RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	SPT15	P13393	240 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	SDH2	P21801	266 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	BAS1	P22035	811 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	MVD1	P32377	396 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	SSO1	P32867	290 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	MED8	P38304	223 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	QRI7	P43122	407 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	ALY2	P47029	1046 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	GCV1	P48015	400 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	PSP1	P50896	841 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	YGR250C	P53316	781 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	SPG3	Q04398	127 aa	Predicted RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	YEH1	Q07804	573 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	RPN5	Q12250	445 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	SUT2	Q12286	268 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	PPH22	P23595	377 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	SPS22	P25380	463 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	APM3	P38153	483 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	MRM2	P53123	320 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	OPT2	Q06593	877 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	REX3	Q12090	404 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	HMG2	P12684	1045 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	CYS3	P31373	394 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	LAM1	P38851	1228 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	YHR202W	P38887	602 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	FAA3	P39002	694 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	YJL068C	P40363	299 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	KEL2	P50090	882 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	KTR6	P54070	446 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	SIZ1	Q04195	904 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	GRX8	Q05926	109 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	DIS3	Q08162	1001 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	CUE5	Q08412	411 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	APE1	P14904	514 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	HNM1	P19807	563 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	EMC1	P25574	760 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	YCL049C	P25577	312 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	HRR25	P29295	494 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	LIP5	P32875	414 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	GLG1	P36143	616 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	BET3	P36149	193 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	YHL026C	P38740	315 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	AIM18	P38884	321 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	SCS2	P40075	244 aa	Known RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	KXD1	P53158	218 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	YNL143C	P53908	130 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	CDC14	Q00684	551 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	NOT5	Q12514	560 aa	Predicted RBP	4.62	□□□□□ -1.67
PDR15	YDR406W	RGS2	Q99188	309 aa		4.62	□□□□□ -1.67
PDR15	YDR406W	TEF1	P02994	458 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	GPH1	P06738	902 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	KSS1	P14681	368 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	PHA2	P32452	334 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	HXT3	P32466	567 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	PDB1	P32473	366 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	MKK2	P32491	506 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	BAP2	P38084	609 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	CDC1	P40986	491 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	OYE3	P41816	400 aa	Predicted RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	NUT1	P53114	1132 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	SLD3	P53135	668 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	UBP2	Q01476	1272 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	SWA2	Q06677	668 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	RCL1	Q08096	367 aa	Predicted RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	GPM3	Q12326	303 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	CKA1	P15790	372 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	MET16	P18408	261 aa	Predicted RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	RIB7	P33312	244 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	GIP1	P38229	639 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	YEL028W	P39989	153 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	RPS10B	P46784	105 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	VPS62	P53285	467 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	RSA3	Q05942	220 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	MRI1	Q06489	411 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	YLL007C	Q07799	665 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
PDR15	YDR406W	GYP1	Q08484	637 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	RPS10A	Q08745	105 aa	Predicted RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
PDR15	YDR406W	AVL9	Q12500	764 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	EST1	P17214	699 aa	Predicted RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	AMS1	P22855	1083 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	ADY2	P25613	283 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	YIH1	P25637	258 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	PCL2	P25693	308 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	YKL069W	P36088	180 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	IRS4	P36115	615 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	ABZ1	P37254	787 aa	Predicted RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	PIC2	P40035	300 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	ERR3	P42222	437 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	RRT5	P43607	289 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	NOP9	P47077	666 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	SHE4	P51534	789 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	PUS2	P53167	370 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	RBG2	P53295	368 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	ATP25	Q03153	612 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	SEG1	Q04279	960 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	HRT3	Q12347	344 aa		4.61	□□□□□ -1.67
PDR15	YDR406W	MDM20	Q12387	796 aa	Known RBP	4.61	□□□□□ -1.67
PDR15	YDR406W	CLB4	P24871	460 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms