RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W GCD2P12754 651 aaPredicted RBP2.48□□□□□ -2.01
SWR1YDR334W DBP3P20447 523 aaKnown RBP2.48□□□□□ -2.01
SWR1YDR334W MRPL25P23369 157 aa2.48□□□□□ -2.01
SWR1YDR334W RNA14P25298 677 aaKnown RBP2.48□□□□□ -2.01
SWR1YDR334W TPS2P31688 896 aaKnown RBP2.48□□□□□ -2.01
SWR1YDR334W ATP3P38077 311 aaKnown RBP2.48□□□□□ -2.01
SWR1YDR334W PCF11P39081 626 aaPredicted RBP2.48□□□□□ -2.01
SWR1YDR334W PHO90P39535 881 aa2.48□□□□□ -2.01
SWR1YDR334W ZRG8P40021 1076 aa2.48□□□□□ -2.01
SWR1YDR334W DOT5P40553 215 aa2.48□□□□□ -2.01
SWR1YDR334W SCD6P45978 349 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01 RIP-Chip
SWR1YDR334W SKI6P46948 246 aaPredicted RBP2.48□□□□□ -2.01
SWR1YDR334W UBC12P52491 188 aa2.48□□□□□ -2.01
SWR1YDR334W JAC1P53193 184 aa2.48□□□□□ -2.01
SWR1YDR334W YGR021WP53212 290 aa2.48□□□□□ -2.01
SWR1YDR334W YGR127WP53275 312 aa2.48□□□□□ -2.01
SWR1YDR334W NOP13P53883 403 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SWR1YDR334W CEG1Q01159 459 aaPredicted RBP2.48□□□□□ -2.01
SWR1YDR334W COA2Q3E823 68 aa2.48□□□□□ -2.01
SWR1YDR334W DDP1Q99321 188 aaKnown RBP2.48□□□□□ -2.01
SWR1YDR334W CYB2P00175 591 aa2.48□□□□□ -2.01
SWR1YDR334W MIS1P09440 975 aaKnown RBP2.48□□□□□ -2.01
SWR1YDR334W POL30P15873 258 aaKnown RBP2.48□□□□□ -2.01
SWR1YDR334W ACB1P31787 87 aa2.48□□□□□ -2.01
SWR1YDR334W ARP2P32381 391 aaKnown RBP2.48□□□□□ -2.01
SWR1YDR334W FLR1P38124 548 aa2.48□□□□□ -2.01
SWR1YDR334W MEP1P40260 492 aa2.48□□□□□ -2.01
SWR1YDR334W SNL1P40548 159 aa2.48□□□□□ -2.01
SWR1YDR334W ALY2P47029 1046 aa2.48□□□□□ -2.01
SWR1YDR334W IMA1P53051 589 aa2.48□□□□□ -2.01
SWR1YDR334W GTR2P53290 341 aa2.48□□□□□ -2.01
SWR1YDR334W RPL6AQ02326 176 aaKnown RBP2.48□□□□□ -2.01
SWR1YDR334W MUK1Q02866 612 aa2.48□□□□□ -2.01
SWR1YDR334W FDC1Q03034 503 aa2.48□□□□□ -2.01
SWR1YDR334W PLP1Q04004 230 aa2.48□□□□□ -2.01
SWR1YDR334W RCO1Q04779 684 aa2.48□□□□□ -2.01
SWR1YDR334W RTT109Q07794 436 aa2.48□□□□□ -2.01
SWR1YDR334W HAL9Q12180 1030 aa2.48□□□□□ -2.01
SWR1YDR334W HER1Q12276 1246 aa2.48□□□□□ -2.01
SWR1YDR334W CYC7P00045 113 aa2.47□□□□□ -2.01
SWR1YDR334W TRP4P07285 380 aaPredicted RBP2.47□□□□□ -2.01
SWR1YDR334W SUI3P09064 285 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W WHI2P12611 486 aa2.47□□□□□ -2.01
SWR1YDR334W PMS1P14242 873 aa2.47□□□□□ -2.01
SWR1YDR334W CDC20P26309 610 aa2.47□□□□□ -2.01
SWR1YDR334W APL1P27351 700 aa2.47□□□□□ -2.01
SWR1YDR334W NRP1P32770 719 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SWR1YDR334W MRS6P32864 603 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W CLB6P32943 380 aa2.47□□□□□ -2.01
SWR1YDR334W LNP1P38878 278 aa2.47□□□□□ -2.01
SWR1YDR334W AKR1P39010 764 aa2.47□□□□□ -2.01
SWR1YDR334W MEF2P39677 819 aa2.47□□□□□ -2.01
SWR1YDR334W TPA1P40032 644 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W SYG1P40528 902 aa2.47□□□□□ -2.01
SWR1YDR334W TIR3P40552 269 aa2.47□□□□□ -2.01
SWR1YDR334W IAH1P41734 238 aa2.47□□□□□ -2.01
SWR1YDR334W NPA3P47122 385 aa2.47□□□□□ -2.01
SWR1YDR334W YMR315WQ04869 349 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W RGC1Q06108 1083 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W IWR1Q07532 353 aaPredicted RBP2.47□□□□□ -2.01
SWR1YDR334W GPB1Q08886 897 aa2.47□□□□□ -2.01
SWR1YDR334W SLM3Q12093 417 aa2.47□□□□□ -2.01
SWR1YDR334W YDL177CQ12257 170 aa2.47□□□□□ -2.01
SWR1YDR334W VPS5Q92331 675 aa2.47□□□□□ -2.01
SWR1YDR334W DFG16Q99234 619 aa2.47□□□□□ -2.01
SWR1YDR334W YLR149CQ99296 730 aa2.47□□□□□ -2.01
SWR1YDR334W ENA1P13587 1091 aa2.47□□□□□ -2.01
SWR1YDR334W GLK1P17709 500 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W PET18P25362 215 aa2.47□□□□□ -2.01
SWR1YDR334W CWH43P25618 953 aa2.47□□□□□ -2.01
SWR1YDR334W ERG9P29704 444 aa2.47□□□□□ -2.01
SWR1YDR334W DHR2P36009 735 aaPredicted RBP2.47□□□□□ -2.01
SWR1YDR334W YPT52P36018 234 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W POA1P38218 177 aa2.47□□□□□ -2.01
SWR1YDR334W GTS1P40956 396 aa2.47□□□□□ -2.01
SWR1YDR334W TRS85P46944 698 aa2.47□□□□□ -2.01
SWR1YDR334W MDE1P47095 244 aa2.47□□□□□ -2.01
SWR1YDR334W SLI1P53304 468 aa2.47□□□□□ -2.01
SWR1YDR334W FOL1P53848 824 aa2.47□□□□□ -2.01
SWR1YDR334W ENA2Q01896 1091 aa2.47□□□□□ -2.01
SWR1YDR334W KAP95Q06142 861 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W CRD1Q07560 283 aa2.47□□□□□ -2.01
SWR1YDR334W YDL144CQ07589 356 aa2.47□□□□□ -2.01
SWR1YDR334W ACK1Q07622 623 aaPredicted RBP2.47□□□□□ -2.01
SWR1YDR334W FDH1Q08911 376 aa2.47□□□□□ -2.01
SWR1YDR334W ENA5Q12691 1091 aa2.47□□□□□ -2.01
SWR1YDR334W VAR1P02381 398 aa2.47□□□□□ -2.01
SWR1YDR334W GAL10P04397 699 aa2.47□□□□□ -2.01
SWR1YDR334W VMA2P16140 517 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W MRPL8P22353 238 aa2.47□□□□□ -2.01
SWR1YDR334W DPB2P24482 689 aaPredicted RBP2.47□□□□□ -2.01
SWR1YDR334W SPS22P25380 463 aa2.47□□□□□ -2.01
SWR1YDR334W PHO91P27514 894 aa2.47□□□□□ -2.01
SWR1YDR334W PTP2P29461 750 aa2.47□□□□□ -2.01
SWR1YDR334W HIR1P32479 840 aa2.47□□□□□ -2.01
SWR1YDR334W BMH2P34730 273 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W SHM2P37291 469 aaKnown RBP2.47□□□□□ -2.01
SWR1YDR334W HSM3P38348 480 aa2.47□□□□□ -2.01
SWR1YDR334W ALG5P40350 334 aa2.47□□□□□ -2.01
SWR1YDR334W YJL070CP40361 888 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms