RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	YNG2	P38806	282 aa	Known RBP	4.69	□□□□□ -1.66
UBS1	YBR165W	SLZ1	P40167	298 aa		4.69	□□□□□ -1.66
UBS1	YBR165W	PKP2	P53170	491 aa		4.69	□□□□□ -1.66
UBS1	YBR165W	VMS1	Q04311	632 aa	Known RBP	4.69	□□□□□ -1.66
UBS1	YBR165W	ADE13	Q05911	482 aa	Known RBP	4.69	□□□□□ -1.66
UBS1	YBR165W	APL4	Q12028	832 aa		4.69	□□□□□ -1.66
UBS1	YBR165W	BSC1	Q12140	328 aa		4.69	□□□□□ -1.66
UBS1	YBR165W	NKP1	Q12493	238 aa		4.69	□□□□□ -1.66
UBS1	YBR165W	DIA4	P38705	446 aa	Predicted RBP	4.68	□□□□□ -1.66
UBS1	YBR165W	FMP10	P40098	244 aa		4.68	□□□□□ -1.66
UBS1	YBR165W	YMR230W-A	Q3E7B5	62 aa		4.68	□□□□□ -1.66
UBS1	YBR165W	PGS1	P25578	521 aa		4.67	□□□□□ -1.66
UBS1	YBR165W	SLC1	P33333	303 aa		4.67	□□□□□ -1.66
UBS1	YBR165W	ERG7	P38604	731 aa		4.67	□□□□□ -1.66
UBS1	YBR165W	UBA4	P38820	440 aa		4.67	□□□□□ -1.66
UBS1	YBR165W	AXL2	P38928	823 aa		4.67	□□□□□ -1.66
UBS1	YBR165W	KAP123	P40069	1113 aa	Known RBP	4.67	□□□□□ -1.66
UBS1	YBR165W	INN1	P53901	409 aa		4.67	□□□□□ -1.66
UBS1	YBR165W	IOC4	Q04213	475 aa		4.67	□□□□□ -1.66
UBS1	YBR165W	SKG3	Q06315	1026 aa		4.67	□□□□□ -1.66
UBS1	YBR165W	NBP2	Q12163	236 aa		4.67	□□□□□ -1.66
UBS1	YBR165W	PDB1	P32473	366 aa	Known RBP	4.66	□□□□□ -1.66
UBS1	YBR165W	ALY1	P36117	915 aa		4.66	□□□□□ -1.66
UBS1	YBR165W	SPC34	P36131	295 aa		4.66	□□□□□ -1.66
UBS1	YBR165W	RIM2	P38127	377 aa		4.66	□□□□□ -1.66
UBS1	YBR165W	GUF1	P46943	645 aa		4.66	□□□□□ -1.66
UBS1	YBR165W	AAD10	P47182	288 aa		4.66	□□□□□ -1.66
UBS1	YBR165W	STR3	P53101	465 aa	Known RBP	4.66	□□□□□ -1.66
UBS1	YBR165W	SNO4	Q04902	237 aa		4.66	□□□□□ -1.66
UBS1	YBR165W	RTT103	Q05543	409 aa		4.66	□□□□□ -1.66
UBS1	YBR165W	HSP33	Q08914	237 aa	Known RBP	4.66	□□□□□ -1.66
UBS1	YBR165W	HSP32	Q08992	237 aa		4.66	□□□□□ -1.66
UBS1	YBR165W	PMS1	P14242	873 aa		4.65	□□□□□ -1.67
UBS1	YBR165W	GLN3	P18494	730 aa		4.65	□□□□□ -1.67
UBS1	YBR165W	SPE2	P21182	396 aa		4.65	□□□□□ -1.67
UBS1	YBR165W	LCB1	P25045	558 aa	Known RBP	4.65	□□□□□ -1.67
UBS1	YBR165W	TRS65	P32893	560 aa		4.65	□□□□□ -1.67
UBS1	YBR165W	SOL4	P53315	255 aa		4.65	□□□□□ -1.67
UBS1	YBR165W	RRN3	P36070	627 aa		4.64	□□□□□ -1.67
UBS1	YBR165W	MIC60	P36112	540 aa		4.64	□□□□□ -1.67
UBS1	YBR165W	SIP4	P46954	829 aa		4.64	□□□□□ -1.67
UBS1	YBR165W	SGM1	P47166	707 aa		4.64	□□□□□ -1.67
UBS1	YBR165W	CRZ1	P53968	678 aa		4.64	□□□□□ -1.67
UBS1	YBR165W	YDR415C	Q04033	374 aa	Predicted RBP	4.64	□□□□□ -1.67
UBS1	YBR165W	FUI1	P38196	639 aa		4.63	□□□□□ -1.67
UBS1	YBR165W	TSC10	P38342	320 aa		4.63	□□□□□ -1.67
UBS1	YBR165W	AZF1	P41696	914 aa		4.63	□□□□□ -1.67
UBS1	YBR165W	YML002W	P0CF17	737 aa		4.62	□□□□□ -1.67
UBS1	YBR165W	PWP1	P21304	576 aa	Known RBP	4.62	□□□□□ -1.67
UBS1	YBR165W	ANS1	P38832	159 aa		4.62	□□□□□ -1.67
UBS1	YBR165W	ELO1	P39540	310 aa		4.62	□□□□□ -1.67
UBS1	YBR165W	YER130C	P39959	443 aa		4.62	□□□□□ -1.67
UBS1	YBR165W	BUR6	P40096	142 aa		4.62	□□□□□ -1.67
UBS1	YBR165W	DIM1	P41819	318 aa	Known RBP	4.62	□□□□□ -1.67
UBS1	YBR165W	PYK2	P52489	506 aa	Known RBP	4.62	□□□□□ -1.67
UBS1	YBR165W	TMA64	Q04600	565 aa	Known RBP	4.62	□□□□□ -1.67
UBS1	YBR165W	PSR1	Q07800	427 aa		4.62	□□□□□ -1.67
UBS1	YBR165W	DAP1	Q12091	152 aa		4.62	□□□□□ -1.67
UBS1	YBR165W	ARP6	Q12509	438 aa		4.62	□□□□□ -1.67
UBS1	YBR165W	CSR2	Q12734	1121 aa		4.62	□□□□□ -1.67
UBS1	YBR165W	PUT2	P07275	575 aa		4.61	□□□□□ -1.67
UBS1	YBR165W	PHD1	P36093	366 aa		4.61	□□□□□ -1.67
UBS1	YBR165W	KTR3	P38130	404 aa	Predicted RBP	4.61	□□□□□ -1.67
UBS1	YBR165W	RPS10B	P46784	105 aa	Known RBP	4.61	□□□□□ -1.67
UBS1	YBR165W	YML131W	Q03102	365 aa		4.61	□□□□□ -1.67
UBS1	YBR165W	EMI2	Q04409	500 aa	Known RBP	4.61	□□□□□ -1.67
UBS1	YBR165W	RTT109	Q07794	436 aa		4.61	□□□□□ -1.67
UBS1	YBR165W	RDR1	Q08904	546 aa		4.61	□□□□□ -1.67
UBS1	YBR165W	SNF3	P10870	884 aa		4.6	□□□□□ -1.67
UBS1	YBR165W	ERG1	P32476	496 aa	Known RBP	4.6	□□□□□ -1.67
UBS1	YBR165W	YJR061W	P40355	935 aa		4.6	□□□□□ -1.67
UBS1	YBR165W	ARC1	P46672	376 aa	Known RBP	4.6	□□□□□ -1.67
UBS1	YBR165W	ERG26	P53199	349 aa	Known RBP	4.6	□□□□□ -1.67
UBS1	YBR165W	RIX7	Q07844	837 aa	Known RBP	4.6	□□□□□ -1.67
UBS1	YBR165W	RPS10A	Q08745	105 aa	Predicted RBP	4.6	□□□□□ -1.67
UBS1	YBR165W	ARG81	P05085	880 aa		4.59	□□□□□ -1.67
UBS1	YBR165W	FUM1	P08417	488 aa	Known RBP	4.59	□□□□□ -1.67
UBS1	YBR165W	ADH7	P25377	361 aa		4.59	□□□□□ -1.67
UBS1	YBR165W	MCM4	P30665	933 aa	Known RBP	4.59	□□□□□ -1.67
UBS1	YBR165W	SNC1	P31109	117 aa		4.59	□□□□□ -1.67
UBS1	YBR165W	DBP8	P38719	431 aa		4.59	□□□□□ -1.67
UBS1	YBR165W	RPS7B	P48164	190 aa	Known RBP	4.59	□□□□□ -1.67
UBS1	YBR165W	DIA3	P52290	468 aa		4.59	□□□□□ -1.67
UBS1	YBR165W	CBK1	P53894	756 aa		4.59	□□□□□ -1.67
UBS1	YBR165W	SCW10	Q04951	389 aa		4.59	□□□□□ -1.67
UBS1	YBR165W	YEH2	Q07950	538 aa		4.59	□□□□□ -1.67
UBS1	YBR165W	ETT1	Q08421	412 aa	Known RBP	4.59	□□□□□ -1.67
UBS1	YBR165W	LEU9	Q12166	604 aa	Known RBP	4.59	□□□□□ -1.67
UBS1	YBR165W	TIP41	Q12199	356 aa		4.59	□□□□□ -1.67
UBS1	YBR165W	MRS3	P10566	314 aa		4.58	□□□□□ -1.68
UBS1	YBR165W	ACH1	P32316	526 aa		4.58	□□□□□ -1.68
UBS1	YBR165W	DHH1	P39517	506 aa	Known RBP	4.58	□□□□□ -1.68
UBS1	YBR165W	YTA12	P40341	825 aa		4.58	□□□□□ -1.68
UBS1	YBR165W	MSS11	Q03825	758 aa		4.58	□□□□□ -1.68
UBS1	YBR165W	HCR1	Q05775	265 aa	Known RBP	4.58	□□□□□ -1.68
UBS1	YBR165W	SSP2	Q08646	371 aa		4.58	□□□□□ -1.68
UBS1	YBR165W	YBR298C-A	Q8TGK4	73 aa		4.58	□□□□□ -1.68
UBS1	YBR165W	PDA1	P16387	420 aa	Known RBP	4.57	□□□□□ -1.68
UBS1	YBR165W	TYR1	P20049	452 aa		4.57	□□□□□ -1.68
UBS1	YBR165W	VMA16	P23968	213 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms