□ -1.58
UBC6YER100W HOS2P53096 452 aaPredicted RBP5.17□□□□□ -1.58
UBC6YER100W YNL058CP53947 316 aa5.17□□□□□ -1.58
UBC6YER100W PRP42Q03776 544 aaKnown RBP5.17□□□□□ -1.58
UBC6YER100W RSF1Q05043 376 aa5.17□□□□□ -1.58
UBC6YER100W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
UBC6YER100W MDM20Q12387 796 aaKnown RBP5.17□□□□□ -1.58
UBC6YER100W AHA1Q12449 350 aaKnown RBP5.17□□□□□ -1.58
UBC6YER100W YDL007C-AQ2V2Q0 85 aa5.17□□□□□ -1.58
UBC6YER100W RPL7AP05737 244 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W TPK2P06245 380 aa5.16□□□□□ -1.58
UBC6YER100W MRP13P12686 339 aa5.16□□□□□ -1.58
UBC6YER100W PMA2P19657 947 aa5.16□□□□□ -1.58
UBC6YER100W KGD1P20967 1014 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W IDH2P28241 369 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W YJU2P28320 278 aaPredicted RBP5.16□□□□□ -1.58
UBC6YER100W RML2P32611 393 aa5.16□□□□□ -1.58
UBC6YER100W YME2P32843 850 aa5.16□□□□□ -1.58
UBC6YER100W UGP1P32861 499 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W HEL1P36113 551 aa5.16□□□□□ -1.58
UBC6YER100W ADE17P38009 592 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W YJL107CP42947 387 aa5.16□□□□□ -1.58
UBC6YER100W YFL015CP43578 164 aa5.16□□□□□ -1.58
UBC6YER100W FYV8P46949 817 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W MPP10P47083 593 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W MNP1P53163 194 aaPredicted RBP5.16□□□□□ -1.58
UBC6YER100W CUL3P53202 744 aa5.16□□□□□ -1.58
UBC6YER100W YGR111WP53265 400 aa5.16□□□□□ -1.58
UBC6YER100W YPL107WQ02873 248 aa5.16□□□□□ -1.58
UBC6YER100W TAP42Q04372 366 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms