RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C SOF1P33750 489 aaKnown RBP4.49□□□□□ -1.69
NPL4YBR170C SEC66P33754 206 aa4.49□□□□□ -1.69
NPL4YBR170C UIP3P39547 235 aa4.49□□□□□ -1.69
NPL4YBR170C ECM10P39987 644 aa4.49□□□□□ -1.69
NPL4YBR170C MRX1P40050 688 aa4.49□□□□□ -1.69
NPL4YBR170C VMA13P41807 478 aaKnown RBP4.49□□□□□ -1.69
NPL4YBR170C DPB11P47027 764 aaPredicted RBP4.49□□□□□ -1.69
NPL4YBR170C YJL055WP47044 245 aa4.49□□□□□ -1.69
NPL4YBR170C IST1P53843 298 aaPredicted RBP4.49□□□□□ -1.69
NPL4YBR170C EFM6P53970 246 aa4.49□□□□□ -1.69
NPL4YBR170C KIN4Q01919 800 aa4.49□□□□□ -1.69
NPL4YBR170C PLM2Q04383 521 aa4.49□□□□□ -1.69
NPL4YBR170C ATG9Q12142 997 aa4.49□□□□□ -1.69
NPL4YBR170C CPR2P23285 205 aa4.49□□□□□ -1.69
NPL4YBR170C LHS1P36016 881 aa4.49□□□□□ -1.69
NPL4YBR170C GLG1P36143 616 aa4.49□□□□□ -1.69
NPL4YBR170C ALG5P40350 334 aa4.49□□□□□ -1.69
NPL4YBR170C HXT14P42833 540 aa4.49□□□□□ -1.69
NPL4YBR170C DLD2P46681 530 aaKnown RBP4.49□□□□□ -1.69
NPL4YBR170C DIA3P52290 468 aa4.49□□□□□ -1.69
NPL4YBR170C VPS73P53142 486 aaKnown RBP4.49□□□□□ -1.69
NPL4YBR170C FIN1Q03898 291 aa4.49□□□□□ -1.69
NPL4YBR170C GFD1Q04839 188 aaKnown RBP4.49□□□□□ -1.69
NPL4YBR170C HRD3Q05787 833 aa4.49□□□□□ -1.69
NPL4YBR170C INP53Q12271 1107 aa4.49□□□□□ -1.69
NPL4YBR170C SEC39Q12745 709 aa4.49□□□□□ -1.69
NPL4YBR170C SGS1P35187 1447 aa4.48□□□□□ -1.69
NPL4YBR170C PRD1P25375 712 aa4.48□□□□□ -1.69
NPL4YBR170C AAD3P25612 363 aa4.48□□□□□ -1.69
NPL4YBR170C BUD14P27637 709 aa4.48□□□□□ -1.69
NPL4YBR170C MRPL9P31334 269 aa4.48□□□□□ -1.69
NPL4YBR170C MGM1P32266 881 aa4.48□□□□□ -1.69
NPL4YBR170C YBR144CP34215 104 aa4.48□□□□□ -1.69
NPL4YBR170C SNU114P36048 1008 aaKnown RBP4.48□□□□□ -1.69
NPL4YBR170C PES4P39684 611 aa4.48□□□□□ -1.69
NPL4YBR170C MIT1P40002 666 aa4.48□□□□□ -1.69
NPL4YBR170C HOS2P53096 452 aaPredicted RBP4.48□□□□□ -1.69
NPL4YBR170C IPI3P53877 555 aa4.48□□□□□ -1.69
NPL4YBR170C WAR1Q03631 944 aa4.48□□□□□ -1.69
NPL4YBR170C SOV1Q04748 898 aa4.48□□□□□ -1.69
NPL4YBR170C RBS1Q05672 457 aaKnown RBP4.48□□□□□ -1.69
NPL4YBR170C GPM3Q12326 303 aa4.48□□□□□ -1.69
NPL4YBR170C PET111P08468 800 aa4.47□□□□□ -1.69
NPL4YBR170C MRP13P12686 339 aa4.47□□□□□ -1.69
NPL4YBR170C SNT1P25357 1226 aa4.47□□□□□ -1.69
NPL4YBR170C PUP3P25451 205 aaKnown RBP4.47□□□□□ -1.69
NPL4YBR170C YMC2P38087 329 aa4.47□□□□□ -1.69
NPL4YBR170C YHL017WP38745 532 aa4.47□□□□□ -1.69
NPL4YBR170C BDH2P39713 417 aa4.47□□□□□ -1.69
NPL4YBR170C ASG1P40467 964 aa4.47□□□□□ -1.69
NPL4YBR170C PKP1P40530 394 aa4.47□□□□□ -1.69
NPL4YBR170C YFR020WP43600 232 aa4.47□□□□□ -1.69
NPL4YBR170C APT1P49435 187 aaKnown RBP4.47□□□□□ -1.69
NPL4YBR170C CUE5Q08412 411 aaKnown RBP4.47□□□□□ -1.69
NPL4YBR170C SPE3Q12074 293 aaKnown RBP4.47□□□□□ -1.69
NPL4YBR170C MDM20Q12387 796 aaKnown RBP4.47□□□□□ -1.69
NPL4YBR170C APN1P22936 367 aa4.46□□□□□ -1.69
NPL4YBR170C OAR1P35731 278 aa4.46□□□□□ -1.69
NPL4YBR170C ADE17P38009 592 aaKnown RBP4.46□□□□□ -1.69
NPL4YBR170C ELO1P39540 310 aa4.46□□□□□ -1.69
NPL4YBR170C EFM4P40516 257 aa4.46□□□□□ -1.69
NPL4YBR170C CCT7P42943 550 aaKnown RBP4.46□□□□□ -1.69
NPL4YBR170C FAR3P46671 204 aa4.46□□□□□ -1.69
NPL4YBR170C YGL117WP53133 265 aa4.46□□□□□ -1.69
NPL4YBR170C KAP120Q02932 1032 aa4.46□□□□□ -1.69
NPL4YBR170C VTA1Q06263 330 aa4.46□□□□□ -1.69
NPL4YBR170C RTT109Q07794 436 aa4.46□□□□□ -1.69
NPL4YBR170C YOL159CQ08300 171 aa4.46□□□□□ -1.69
NPL4YBR170C NFI1Q12216 726 aa4.46□□□□□ -1.69
NPL4YBR170C AHA1Q12449 350 aaKnown RBP4.46□□□□□ -1.69
NPL4YBR170C FRE6Q12473 712 aa4.46□□□□□ -1.69
NPL4YBR170C RPL3P14126 387 aaKnown RBP4.46□□□□□ -1.7
NPL4YBR170C CLC1P17891 233 aa4.46□□□□□ -1.7
NPL4YBR170C PTC6P25646 442 aa4.46□□□□□ -1.7
NPL4YBR170C HXT3P32466 567 aaKnown RBP4.46□□□□□ -1.7
NPL4YBR170C RPN2P32565 945 aaKnown RBP4.46□□□□□ -1.7
NPL4YBR170C TFB1P32776 642 aa4.46□□□□□ -1.7
NPL4YBR170C CAK1P43568 368 aaPredicted RBP4.46□□□□□ -1.7
NPL4YBR170C YFL015CP43578 164 aa4.46□□□□□ -1.7
NPL4YBR170C CPR8P53728 308 aa4.46□□□□□ -1.7
NPL4YBR170C AAT1Q01802 451 aa4.46□□□□□ -1.7
NPL4YBR170C PRP42Q03776 544 aaKnown RBP4.46□□□□□ -1.7
NPL4YBR170C DPB4Q04603 196 aaKnown RBP4.46□□□□□ -1.7
NPL4YBR170C RSF1Q05043 376 aa4.46□□□□□ -1.7
NPL4YBR170C LEU9Q12166 604 aaKnown RBP4.46□□□□□ -1.7
NPL4YBR170C TAF3Q12297 353 aa4.46□□□□□ -1.7
NPL4YBR170C SKS1Q12505 502 aa4.46□□□□□ -1.7
NPL4YBR170C YJU2P28320 278 aaPredicted RBP4.45□□□□□ -1.7
NPL4YBR170C UGP1P32861 499 aaKnown RBP4.45□□□□□ -1.7
NPL4YBR170C POP2P39008 433 aa4.45□□□□□ -1.7
NPL4YBR170C STB2P46679 850 aa4.45□□□□□ -1.7
NPL4YBR170C CUL3P53202 744 aa4.45□□□□□ -1.7
NPL4YBR170C YPL107WQ02873 248 aa4.45□□□□□ -1.7
NPL4YBR170C LEA1Q08963 238 aaPredicted RBP4.45□□□□□ -1.7
NPL4YBR170C TPK2P06245 380 aa4.44□□□□□ -1.7
NPL4YBR170C ART10P18634 518 aaKnown RBP4.44□□□□□ -1.7
NPL4YBR170C IMG1P25626 169 aa4.44□□□□□ -1.7
NPL4YBR170C RML2P32611 393 aa4.44□□□□□ -1.7
NPL4YBR170C THI2P38141 450 aa4.44□□□□□ -1.7
NPL4YBR170C RRT2P38332 387 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms