RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 FRMPD3Q5JV73 1810 aa28.5■■■□□ 2.15
ATXN3-253ENST00000621269 TSPY2A6NKD2 308 aa28.49■■■□□ 2.15
ATXN3-253ENST00000621269 KBTBD13C9JR72 458 aa28.49■■■□□ 2.15
ATXN3-253ENST00000621269 FOXP2O15409 715 aa28.49■■■□□ 2.15
ATXN3-253ENST00000621269 MYCNP04198 464 aaPredicted RBP28.49■■■□□ 2.15
ATXN3-253ENST00000621269 BMP3P12645 472 aa28.49■■■□□ 2.15
ATXN3-253ENST00000621269 GJC2Q5T442 439 aaPredicted RBP28.49■■■□□ 2.15
ATXN3-253ENST00000621269 TINF2Q9BSI4 451 aa28.49■■■□□ 2.15
ATXN3-253ENST00000621269 ATP2A1O14983 1001 aa28.48■■■□□ 2.15
ATXN3-253ENST00000621269 VPS53Q5VIR6 699 aa28.48■■■□□ 2.15
ATXN3-253ENST00000621269 B4GALNT3Q6L9W6 998 aa28.48■■■□□ 2.15
ATXN3-253ENST00000621269 TICAM2Q86XR7 235 aa28.48■■■□□ 2.15
ATXN3-253ENST00000621269 DDX11Q96FC9 970 aa28.48■■■□□ 2.15
ATXN3-253ENST00000621269 RIPK3Q9Y572 518 aa28.48■■■□□ 2.15
ATXN3-253ENST00000621269 TRIM6-TRIM34B2RNG4 842 aa28.47■■■□□ 2.15
ATXN3-253ENST00000621269 MAGEA10P43363 369 aaPredicted RBP28.47■■■□□ 2.15
ATXN3-253ENST00000621269 ATN1P54259 1190 aaPredicted RBP28.47■■■□□ 2.15
ATXN3-253ENST00000621269 MCMDC2Q4G0Z9 681 aa28.47■■■□□ 2.15
ATXN3-253ENST00000621269 SLC38A10Q9HBR0 1119 aa28.47■■■□□ 2.15
ATXN3-253ENST00000621269 RAVER2Q9HCJ3 691 aaKnown RBP28.47■■■□□ 2.15
ATXN3-253ENST00000621269 STX8Q9UNK0 236 aa28.47■■■□□ 2.15
ATXN3-253ENST00000621269 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.47■■■□□ 2.15
ATXN3-253ENST00000621269 MYH4Q9Y623 1939 aa28.46■■■□□ 2.15
ATXN3-253ENST00000621269 SMC5Q8IY18 1101 aa28.46■■■□□ 2.15
ATXN3-253ENST00000621269 FAM227BQ96M60 508 aa28.46■■■□□ 2.15
ATXN3-253ENST00000621269 INCENPQ9NQS7 918 aa28.46■■■□□ 2.15
ATXN3-253ENST00000621269 ANAPC4Q9UJX5 808 aa28.46■■■□□ 2.15
ATXN3-253ENST00000621269 TMEM232C9JQI7 657 aa28.45■■■□□ 2.14
ATXN3-253ENST00000621269 RANBP6O60518 1105 aaKnown RBP28.45■■■□□ 2.14
ATXN3-253ENST00000621269 ALX1Q15699 326 aa28.45■■■□□ 2.14
ATXN3-253ENST00000621269 RILPL2Q969X0 211 aa28.45■■■□□ 2.14
ATXN3-253ENST00000621269 CNPY2Q9Y2B0 182 aa28.45■■■□□ 2.14
ATXN3-253ENST00000621269 FDX1P10109 184 aa28.44■■■□□ 2.14
ATXN3-253ENST00000621269 RARBP10826 455 aa28.44■■■□□ 2.14
ATXN3-253ENST00000621269 SLC1A4P43007 532 aa28.44■■■□□ 2.14
ATXN3-253ENST00000621269 STAT2P52630 851 aa28.44■■■□□ 2.14
ATXN3-253ENST00000621269 OAZ1P54368 228 aa28.44■■■□□ 2.14
ATXN3-253ENST00000621269 IKQ13123 557 aaPredicted RBP28.44■■■□□ 2.14
ATXN3-253ENST00000621269 CHURC1Q8WUH1 139 aa28.44■■■□□ 2.14
ATXN3-253ENST00000621269 GMCL1Q96IK5 515 aa28.44■■■□□ 2.14
ATXN3-253ENST00000621269 FBXO40Q9UH90 709 aa28.44■■■□□ 2.14
ATXN3-253ENST00000621269 RANBP2P49792 3224 aaKnown RBP28.44■■■□□ 2.14
ATXN3-253ENST00000621269 TRIOBPQ9H2D6 2365 aa28.43■■■□□ 2.14
ATXN3-253ENST00000621269 A0A0D9SFI3 127 aa28.43■■■□□ 2.14
ATXN3-253ENST00000621269 FAM160B2Q86V87 743 aa28.43■■■□□ 2.14
ATXN3-253ENST00000621269 ANKRD35Q8N283 1001 aa28.43■■■□□ 2.14
ATXN3-253ENST00000621269 MSL3Q8N5Y2 521 aaKnown RBP28.43■■■□□ 2.14
ATXN3-253ENST00000621269 CHMP4CQ96CF2 233 aa28.43■■■□□ 2.14
ATXN3-253ENST00000621269 UBE2OQ9C0C9 1292 aaKnown RBP28.43■■■□□ 2.14
ATXN3-253ENST00000621269 TOMM22Q9NS69 142 aa28.43■■■□□ 2.14
ATXN3-253ENST00000621269 ZNFX1Q9P2E3 1918 aaKnown RBP28.42■■■□□ 2.14
ATXN3-253ENST00000621269 MCCP23508 829 aa28.42■■■□□ 2.14
ATXN3-253ENST00000621269 LRRC41Q15345 812 aa28.42■■■□□ 2.14
ATXN3-253ENST00000621269 CHD1LQ86WJ1 897 aa28.42■■■□□ 2.14
ATXN3-253ENST00000621269 CHST13Q8NET6 341 aa28.42■■■□□ 2.14
ATXN3-253ENST00000621269 STAG1Q8WVM7 1258 aa28.42■■■□□ 2.14
ATXN3-253ENST00000621269 XPNPEP3Q9NQH7 507 aa28.42■■■□□ 2.14
ATXN3-253ENST00000621269 IL17RBQ9NRM6 502 aa28.42■■■□□ 2.14
ATXN3-253ENST00000621269 ORC4O43929 436 aa28.41■■■□□ 2.14
ATXN3-253ENST00000621269 NMT2O60551 498 aa28.41■■■□□ 2.14
ATXN3-253ENST00000621269 FGAP02671 866 aa28.41■■■□□ 2.14
ATXN3-253ENST00000621269 TAL1P17542 331 aaPredicted RBP28.41■■■□□ 2.14
ATXN3-253ENST00000621269 RTP1P59025 263 aa28.41■■■□□ 2.14
ATXN3-253ENST00000621269 NMIQ13287 307 aaPredicted RBP28.41■■■□□ 2.14
ATXN3-253ENST00000621269 EXOC6Q8TAG9 804 aa28.41■■■□□ 2.14
ATXN3-253ENST00000621269 PRKAG2Q9UGJ0 569 aa28.41■■■□□ 2.14
ATXN3-253ENST00000621269 DNAJC25-GNG10A0A024R161 153 aa28.4■■■□□ 2.14
ATXN3-253ENST00000621269 IGHDP01880 384 aa28.4■■■□□ 2.14
ATXN3-253ENST00000621269 ZNF865P0CJ78 1059 aaPredicted RBP28.4■■■□□ 2.14
ATXN3-253ENST00000621269 AKR1A1P14550 325 aa28.4■■■□□ 2.14
ATXN3-253ENST00000621269 ADCYAP1R1P41586 468 aa28.4■■■□□ 2.14
ATXN3-253ENST00000621269 SLC39A5Q6ZMH5 540 aa28.4■■■□□ 2.14
ATXN3-253ENST00000621269 ATP11BQ9Y2G3 1177 aa28.4■■■□□ 2.14
ATXN3-253ENST00000621269 SYNGAP1Q96PV0 1343 aa28.4■■■□□ 2.14
ATXN3-253ENST00000621269 HSPD1P10809 573 aaKnown RBP28.39■■■□□ 2.14
ATXN3-253ENST00000621269 MDM2Q00987 491 aaPredicted RBP28.39■■■□□ 2.14
ATXN3-253ENST00000621269 NUCB1Q02818 461 aa28.39■■■□□ 2.14
ATXN3-253ENST00000621269 RRP12Q5JTH9 1297 aaKnown RBP28.39■■■□□ 2.14
ATXN3-253ENST00000621269 RCSD1Q6JBY9 416 aa28.39■■■□□ 2.14
ATXN3-253ENST00000621269 MAMDC4Q6UXC1 1216 aa28.39■■■□□ 2.14
ATXN3-253ENST00000621269 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.39■■■□□ 2.14
ATXN3-253ENST00000621269 RNF180Q86T96 592 aa28.39■■■□□ 2.14
ATXN3-253ENST00000621269 TDHQ8IZJ6 230 aa28.39■■■□□ 2.14
ATXN3-253ENST00000621269 LBHD1Q9BQE6 289 aaPredicted RBP28.39■■■□□ 2.14
ATXN3-253ENST00000621269 HOMER2Q9NSB8 354 aa28.39■■■□□ 2.14
ATXN3-253ENST00000621269 TACC3Q9Y6A5 838 aa28.39■■■□□ 2.14
ATXN3-253ENST00000621269 PLXNA1Q9UIW2 1896 aa28.38■■■□□ 2.13
ATXN3-253ENST00000621269 SOX1O00570 391 aaPredicted RBP28.38■■■□□ 2.13
ATXN3-253ENST00000621269 PLA2G6O60733 806 aa28.38■■■□□ 2.13
ATXN3-253ENST00000621269 FGRP09769 529 aa28.38■■■□□ 2.13
ATXN3-253ENST00000621269 MFAP1P55081 439 aaKnown RBP28.38■■■□□ 2.13
ATXN3-253ENST00000621269 KCTD1Q719H9 257 aa28.38■■■□□ 2.13
ATXN3-253ENST00000621269 ZNF467Q7Z7K2 595 aaPredicted RBP28.38■■■□□ 2.13
ATXN3-253ENST00000621269 ZNF589Q86UQ0 364 aaPredicted RBP28.38■■■□□ 2.13
ATXN3-253ENST00000621269 FERMT2Q96AC1 680 aa28.38■■■□□ 2.13
ATXN3-253ENST00000621269 MTMR7Q9Y216 660 aa28.38■■■□□ 2.13
ATXN3-253ENST00000621269 CCDC171Q6TFL3 1326 aa28.38■■■□□ 2.13
ATXN3-253ENST00000621269 PGK1P00558 417 aa28.37■■■□□ 2.13
ATXN3-253ENST00000621269 PLEKHM2Q8IWE5 1019 aa28.37■■■□□ 2.13
ATXN3-253ENST00000621269 FAM184BQ9ULE4 1060 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms