RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W TY1B-BLQ12490 1755 aa2.6□□□□□ -1.99
SNX41YDR425W SPO14P36126 1683 aa2.6□□□□□ -1.99
SNX41YDR425W NUP192P47054 1683 aa2.6□□□□□ -1.99
SNX41YDR425W YFL068WP0CX99 160 aa2.6□□□□□ -1.99
SNX41YDR425W YLL066W-AP0CY00 160 aa2.6□□□□□ -1.99
SNX41YDR425W YLL067W-AP0CY01 160 aa2.6□□□□□ -1.99
SNX41YDR425W CDC15P27636 974 aa2.6□□□□□ -1.99
SNX41YDR425W YME2P32843 850 aa2.6□□□□□ -1.99
SNX41YDR425W MUD2P36084 527 aaKnown RBP2.6□□□□□ -1.99
SNX41YDR425W EXO84P38261 753 aa2.6□□□□□ -1.99
SNX41YDR425W SPT8P38915 602 aa2.6□□□□□ -1.99
SNX41YDR425W PUG1P40100 303 aa2.6□□□□□ -1.99
SNX41YDR425W MEP2P41948 499 aa2.6□□□□□ -1.99
SNX41YDR425W APT1P49435 187 aaKnown RBP2.6□□□□□ -1.99
SNX41YDR425W BOP3P53958 396 aa2.6□□□□□ -1.99
SNX41YDR425W SPO19Q03029 223 aa2.6□□□□□ -1.99
SNX41YDR425W YDR109CQ04585 715 aa2.6□□□□□ -1.99
SNX41YDR425W SWF1Q04629 336 aa2.6□□□□□ -1.99
SNX41YDR425W ERV41Q04651 352 aa2.6□□□□□ -1.99
SNX41YDR425W MLH2Q07980 695 aa2.6□□□□□ -1.99
SNX41YDR425W RPO26P20435 155 aa2.59□□□□□ -1.99
SNX41YDR425W CDC60P26637 1090 aaKnown RBP2.59□□□□□ -1.99
SNX41YDR425W RAD24P32641 659 aa2.59□□□□□ -1.99
SNX41YDR425W RRP1P35178 278 aaPredicted RBP2.59□□□□□ -1.99
SNX41YDR425W AAP1P37898 856 aaKnown RBP2.59□□□□□ -1.99
SNX41YDR425W MAL33P38157 468 aa2.59□□□□□ -1.99
SNX41YDR425W CCT4P39078 528 aaKnown RBP2.59□□□□□ -1.99
SNX41YDR425W PCL6P40038 420 aa2.59□□□□□ -1.99
SNX41YDR425W RPT2P40327 437 aaKnown RBP2.59□□□□□ -1.99
SNX41YDR425W TFG2P41896 400 aaPredicted RBP2.59□□□□□ -1.99
SNX41YDR425W SKP2P42843 763 aa2.59□□□□□ -1.99
SNX41YDR425W CAF130P53280 1122 aaPredicted RBP2.59□□□□□ -1.99
SNX41YDR425W ADE16P54113 591 aaKnown RBP2.59□□□□□ -1.99
SNX41YDR425W TRS130Q03660 1102 aa2.59□□□□□ -1.99
SNX41YDR425W ECM22Q05958 814 aaPredicted RBP2.59□□□□□ -1.99
SNX41YDR425W GSH2Q08220 491 aa2.59□□□□□ -1.99
SNX41YDR425W BUD7Q08754 746 aa2.59□□□□□ -1.99
SNX41YDR425W RIM20Q12033 661 aa2.59□□□□□ -1.99
SNX41YDR425W ATG9Q12142 997 aa2.59□□□□□ -1.99
SNX41YDR425W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
SNX41YDR425W SWI1P09547 1314 aa2.58□□□□□ -2
SNX41YDR425W MRP2P10663 115 aaPredicted RBP2.58□□□□□ -2
SNX41YDR425W PRP16P15938 1071 aaPredicted RBP2.58□□□□□ -2
SNX41YDR425W RFA2P26754 273 aaKnown RBP2.58□□□□□ -2
SNX41YDR425W DPB3P27344 201 aa2.58□□□□□ -2
SNX41YDR425W GCD7P32502 381 aaPredicted RBP2.58□□□□□ -2
SNX41YDR425W PSY4P38193 441 aa2.58□□□□□ -2
SNX41YDR425W CAJ1P39101 391 aa2.58□□□□□ -2
SNX41YDR425W ASG1P40467 964 aa2.58□□□□□ -2
SNX41YDR425W YIR016WP40572 265 aa2.58□□□□□ -2
SNX41YDR425W UBP8P50102 471 aa2.58□□□□□ -2
SNX41YDR425W VPS75P53853 264 aa2.58□□□□□ -2
SNX41YDR425W YNL144CP53907 740 aa2.58□□□□□ -2
SNX41YDR425W YLR455WQ06188 304 aa2.58□□□□□ -2
SNX41YDR425W TMA16Q08687 178 aa2.58□□□□□ -2
SNX41YDR425W DSE3Q08729 430 aa2.58□□□□□ -2
SNX41YDR425W RUD3Q12234 484 aaKnown RBP2.58□□□□□ -2
SNX41YDR425W BCK1Q01389 1478 aa2.58□□□□□ -2
SNX41YDR425W ARD1P07347 238 aaPredicted RBP2.58□□□□□ -2
SNX41YDR425W KRS1P15180 591 aaKnown RBP2.58□□□□□ -2
SNX41YDR425W NCP1P16603 691 aaKnown RBP2.58□□□□□ -2
SNX41YDR425W MRPS28P21771 286 aa2.58□□□□□ -2
SNX41YDR425W CLB4P24871 460 aa2.58□□□□□ -2
SNX41YDR425W YCR043CP25361 127 aa2.58□□□□□ -2
SNX41YDR425W ARC40P38328 384 aaKnown RBP2.58□□□□□ -2
SNX41YDR425W ACA1P39970 489 aa2.58□□□□□ -2
SNX41YDR425W SEC9P40357 651 aa2.58□□□□□ -2
SNX41YDR425W ERR3P42222 437 aa2.58□□□□□ -2
SNX41YDR425W RPN11P43588 306 aaKnown RBP2.58□□□□□ -2
SNX41YDR425W ZAP1P47043 880 aa2.58□□□□□ -2
SNX41YDR425W YJR079WP47126 109 aa2.58□□□□□ -2
SNX41YDR425W MAL13P53338 473 aa2.58□□□□□ -2
SNX41YDR425W DCP2P53550 970 aaKnown RBP2.58□□□□□ -2
SNX41YDR425W CSL4P53859 292 aaPredicted RBP2.58□□□□□ -2
SNX41YDR425W UBX2Q04228 584 aa2.58□□□□□ -2
SNX41YDR425W CIA1Q05583 330 aa2.58□□□□□ -2
SNX41YDR425W SNA4Q07549 140 aa2.58□□□□□ -2
SNX41YDR425W CMS1Q07897 291 aaKnown RBP2.58□□□□□ -2
SNX41YDR425W SWT1Q12104 458 aa2.58□□□□□ -2
SNX41YDR425W YPL150WQ12152 901 aa2.58□□□□□ -2
SNX41YDR425W SMC6Q12749 1114 aa2.58□□□□□ -2
SNX41YDR425W RPO41P13433 1351 aaKnown RBP2.57□□□□□ -2
SNX41YDR425W RAD1P06777 1100 aa2.57□□□□□ -2
SNX41YDR425W SPO16P17122 198 aa2.57□□□□□ -2
SNX41YDR425W MSM1P22438 575 aa2.57□□□□□ -2
SNX41YDR425W YCL049CP25577 312 aa2.57□□□□□ -2
SNX41YDR425W PDB1P32473 366 aaKnown RBP2.57□□□□□ -2
SNX41YDR425W SCO2P38072 301 aa2.57□□□□□ -2
SNX41YDR425W LEU5P38702 357 aa2.57□□□□□ -2
SNX41YDR425W TES1P41903 349 aaKnown RBP2.57□□□□□ -2
SNX41YDR425W MIC19P43594 170 aa2.57□□□□□ -2
SNX41YDR425W ARO80Q04052 950 aa2.57□□□□□ -2
SNX41YDR425W STE23Q06010 1027 aa2.57□□□□□ -2
SNX41YDR425W TFC6Q06339 672 aa2.57□□□□□ -2
SNX41YDR425W RLP24Q07915 199 aaKnown RBP2.57□□□□□ -2
SNX41YDR425W PGA3Q12746 312 aaKnown RBP2.57□□□□□ -2
SNX41YDR425W MTF2P10849 440 aa2.56□□□□□ -2
SNX41YDR425W PMR1P13586 950 aa2.56□□□□□ -2
SNX41YDR425W KAR3P17119 729 aa2.56□□□□□ -2
SNX41YDR425W TPM1P17536 199 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms