RNA–Protein interactions for RNA: YDR330W

UBX5, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeast

Gene UBX5, Length 1,503 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBX5	YDR330W	BUD16	P39988	312 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	FMP10	P40098	244 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	TCB2	P48231	1178 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	YGL138C	P53122	345 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	SMX3	P54999	86 aa	Predicted RBP	4.05	□□□□□ -1.76
UBX5	YDR330W	MUB1	Q03162	620 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	RAD30	Q04049	632 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	TAF11	Q04226	346 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	MMR1	Q06324	491 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	VIP1	Q06685	1146 aa	Known RBP	4.05	□□□□□ -1.76
UBX5	YDR330W	ENT4	Q07872	247 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	CRT10	Q08226	957 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	KEL3	Q08979	651 aa	Predicted RBP	4.05	□□□□□ -1.76
UBX5	YDR330W	LYS21	Q12122	440 aa	Known RBP	4.05	□□□□□ -1.76
UBX5	YDR330W	NBL1	Q3E7Y6	73 aa		4.05	□□□□□ -1.76
UBX5	YDR330W	AAC1	P04710	309 aa		4.04	□□□□□ -1.76
UBX5	YDR330W	SUI3	P09064	285 aa	Known RBP	4.04	□□□□□ -1.76
UBX5	YDR330W	ALG1	P16661	449 aa		4.04	□□□□□ -1.76
UBX5	YDR330W	KGD2	P19262	463 aa	Predicted RBP	4.04	□□□□□ -1.76
UBX5	YDR330W	SLZ1	P40167	298 aa		4.04	□□□□□ -1.76
UBX5	YDR330W	SPC98	P53540	846 aa		4.04	□□□□□ -1.76
UBX5	YDR330W	ARE2	P53629	642 aa	Known RBP	4.04	□□□□□ -1.76
UBX5	YDR330W	YDR179W-A	Q03983	463 aa		4.04	□□□□□ -1.76
UBX5	YDR330W	ARP9	Q05123	467 aa		4.04	□□□□□ -1.76
UBX5	YDR330W	YDR341C	Q05506	607 aa	Known RBP	4.04	□□□□□ -1.76
UBX5	YDR330W	RCN2	Q12044	265 aa		4.04	□□□□□ -1.76
UBX5	YDR330W	FLO11	P08640	1367 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	STE4	P18851	423 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	SRP54	P20424	541 aa	Known RBP	4.03	□□□□□ -1.76
UBX5	YDR330W	YCK1	P23291	538 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	GLG1	P36143	616 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	RPF2	P36160	344 aa	Known RBP	4.03	□□□□□ -1.76
UBX5	YDR330W	ADE17	P38009	592 aa	Known RBP	4.03	□□□□□ -1.76
UBX5	YDR330W	TOM71	P38825	639 aa	Known RBP	4.03	□□□□□ -1.76
UBX5	YDR330W	FLC2	P39719	783 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	LAS21	P40367	830 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	UBX6	P47049	396 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	EAF6	P47128	113 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	IMO32	P53219	342 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	YGR079W	P53249	370 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	RTC4	P53850	401 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	KIN4	Q01919	800 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	GFD1	Q04839	188 aa	Known RBP	4.03	□□□□□ -1.76
UBX5	YDR330W	HCR1	Q05775	265 aa	Known RBP	4.03	□□□□□ -1.76
UBX5	YDR330W	DSE3	Q08729	430 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	NMD4	Q12129	218 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	RRG1	Q12167	365 aa	Predicted RBP	4.03	□□□□□ -1.76
UBX5	YDR330W	TIP41	Q12199	356 aa		4.03	□□□□□ -1.76
UBX5	YDR330W	PRS5	Q12265	496 aa	Known RBP	4.03	□□□□□ -1.76
UBX5	YDR330W	HIS4	P00815	799 aa	Known RBP	4.02	□□□□□ -1.77
UBX5	YDR330W	RED1	P14291	827 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	ICL1	P28240	557 aa	Predicted RBP	4.02	□□□□□ -1.77
UBX5	YDR330W	SPC110	P32380	944 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	SRB5	P32585	307 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	NPL6	P32832	435 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	PXL1	P36166	706 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	GEX2	P36173	615 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	MTG2	P38860	518 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	RMD8	P43620	662 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	RET3	P53600	189 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	VPS75	P53853	264 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	SKG3	Q06315	1026 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	MRI1	Q06489	411 aa	Known RBP	4.02	□□□□□ -1.77
UBX5	YDR330W	TCO89	Q08921	799 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	AFT2	Q08957	416 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	PCL8	Q08966	492 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	BAG7	Q12128	409 aa		4.02	□□□□□ -1.77
UBX5	YDR330W	YML003W	P0CF16	290 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	CKA1	P15790	372 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	THR4	P16120	514 aa	Known RBP	4.01	□□□□□ -1.77
UBX5	YDR330W	PHO13	P19881	312 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	OCA4	P25366	362 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	TRM2	P33753	639 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	YKL050C	P35736	922 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	YPT10	P38146	199 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	PES4	P39684	611 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	IME4	P41833	600 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	MRX6	P48564	524 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	COG2	P53271	262 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	INN1	P53901	409 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	AAT1	Q01802	451 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	TIM44	Q01852	431 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	YDL242W	Q07746	117 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	SFI1	Q12369	946 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	MDM20	Q12387	796 aa	Known RBP	4.01	□□□□□ -1.77
UBX5	YDR330W	ZPS1	Q12512	249 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	YOR019W	Q99248	730 aa		4.01	□□□□□ -1.77
UBX5	YDR330W	YBR085C-A	O43137	85 aa		4	□□□□□ -1.77
UBX5	YDR330W	ARG3	P05150	338 aa		4	□□□□□ -1.77
UBX5	YDR330W	WHI2	P12611	486 aa		4	□□□□□ -1.77
UBX5	YDR330W	RFA2	P26754	273 aa	Known RBP	4	□□□□□ -1.77
UBX5	YDR330W	PXA2	P34230	853 aa		4	□□□□□ -1.77
UBX5	YDR330W	BLI1	P35727	113 aa		4	□□□□□ -1.77
UBX5	YDR330W	TPA1	P40032	644 aa	Known RBP	4	□□□□□ -1.77
UBX5	YDR330W	COQ6	P53318	479 aa		4	□□□□□ -1.77
UBX5	YDR330W	DCP2	P53550	970 aa	Known RBP	4	□□□□□ -1.77
UBX5	YDR330W	YPL071C	Q02864	156 aa		4	□□□□□ -1.77
UBX5	YDR330W	YMR206W	Q03695	313 aa		4	□□□□□ -1.77
UBX5	YDR330W	UTP21	Q06078	939 aa	Predicted RBP	4	□□□□□ -1.77
UBX5	YDR330W	SMD2	Q06217	110 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms