RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C RPL15AP05748 204 aaKnown RBP2.15□□□□□ -2.07
PCF11YDR228C TPK1P06244 397 aa2.15□□□□□ -2.07
PCF11YDR228C ACH1P32316 526 aa2.15□□□□□ -2.07
PCF11YDR228C GRX7P38068 203 aa2.15□□□□□ -2.07
PCF11YDR228C UIP3P39547 235 aa2.15□□□□□ -2.07
PCF11YDR228C YTA12P40341 825 aa2.15□□□□□ -2.07
PCF11YDR228C PFK26P40433 827 aaKnown RBP2.15□□□□□ -2.07
PCF11YDR228C VPS4P52917 437 aa2.15□□□□□ -2.07
PCF11YDR228C MRPL13Q02204 264 aa2.15□□□□□ -2.07
PCF11YDR228C ERP1Q05359 219 aaKnown RBP2.15□□□□□ -2.07
PCF11YDR228C PSK2Q08217 1101 aa2.15□□□□□ -2.07
PCF11YDR228C ERG27Q12452 347 aaKnown RBP2.15□□□□□ -2.07
PCF11YDR228C CYB2P00175 591 aa2.14□□□□□ -2.07
PCF11YDR228C NUC1P08466 329 aa2.14□□□□□ -2.07
PCF11YDR228C PHO81P17442 1178 aa2.14□□□□□ -2.07
PCF11YDR228C ERG8P24521 451 aa2.14□□□□□ -2.07
PCF11YDR228C DED81P38707 554 aaKnown RBP2.14□□□□□ -2.07
PCF11YDR228C NNF2P53253 936 aa2.14□□□□□ -2.07
PCF11YDR228C TDA7P53882 636 aaPredicted RBP2.14□□□□□ -2.07
PCF11YDR228C INA17Q02888 182 aa2.14□□□□□ -2.07
PCF11YDR228C CSR1Q06705 408 aaKnown RBP2.14□□□□□ -2.07
PCF11YDR228C NKP1Q12493 238 aa2.14□□□□□ -2.07
PCF11YDR228C YOR019WQ99248 730 aa2.14□□□□□ -2.07
PCF11YDR228C APA1P16550 321 aaKnown RBP2.14□□□□□ -2.07
PCF11YDR228C TYR1P20049 452 aa2.14□□□□□ -2.07
PCF11YDR228C CDC15P27636 974 aa2.14□□□□□ -2.07
PCF11YDR228C ATS1P31386 333 aa2.14□□□□□ -2.07
PCF11YDR228C PSD1P39006 500 aa2.14□□□□□ -2.07
PCF11YDR228C SPG5P42933 373 aa2.14□□□□□ -2.07
PCF11YDR228C PYK2P52489 506 aaKnown RBP2.14□□□□□ -2.07
PCF11YDR228C STR3P53101 465 aaKnown RBP2.14□□□□□ -2.07
PCF11YDR228C RRT6P53117 311 aaPredicted RBP2.14□□□□□ -2.07
PCF11YDR228C MSS11Q03825 758 aa2.14□□□□□ -2.07
PCF11YDR228C RBA50Q04418 439 aa2.14□□□□□ -2.07
PCF11YDR228C THI20Q08224 551 aa2.14□□□□□ -2.07
PCF11YDR228C YLL056CQ12177 298 aa2.14□□□□□ -2.07
PCF11YDR228C INP53Q12271 1107 aa2.14□□□□□ -2.07
PCF11YDR228C GDH1P07262 454 aaKnown RBP2.13□□□□□ -2.07
PCF11YDR228C RPS2P25443 254 aaKnown RBP2.13□□□□□ -2.07
PCF11YDR228C MCM4P30665 933 aaKnown RBP2.13□□□□□ -2.07
PCF11YDR228C SNC1P31109 117 aa2.13□□□□□ -2.07
PCF11YDR228C XRS2P33301 854 aa2.13□□□□□ -2.07
PCF11YDR228C YKL050CP35736 922 aa2.13□□□□□ -2.07
PCF11YDR228C TIF5P38431 405 aaKnown RBP2.13□□□□□ -2.07
PCF11YDR228C SEC24P40482 926 aaKnown RBP2.13□□□□□ -2.07
PCF11YDR228C RPR2P40571 144 aa2.13□□□□□ -2.07
PCF11YDR228C YPI1P43587 155 aa2.13□□□□□ -2.07
PCF11YDR228C RPS10BP46784 105 aaKnown RBP2.13□□□□□ -2.07
PCF11YDR228C FMP45Q07651 309 aa2.13□□□□□ -2.07
PCF11YDR228C RDR1Q08904 546 aa2.13□□□□□ -2.07
PCF11YDR228C APL4Q12028 832 aa2.13□□□□□ -2.07
PCF11YDR228C RPB2P08518 1224 aaKnown RBP2.12□□□□□ -2.07
PCF11YDR228C SNF3P10870 884 aa2.12□□□□□ -2.07
PCF11YDR228C TIF3P34167 436 aaKnown RBP2.12□□□□□ -2.07
PCF11YDR228C RPH1P39956 796 aa2.12□□□□□ -2.07
PCF11YDR228C IME4P41833 600 aa2.12□□□□□ -2.07
PCF11YDR228C IKS1P47042 667 aa2.12□□□□□ -2.07
PCF11YDR228C RTT101P47050 842 aa2.12□□□□□ -2.07
PCF11YDR228C BNA1P47096 177 aa2.12□□□□□ -2.07
PCF11YDR228C REG1Q00816 1014 aa2.12□□□□□ -2.07
PCF11YDR228C BLS1Q06071 122 aa2.12□□□□□ -2.07
PCF11YDR228C RTT109Q07794 436 aa2.12□□□□□ -2.07
PCF11YDR228C PDH1Q12428 516 aaKnown RBP2.12□□□□□ -2.07
PCF11YDR228C PUT2P07275 575 aa2.11□□□□□ -2.07
PCF11YDR228C REV1P12689 985 aa2.11□□□□□ -2.07
PCF11YDR228C MCK1P21965 375 aaKnown RBP2.11□□□□□ -2.07
PCF11YDR228C TSC10P38342 320 aa2.11□□□□□ -2.07
PCF11YDR228C DIA4P38705 446 aaPredicted RBP2.11□□□□□ -2.07
PCF11YDR228C YNG2P38806 282 aaKnown RBP2.11□□□□□ -2.07
PCF11YDR228C AXL1P40851 1208 aa2.11□□□□□ -2.07
PCF11YDR228C YJL213WP40896 331 aa2.11□□□□□ -2.07
PCF11YDR228C YJL132WP47014 750 aa2.11□□□□□ -2.07
PCF11YDR228C SGM1P47166 707 aa2.11□□□□□ -2.07
PCF11YDR228C PIL1P53252 339 aaKnown RBP2.11□□□□□ -2.07
PCF11YDR228C SAM50P53969 484 aa2.11□□□□□ -2.07
PCF11YDR228C UBX4P54730 416 aa2.11□□□□□ -2.07
PCF11YDR228C MUB1Q03162 620 aa2.11□□□□□ -2.07
PCF11YDR228C YMR087WQ04299 284 aa2.11□□□□□ -2.07
PCF11YDR228C RPS10AQ08745 105 aaPredicted RBP2.11□□□□□ -2.07
PCF11YDR228C SAN1P22470 610 aa2.11□□□□□ -2.07
PCF11YDR228C LCB1P25045 558 aaKnown RBP2.11□□□□□ -2.07
PCF11YDR228C CMK1P27466 446 aaKnown RBP2.11□□□□□ -2.07
PCF11YDR228C RAD16P31244 790 aa2.11□□□□□ -2.07
PCF11YDR228C AGA1P32323 725 aa2.11□□□□□ -2.07
PCF11YDR228C SIP2P34164 415 aaKnown RBP2.11□□□□□ -2.07
PCF11YDR228C ECM15P35195 104 aa2.11□□□□□ -2.07
PCF11YDR228C RRP3P38712 501 aaKnown RBP2.11□□□□□ -2.07
PCF11YDR228C ANS1P38832 159 aa2.11□□□□□ -2.07
PCF11YDR228C MKT1P40850 830 aaKnown RBP2.11□□□□□ -2.07
PCF11YDR228C YFR016CP43597 1233 aaKnown RBP2.11□□□□□ -2.07
PCF11YDR228C SHE10P53075 577 aa2.11□□□□□ -2.07
PCF11YDR228C RCO1Q04779 684 aa2.11□□□□□ -2.07
PCF11YDR228C DIC1Q06143 298 aa2.11□□□□□ -2.07
PCF11YDR228C CDC45Q08032 650 aa2.11□□□□□ -2.07
PCF11YDR228C NYV1Q12255 253 aa2.11□□□□□ -2.07
PCF11YDR228C SET6Q12529 373 aa2.11□□□□□ -2.07
PCF11YDR228C YBR085C-AO43137 85 aa2.1□□□□□ -2.07
PCF11YDR228C YEF3P16521 1044 aaKnown RBP2.1□□□□□ -2.07
PCF11YDR228C SPC110P32380 944 aa2.1□□□□□ -2.07
PCF11YDR228C NDC1P32500 655 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms