RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W NDI1P32340 513 aa5.66□□□□□ -1.5
SHM1YBR263W AEP1P32493 518 aa5.66□□□□□ -1.5
SHM1YBR263W YME1P32795 747 aa5.66□□□□□ -1.5
SHM1YBR263W RPC37P36121 282 aa5.66□□□□□ -1.5
SHM1YBR263W SMX2P40204 77 aaKnown RBP5.66□□□□□ -1.5
SHM1YBR263W RAD26P40352 1085 aa5.66□□□□□ -1.5
SHM1YBR263W SER33P40510 469 aa5.66□□□□□ -1.5
SHM1YBR263W GLG2P47011 380 aa5.66□□□□□ -1.5
SHM1YBR263W SAP4P53036 818 aa5.66□□□□□ -1.5
SHM1YBR263W COG1P53079 417 aa5.66□□□□□ -1.5
SHM1YBR263W CPR6P53691 371 aaKnown RBP5.66□□□□□ -1.5
SHM1YBR263W SHR3Q02774 210 aa5.66□□□□□ -1.5
SHM1YBR263W YPR114WQ06107 315 aa5.66□□□□□ -1.5
SHM1YBR263W HOM2P13663 365 aaKnown RBP5.65□□□□□ -1.5
SHM1YBR263W PMA2P19657 947 aa5.65□□□□□ -1.5
SHM1YBR263W PRP6P19735 899 aaPredicted RBP5.65□□□□□ -1.5
SHM1YBR263W YSP3P25036 478 aa5.65□□□□□ -1.5
SHM1YBR263W HCM1P25364 564 aa5.65□□□□□ -1.5
SHM1YBR263W DCC1P25559 380 aa5.65□□□□□ -1.5
SHM1YBR263W KAR4P25583 335 aa5.65□□□□□ -1.5
SHM1YBR263W MSH2P25847 964 aa5.65□□□□□ -1.5
SHM1YBR263W URA10P30402 227 aa5.65□□□□□ -1.5
SHM1YBR263W PEX5P35056 612 aa5.65□□□□□ -1.5
SHM1YBR263W YKL077WP36081 392 aa5.65□□□□□ -1.5
SHM1YBR263W MEF2P39677 819 aa5.65□□□□□ -1.5
SHM1YBR263W GDH3P39708 457 aa5.65□□□□□ -1.5
SHM1YBR263W SEO1P39709 593 aa5.65□□□□□ -1.5
SHM1YBR263W SIP4P46954 829 aa5.65□□□□□ -1.5
SHM1YBR263W NPY1P53164 384 aa5.65□□□□□ -1.5
SHM1YBR263W CWC24P53769 259 aa5.65□□□□□ -1.5
SHM1YBR263W VAC7P53950 1165 aa5.65□□□□□ -1.5
SHM1YBR263W YDR132CQ03900 495 aa5.65□□□□□ -1.5
SHM1YBR263W PUS7Q08647 676 aaKnown RBP5.65□□□□□ -1.5
SHM1YBR263W RAD1P06777 1100 aa5.64□□□□□ -1.51
SHM1YBR263W INO1P11986 533 aa5.64□□□□□ -1.51
SHM1YBR263W HSP60P19882 572 aaKnown RBP5.64□□□□□ -1.51
SHM1YBR263W GDA1P32621 518 aa5.64□□□□□ -1.51
SHM1YBR263W PHO11P35842 467 aa5.64□□□□□ -1.51
SHM1YBR263W PHO12P38693 467 aa5.64□□□□□ -1.51
SHM1YBR263W FMO1P38866 432 aa5.64□□□□□ -1.51
SHM1YBR263W CCT2P39076 527 aaKnown RBP5.64□□□□□ -1.51
SHM1YBR263W GIP4P39732 760 aa5.64□□□□□ -1.51
SHM1YBR263W RGI2P40188 164 aa5.64□□□□□ -1.51
SHM1YBR263W GTS1P40956 396 aa5.64□□□□□ -1.51
SHM1YBR263W TES1P41903 349 aaKnown RBP5.64□□□□□ -1.51
SHM1YBR263W MDJ2P42834 146 aa5.64□□□□□ -1.51
SHM1YBR263W URB2P47108 1174 aa5.64□□□□□ -1.51
SHM1YBR263W ZIP2P53061 704 aa5.64□□□□□ -1.51
SHM1YBR263W NOP15P53927 220 aaPredicted RBP5.64□□□□□ -1.51
SHM1YBR263W TRS31Q03337 283 aa5.64□□□□□ -1.51
SHM1YBR263W USA1Q03714 838 aa5.64□□□□□ -1.51
SHM1YBR263W NHX1Q04121 633 aa5.64□□□□□ -1.51
SHM1YBR263W YDL177CQ12257 170 aa5.64□□□□□ -1.51
SHM1YBR263W RMD5Q12508 421 aa5.64□□□□□ -1.51
SHM1YBR263W YOR338WQ99326 363 aa5.64□□□□□ -1.51
SHM1YBR263W ARG4P04076 463 aaPredicted RBP5.64□□□□□ -1.51
SHM1YBR263W ERG20P08524 352 aaKnown RBP5.64□□□□□ -1.51
SHM1YBR263W MPH2P0CD99 609 aa5.64□□□□□ -1.51
SHM1YBR263W HSP26P15992 214 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
SHM1YBR263W BRF1P29056 596 aa5.64□□□□□ -1.51
SHM1YBR263W IMP3P32899 183 aaPredicted RBP5.64□□□□□ -1.51
SHM1YBR263W PMT1P33775 817 aa5.64□□□□□ -1.51
SHM1YBR263W MUD2P36084 527 aaKnown RBP5.64□□□□□ -1.51
SHM1YBR263W MRP21P38175 177 aa5.64□□□□□ -1.51
SHM1YBR263W GND1P38720 489 aaKnown RBP5.64□□□□□ -1.51
SHM1YBR263W ERP5P38819 212 aa5.64□□□□□ -1.51
SHM1YBR263W PXA1P41909 870 aa5.64□□□□□ -1.51
SHM1YBR263W SET2P46995 733 aaKnown RBP5.64□□□□□ -1.51
SHM1YBR263W NUP84P52891 726 aa5.64□□□□□ -1.51
SHM1YBR263W SPC105P53148 917 aa5.64□□□□□ -1.51
SHM1YBR263W SLT2Q00772 484 aa5.64□□□□□ -1.51
SHM1YBR263W YMR178WQ03219 274 aaKnown RBP5.64□□□□□ -1.51
SHM1YBR263W TPP1Q03796 238 aa5.64□□□□□ -1.51
SHM1YBR263W RPC11Q04307 110 aaPredicted RBP5.64□□□□□ -1.51
SHM1YBR263W MCP2Q06567 569 aa5.64□□□□□ -1.51
SHM1YBR263W FRT1Q99332 602 aa5.64□□□□□ -1.51
SHM1YBR263W RAD3P06839 778 aa5.63□□□□□ -1.51
SHM1YBR263W ILV2P07342 687 aaKnown RBP5.63□□□□□ -1.51
SHM1YBR263W GPA2P10823 449 aa5.63□□□□□ -1.51
SHM1YBR263W ATP12P22135 325 aa5.63□□□□□ -1.51
SHM1YBR263W MRPL25P23369 157 aa5.63□□□□□ -1.51
SHM1YBR263W EMC1P25574 760 aa5.63□□□□□ -1.51
SHM1YBR263W ILV6P25605 309 aaKnown RBP5.63□□□□□ -1.51
SHM1YBR263W CSE1P33307 960 aa5.63□□□□□ -1.51
SHM1YBR263W CTF13P35203 478 aa5.63□□□□□ -1.51
SHM1YBR263W ETR1P38071 380 aa5.63□□□□□ -1.51
SHM1YBR263W PPX1P38698 397 aa5.63□□□□□ -1.51
SHM1YBR263W SPC97P38863 823 aa5.63□□□□□ -1.51
SHM1YBR263W PIK1P39104 1066 aa5.63□□□□□ -1.51
SHM1YBR263W SAP1P39955 897 aaKnown RBP5.63□□□□□ -1.51
SHM1YBR263W YGL140CP53120 1219 aa5.63□□□□□ -1.51
SHM1YBR263W COG7P53195 279 aa5.63□□□□□ -1.51
SHM1YBR263W AQR1P53943 586 aa5.63□□□□□ -1.51
SHM1YBR263W EFM6P53970 246 aa5.63□□□□□ -1.51
SHM1YBR263W SMA1Q02651 245 aa5.63□□□□□ -1.51
SHM1YBR263W CLU1Q03690 1277 aaKnown RBP5.63□□□□□ -1.51
SHM1YBR263W YDR131CQ03899 556 aa5.63□□□□□ -1.51
SHM1YBR263W PPN1Q04119 674 aa5.63□□□□□ -1.51
SHM1YBR263W BUD22Q04347 519 aaKnown RBP5.63□□□□□ -1.51
SHM1YBR263W GSF2Q04697 403 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms