RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W CLN3P13365 580 aa5.27□□□□□ -1.57
UBP9YER098W RSR1P13856 272 aa5.27□□□□□ -1.57
UBP9YER098W MSB1P21339 1137 aaKnown RBP5.27□□□□□ -1.57
UBP9YER098W MRP20P32387 263 aa5.27□□□□□ -1.57
UBP9YER098W UBP13P38187 747 aa5.27□□□□□ -1.57
UBP9YER098W LSM5P40089 93 aaKnown RBP5.27□□□□□ -1.57
UBP9YER098W NMD5P46970 1048 aa5.27□□□□□ -1.57
UBP9YER098W YGR035CP53222 116 aa5.27□□□□□ -1.57
UBP9YER098W CIK1Q01649 594 aa5.27□□□□□ -1.57
UBP9YER098W SLU7Q02775 382 aaKnown RBP5.27□□□□□ -1.57
UBP9YER098W MMT1Q03218 510 aa5.27□□□□□ -1.57
UBP9YER098W FIN1Q03898 291 aa5.27□□□□□ -1.57
UBP9YER098W DON1Q05610 365 aa5.27□□□□□ -1.57
UBP9YER098W SIL1Q08199 421 aa5.27□□□□□ -1.57
UBP9YER098W YPL216WQ08964 1102 aa5.27□□□□□ -1.57
UBP9YER098W VIK1Q12045 647 aa5.27□□□□□ -1.57
UBP9YER098W HUA2Q12134 243 aa5.27□□□□□ -1.57
UBP9YER098W SUL2Q12325 893 aa5.27□□□□□ -1.57
UBP9YER098W POM34Q12445 299 aa5.27□□□□□ -1.57
UBP9YER098W HRP1Q99383 534 aaKnown RBP5.27□□□□□ -1.57
UBP9YER098W YPR089WO13585 888 aa5.26□□□□□ -1.57
UBP9YER098W TUB2P02557 457 aaKnown RBP5.26□□□□□ -1.57
UBP9YER098W GAR1P28007 205 aaKnown RBP5.26□□□□□ -1.57
UBP9YER098W EFT1P32324 842 aaKnown RBP5.26□□□□□ -1.57
UBP9YER098W ERG3P32353 365 aa5.26□□□□□ -1.57
UBP9YER098W UTP11P34247 250 aaPredicted RBP5.26□□□□□ -1.57
UBP9YER098W AST1P35183 429 aa5.26□□□□□ -1.57
UBP9YER098W PCF11P39081 626 aaPredicted RBP5.26□□□□□ -1.57
UBP9YER098W NPT1P39683 429 aaKnown RBP5.26□□□□□ -1.57
UBP9YER098W GET2P40056 285 aa5.26□□□□□ -1.57
UBP9YER098W YMR147WP40218 223 aaKnown RBP5.26□□□□□ -1.57
UBP9YER098W ALG5P40350 334 aa5.26□□□□□ -1.57
UBP9YER098W ARF3P40994 183 aaRIP-Chip data5.26□□□□□ -1.57not detected
UBP9YER098W MET12P46151 657 aa5.26□□□□□ -1.57
UBP9YER098W RFX1P48743 811 aa5.26□□□□□ -1.57
UBP9YER098W YML6P51998 286 aa5.26□□□□□ -1.57
UBP9YER098W LSG1P53145 640 aaKnown RBP5.26□□□□□ -1.57
UBP9YER098W YGR266WP53326 701 aa5.26□□□□□ -1.57
UBP9YER098W ESBP6P53918 673 aa5.26□□□□□ -1.57
UBP9YER098W ARP9Q05123 467 aa5.26□□□□□ -1.57
UBP9YER098W YDR341CQ05506 607 aaKnown RBP5.26□□□□□ -1.57
UBP9YER098W ATG17Q06410 417 aa5.26□□□□□ -1.57
UBP9YER098W ENT4Q07872 247 aa5.26□□□□□ -1.57
UBP9YER098W TRM11Q12463 433 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-LR1P0C2J4 438 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-FP0CX61 438 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-GR2P0CX62 438 aa5.26□□□□□ -1.57
UBP9YER098W YAK1P14680 807 aa5.26□□□□□ -1.57
UBP9YER098W CNA1P23287 553 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-CP25383 438 aa5.26□□□□□ -1.57
UBP9YER098W YBL055CP34220 418 aaPredicted RBP5.26□□□□□ -1.57
UBP9YER098W TOS1P38288 455 aa5.26□□□□□ -1.57
UBP9YER098W PSD1P39006 500 aa5.26□□□□□ -1.57
UBP9YER098W ZAP1P47043 880 aa5.26□□□□□ -1.57
UBP9YER098W RPC17P47076 161 aa5.26□□□□□ -1.57
UBP9YER098W NCS6P53088 359 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-DR2Q03483 438 aa5.26□□□□□ -1.57
UBP9YER098W PLB2Q03674 706 aa5.26□□□□□ -1.57
UBP9YER098W GTB1Q04924 702 aa5.26□□□□□ -1.57
UBP9YER098W AIM41Q12032 185 aa5.26□□□□□ -1.57
UBP9YER098W NBP2Q12163 236 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-BQ12260 438 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-OR2Q12293 438 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-DR1Q12392 438 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-OR1Q12439 438 aa5.26□□□□□ -1.57
UBP9YER098W TY2A-DR3Q99303 438 aa5.26□□□□□ -1.57
UBP9YER098W HIS3P06633 220 aa5.25□□□□□ -1.57
UBP9YER098W CDC24P11433 854 aaPredicted RBP5.25□□□□□ -1.57
UBP9YER098W CLB2P24869 491 aa5.25□□□□□ -1.57
UBP9YER098W DBF4P32325 704 aa5.25□□□□□ -1.57
UBP9YER098W HXT1P32465 570 aa5.25□□□□□ -1.57
UBP9YER098W IST3P40565 148 aaPredicted RBP5.25□□□□□ -1.57
UBP9YER098W ECL1P48235 211 aa5.25□□□□□ -1.57
UBP9YER098W TEX1P53851 422 aaKnown RBP5.25□□□□□ -1.57
UBP9YER098W REG1Q00816 1014 aa5.25□□□□□ -1.57
UBP9YER098W ROT1Q03691 256 aa5.25□□□□□ -1.57
UBP9YER098W ACL4Q03771 387 aa5.25□□□□□ -1.57
UBP9YER098W ECI1Q05871 280 aa5.25□□□□□ -1.57
UBP9YER098W GET3Q12154 354 aaKnown RBP5.25□□□□□ -1.57
UBP9YER098W YDR215CQ12240 137 aa5.25□□□□□ -1.57
UBP9YER098W BBP1Q12365 385 aa5.25□□□□□ -1.57
UBP9YER098W YBR126W-AQ8TGU7 68 aa5.25□□□□□ -1.57
UBP9YER098W SEY1Q99287 776 aa5.25□□□□□ -1.57
UBP9YER098W YIL177CP40434 1758 aa5.25□□□□□ -1.57
UBP9YER098W YJL225CP40889 1758 aa5.25□□□□□ -1.57
UBP9YER098W POM152P39685 1337 aa5.25□□□□□ -1.57
UBP9YER098W SEC53P07283 254 aaKnown RBP5.25□□□□□ -1.57
UBP9YER098W POL30P15873 258 aaKnown RBP5.25□□□□□ -1.57
UBP9YER098W PDX1P16451 410 aa5.25□□□□□ -1.57
UBP9YER098W SEC15P22224 910 aa5.25□□□□□ -1.57
UBP9YER098W UBA1P22515 1024 aaKnown RBP5.25□□□□□ -1.57
UBP9YER098W MRPL25P23369 157 aa5.25□□□□□ -1.57
UBP9YER098W BUD23P25627 275 aaPredicted RBP5.25□□□□□ -1.57
UBP9YER098W OCT1P35999 772 aa5.25□□□□□ -1.57
UBP9YER098W YBP1P38315 674 aa5.25□□□□□ -1.57
UBP9YER098W SWC5P38326 303 aa5.25□□□□□ -1.57
UBP9YER098W RPP1P38786 293 aa5.25□□□□□ -1.57
UBP9YER098W LRP1P38801 184 aaKnown RBP5.25□□□□□ -1.57
UBP9YER098W ARC1P46672 376 aaKnown RBP5.25□□□□□ -1.57
UBP9YER098W MRX6P48564 524 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms