RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 SEPT2Q15019 361 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 DPCR1Q3MIW9 517 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 ACCSLQ4AC99 568 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 GLE1Q53GS7 698 aaKnown RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 ARMC3Q5W041 872 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 NAA16Q6N069 864 aaPredicted RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 CCNI2Q6ZMN8 369 aaPredicted RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 APBB1IPQ7Z5R6 666 aaPredicted RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 DEFB132Q7Z7B7 95 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 KIRREL3Q8IZU9 778 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 TC2NQ8N9U0 490 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 FSIP1Q8NA03 581 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 ZNF496Q96IT1 587 aaPredicted RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 ZNF570Q96NI8 536 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 TRAPPC9Q96Q05 1148 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 CCT8L2Q96SF2 557 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 RUFY1Q96T51 708 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.78□□□□□ -1
CDKL5-211ENST00000637881 EHD4Q9H223 541 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 TRPV5Q9NQA5 729 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 UTP6Q9NYH9 597 aaKnown RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 CTNNAL1Q9UBT7 734 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 ITGB1BP2Q9UKP3 347 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 TMCO1Q9UM00 188 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 ADGRG1Q9Y653 693 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 CACNA1FO60840 1977 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 PRC1O43663 620 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 E2F6O75461 281 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 ANP32DO95626 131 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 FECHP22830 423 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 CCND1P24385 295 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 TNFRSF8P28908 595 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 KIF5BP33176 963 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 GJA8P48165 433 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 PDCLQ13371 301 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 MYBPC3Q14896 1274 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 KARSQ15046 597 aaKnown RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 TWISTNBQ3B726 338 aaPredicted RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 CFAP100Q494V2 611 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 ZNF569Q5MCW4 686 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 SPECC1LQ69YQ0 1117 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 RASGRP2Q7LDG7 609 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 CD302Q8IX05 232 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 RASEFQ8IZ41 740 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 ARFGAP2Q8N6H7 521 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 C8orf58Q8NAV2 365 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 NOA1Q8NC60 698 aaKnown RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 CCDC51Q96ER9 411 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 STAMBPL1Q96FJ0 436 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 MRPL44Q9H9J2 332 aaKnown RBP8.78□□□□□ -1
CDKL5-211ENST00000637881 ZNF510Q9Y2H8 683 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 SHANK3Q9BYB0 1731 aa8.78□□□□□ -1
CDKL5-211ENST00000637881 BCL9O00512 1426 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 GOLGA6L10A0A0M3HER8 536 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 TPD52L2O43399 206 aaKnown RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 HSF2BPO75031 334 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 ZNF24P17028 368 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 RPL13P26373 211 aaKnown RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 PIP4K2AP48426 406 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 EIF4A1P60842 406 aaKnown RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 AKAP17AQ02040 695 aaKnown RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 IFI16Q16666 785 aaKnown RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 SLC4A8Q2Y0W8 1093 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 FAM173BQ6P4H8 233 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 EMBQ6PCB8 327 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 CCDC80Q76M96 950 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 RNF168Q8IYW5 571 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 TSPYL6Q8N831 410 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 PROCA1Q8NCQ7 364 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 SNRNP27Q8WVK2 155 aaKnown RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 TEKT4Q8WW24 435 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 RIN2Q8WYP3 895 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 CAVIN3Q969G5 261 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 HSD3B7Q9H2F3 369 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 ATXN10Q9UBB4 475 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 SWAP70Q9UH65 585 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 CIDEBQ9UHD4 219 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 ZNF330Q9Y3S2 320 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-211ENST00000637881 PALLDQ8WX93 1383 aa8.77□□□□□ -1.01
CDKL5-211ENST00000637881 LOC102724428A0A0B4J2F2 783 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 ADD1P35611 737 aaKnown RBP8.76□□□□□ -1.01
CDKL5-211ENST00000637881 GNAQP50148 359 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 EPHB4P54760 987 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 SIK1P57059 783 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 ITIH3Q06033 890 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 EZH2Q15910 746 aaKnown RBP8.76□□□□□ -1.01
CDKL5-211ENST00000637881 ADALQ6DHV7 355 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 SYNE3Q6ZMZ3 975 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 TRAPPC11Q7Z392 1133 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 DNAJC10Q8IXB1 793 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 CYFIP2Q96F07 1278 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 SDF4Q9BRK5 362 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 OSBPL1AQ9BXW6 950 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 CWC25Q9NXE8 425 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-211ENST00000637881 CCNL1Q9UK58 526 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-211ENST00000637881 SYNRGQ9UMZ2 1314 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 HMGB1P1B2RPK0 211 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-211ENST00000637881 ATP6V1G1O75348 118 aa8.76□□□□□ -1.01
CDKL5-211ENST00000637881 SLC3A2P08195 630 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms