RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 ZKSCAN1P17029 563 aaPredicted RBP12.3□□□□□ -0.44
LINC01001-203ENST00000607448 MAPK4P31152 587 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 DSG3P32926 999 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 AK2P54819 239 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 UBXN2AP68543 259 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 MCMDC2Q4G0Z9 681 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 MORN1Q5T089 497 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 FAM83BQ5T0W9 1011 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 NKX2-3Q8TAU0 364 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 LPAR1Q92633 364 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 SH2D4AQ9H788 454 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 ZSWIM6Q9HCJ5 1215 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC01001-203ENST00000607448 CYP46A1Q9Y6A2 500 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 PLIN4Q96Q06 1357 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 WDR46O15213 610 aaKnown RBP12.3□□□□□ -0.44
LINC01001-203ENST00000607448 ZSCAN22P10073 491 aaPredicted RBP12.3□□□□□ -0.44
LINC01001-203ENST00000607448 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
LINC01001-203ENST00000607448 PSMA5P28066 241 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 GJA8P48165 433 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 NOL8Q76FK4 1167 aaKnown RBP12.3□□□□□ -0.44
LINC01001-203ENST00000607448 PLEKHH3Q7Z736 793 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 LRRC47Q8N1G4 583 aaKnown RBP12.3□□□□□ -0.44
LINC01001-203ENST00000607448 U2AF1L4Q8WU68 220 aaKnown RBP12.3□□□□□ -0.44
LINC01001-203ENST00000607448 NUDT12Q9BQG2 462 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 MOV10L1Q9BXT6 1211 aaKnown RBP12.3□□□□□ -0.44
LINC01001-203ENST00000607448 TMEM63CQ9P1W3 806 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 CLIP2Q9UDT6 1046 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 SMC3Q9UQE7 1217 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 DNAH12Q6ZR08 3092 aa12.3□□□□□ -0.44
LINC01001-203ENST00000607448 NMT2O60551 498 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 LETM1O95202 739 aaPredicted RBP12.29□□□□□ -0.44
LINC01001-203ENST00000607448 FGAP02671 866 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 HMGCRP04035 888 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 GJB1P08034 283 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 CASTP20810 708 aaKnown RBP12.29□□□□□ -0.44
LINC01001-203ENST00000607448 TFAP4Q01664 338 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 NECTIN1Q15223 517 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 RNF20Q5VTR2 975 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 RUFY3Q7L099 469 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 RASGRP2Q7LDG7 609 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 ZSCAN30Q86W11 494 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 TICAM2Q86XR7 235 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 ZNF444Q8N0Y2 327 aaPredicted RBP12.29□□□□□ -0.44
LINC01001-203ENST00000607448 PDLIM2Q96JY6 352 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 NBPF3Q9H094 633 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 SPATC1LQ9H0A9 340 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 RBSNQ9H1K0 784 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 ALDH8A1Q9H2A2 487 aaPredicted RBP12.29□□□□□ -0.44
LINC01001-203ENST00000607448 PAK6Q9NQU5 681 aaPredicted RBP12.29□□□□□ -0.44
LINC01001-203ENST00000607448 PDRG1Q9NUG6 133 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 HOXC10Q9NYD6 342 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 FLRT1Q9NZU1 646 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 NYAP2Q9P242 653 aa12.29□□□□□ -0.44
LINC01001-203ENST00000607448 SMCHD1A6NHR9 2005 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 F5H6K3 240 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 NDUFB10O96000 172 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 TSPY3P0CV98 308 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 TSPY8P0CW00 308 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 ERCC3P19447 782 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 PDE4BQ07343 736 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 KLRC3Q07444 240 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 TMEM132BQ14DG7 1078 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 ANKRD1Q15327 319 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 CCAR1Q8IX12 1150 aaKnown RBP12.28□□□□□ -0.44
LINC01001-203ENST00000607448 SOCS4Q8WXH5 440 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 MAP4K1Q92918 833 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 CHMP4CQ96CF2 233 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 DEFB118Q96PH6 123 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 GOPCQ9HD26 462 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 IL17RBQ9NRM6 502 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 RBM27Q9P2N5 1060 aaKnown RBP12.28□□□□□ -0.44
LINC01001-203ENST00000607448 ADAMTS5Q9UNA0 930 aa12.28□□□□□ -0.44
LINC01001-203ENST00000607448 STX6O43752 255 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 SGPL1O95470 568 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 PTPREP23469 700 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 HAND2P61296 217 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 CCNA1P78396 465 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 PTH1RQ03431 593 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 MAP2K5Q13163 448 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 GRB14Q14449 540 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 PLS1Q14651 629 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 ALX1Q15699 326 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 FOXD4L5Q5VV16 416 aaPredicted RBP12.27□□□□□ -0.44
LINC01001-203ENST00000607448 REPS2Q8NFH8 660 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 NEDD1Q8NHV4 660 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 NPLOC4Q8TAT6 608 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 FOXD4L4Q8WXT5 416 aaPredicted RBP12.27□□□□□ -0.44
LINC01001-203ENST00000607448 MKL1Q969V6 931 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 JAKMIP1Q96N16 626 aaKnown RBP12.27□□□□□ -0.44
LINC01001-203ENST00000607448 APBA2Q99767 749 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.27□□□□□ -0.44
LINC01001-203ENST00000607448 TSPY26PQ9H489 355 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 ANAPC4Q9UJX5 808 aa12.27□□□□□ -0.44
LINC01001-203ENST00000607448 RBM8AQ9Y5S9 174 aaKnown RBP12.27□□□□□ -0.44
LINC01001-203ENST00000607448 TTLL1O95922 423 aa12.26□□□□□ -0.45
LINC01001-203ENST00000607448 XRCC5P13010 732 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms