RNA–Protein interactions for RNA: YDR268W

MSW1, Transcript of Mitochondrial tryptophanyl-tRNA synthetase, yeast

Gene MSW1, Length 1,140 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSW1	YDR268W	VPS25	P47142	202 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	PSP1	P50896	841 aa	Known RBP	4.12	□□□□□ -1.75
MSW1	YDR268W	YAP1802	P53309	568 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	YNR071C	P53757	342 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	TEP1	P53916	434 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	FDC1	Q03034	503 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	HER2	Q03557	464 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	DON1	Q05610	365 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	YCG1	Q06680	1035 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	TSR1	Q07381	788 aa	Known RBP	4.12	□□□□□ -1.75
MSW1	YDR268W	NSE1	Q07913	336 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	MLH3	Q12083	715 aa		4.12	□□□□□ -1.75
MSW1	YDR268W	LAA1	P39526	2014 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	GFA1	P14742	717 aa	Known RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	PET309	P32522	965 aa	Predicted RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	MSS1	P32559	526 aa	Predicted RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	XRS2	P33301	854 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	YKL023W	P36103	277 aa	Known RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	SIF2	P38262	535 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	KAP123	P40069	1113 aa	Known RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	BTT1	P40314	149 aa	Predicted RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	SHQ1	P40486	507 aa	Predicted RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	ZAP1	P47043	880 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	TAH11	P47112	604 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	YDL183C	P48569	320 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	TEL2	P53038	688 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	YGR021W	P53212	290 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	FHN1	P53279	174 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	MUB1	Q03162	620 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	GIR2	Q03768	265 aa	Predicted RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	ABP140	Q08641	628 aa	Known RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	TCO89	Q08921	799 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	GPM2	Q12008	311 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	AIM41	Q12032	185 aa		4.11	□□□□□ -1.75
MSW1	YDR268W	SPE3	Q12074	293 aa	Known RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	DBP10	Q12389	995 aa	Known RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	PDH1	Q12428	516 aa	Known RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	BEM2	P39960	2167 aa	Known RBP	4.11	□□□□□ -1.75
MSW1	YDR268W	CET1	O13297	549 aa	Predicted RBP	4.1	□□□□□ -1.75
MSW1	YDR268W	URA3	P03962	267 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	TPK1	P06244	397 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	CHS1	P08004	1131 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	RRT12	P25381	491 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	PSO2	P30620	661 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	RAD16	P31244	790 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	NTH1	P32356	751 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	FRE1	P32791	686 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	TKL2	P33315	681 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	PTH2	P34222	208 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	YKT6	P36015	200 aa	Known RBP	4.1	□□□□□ -1.75
MSW1	YDR268W	RFT1	P38206	574 aa	Predicted RBP	4.1	□□□□□ -1.75
MSW1	YDR268W	EHT1	P38295	451 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	SWD1	P39706	426 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	TMN3	P40071	706 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	IMA5	P40884	581 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	CHS6	P40955	746 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	MPS3	P47069	682 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	YNR061C	P53747	219 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	IMP4	P53941	290 aa	Known RBP	4.1	□□□□□ -1.75
MSW1	YDR268W	MFB1	Q04922	465 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	TRI1	Q05024	226 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	IWR1	Q07532	353 aa	Predicted RBP	4.1	□□□□□ -1.75
MSW1	YDR268W	RLP24	Q07915	199 aa	Known RBP	4.1	□□□□□ -1.75
MSW1	YDR268W	HOS1	Q12214	470 aa		4.1	□□□□□ -1.75
MSW1	YDR268W	MEX67	Q99257	599 aa	Known RBP	4.1	□□□□□ -1.75
MSW1	YDR268W	MTF1	P14908	341 aa	Known RBP	4.09	□□□□□ -1.75
MSW1	YDR268W	APA1	P16550	321 aa	Known RBP	4.09	□□□□□ -1.75
MSW1	YDR268W	THR1	P17423	357 aa	Known RBP	4.09	□□□□□ -1.75
MSW1	YDR268W	PHO81	P17442	1178 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	ARG1	P22768	420 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	TRX2	P22803	104 aa	Known RBP	4.09	□□□□□ -1.75
MSW1	YDR268W	LRE1	P25579	583 aa	Known RBP	4.09	□□□□□ -1.75
MSW1	YDR268W	MSH1	P25846	959 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	ECM32	P32644	1121 aa	Known RBP	4.09	□□□□□ -1.75
MSW1	YDR268W	KDX1	P36005	433 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	CTP1	P38152	299 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	TDP1	P38319	544 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	YER130C	P39959	443 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	KHA1	P40309	873 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	GUF1	P46943	645 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	MAD3	P47074	515 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	MOT3	P54785	490 aa	Known RBP	4.09	□□□□□ -1.75
MSW1	YDR268W	RPA49	Q01080	415 aa	Predicted RBP	4.09	□□□□□ -1.75
MSW1	YDR268W	MZM1	Q03429	123 aa	Predicted RBP	4.09	□□□□□ -1.75
MSW1	YDR268W	YML053C	Q04978	212 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	IZH3	Q07959	543 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	YOL075C	Q08234	1294 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	YPQ1	Q12010	308 aa		4.09	□□□□□ -1.75
MSW1	YDR268W	PCT1	P13259	424 aa		4.08	□□□□□ -1.76
MSW1	YDR268W	HOM2	P13663	365 aa	Known RBP	4.08	□□□□□ -1.76
MSW1	YDR268W	PPH22	P23595	377 aa		4.08	□□□□□ -1.76
MSW1	YDR268W	SAT4	P25333	603 aa	Known RBP	4.08	□□□□□ -1.76
MSW1	YDR268W	YLF2	P38746	405 aa		4.08	□□□□□ -1.76
MSW1	YDR268W	PCL5	P38794	229 aa		4.08	□□□□□ -1.76
MSW1	YDR268W	AVT2	P39981	480 aa		4.08	□□□□□ -1.76
MSW1	YDR268W	CPR7	P47103	393 aa		4.08	□□□□□ -1.76
MSW1	YDR268W	COS5	P47187	383 aa		4.08	□□□□□ -1.76
MSW1	YDR268W	YGR054W	P53235	642 aa	Known RBP	4.08	□□□□□ -1.76
MSW1	YDR268W	SSL2	Q00578	843 aa		4.08	□□□□□ -1.76
MSW1	YDR268W	BSP1	Q06604	576 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms