RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 LAMA2P24043 3122 aaKnown RBP21.27■■□□□ 1
HOMER3-208ENST00000595756 KBTBD13C9JR72 458 aa21.27■■□□□ 1
HOMER3-208ENST00000595756 FOXP2O15409 715 aa21.27■■□□□ 1
HOMER3-208ENST00000595756 PGK2P07205 417 aa21.27■■□□□ 1
HOMER3-208ENST00000595756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.27■■□□□ 1
HOMER3-208ENST00000595756 LRRC47Q8N1G4 583 aaKnown RBP21.27■■□□□ 1
HOMER3-208ENST00000595756 TINF2Q9BSI4 451 aa21.27■■□□□ 1
HOMER3-208ENST00000595756 FEM1BQ9UK73 627 aa21.27■■□□□ 1
HOMER3-208ENST00000595756 PDE1AP54750 535 aa21.26■□□□□ 0.99
HOMER3-208ENST00000595756 NUCB1Q02818 461 aa21.26■□□□□ 0.99
HOMER3-208ENST00000595756 PPP4R3BQ5MIZ7 849 aa21.26■□□□□ 0.99
HOMER3-208ENST00000595756 GJC2Q5T442 439 aaPredicted RBP21.26■□□□□ 0.99
HOMER3-208ENST00000595756 TICAM2Q86XR7 235 aa21.26■□□□□ 0.99
HOMER3-208ENST00000595756 SLC38A10Q9HBR0 1119 aa21.26■□□□□ 0.99
HOMER3-208ENST00000595756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.26■□□□□ 0.99
HOMER3-208ENST00000595756 SMCHD1A6NHR9 2005 aa21.25■□□□□ 0.99
HOMER3-208ENST00000595756 SOX1O00570 391 aaPredicted RBP21.25■□□□□ 0.99
HOMER3-208ENST00000595756 ZBED4O75132 1171 aa21.25■□□□□ 0.99
HOMER3-208ENST00000595756 OAZ1P54368 228 aa21.25■□□□□ 0.99
HOMER3-208ENST00000595756 FAM47AQ5JRC9 791 aa21.25■□□□□ 0.99
HOMER3-208ENST00000595756 PRAMEF19Q5SWL8 479 aa21.25■□□□□ 0.99
HOMER3-208ENST00000595756 ANO1Q5XXA6 986 aa21.25■□□□□ 0.99
HOMER3-208ENST00000595756 CCDC129Q6ZRS4 1044 aa21.25■□□□□ 0.99
HOMER3-208ENST00000595756 CHD1LQ86WJ1 897 aa21.25■□□□□ 0.99
HOMER3-208ENST00000595756 TDHQ8IZJ6 230 aa21.25■□□□□ 0.99
HOMER3-208ENST00000595756 MSL3Q8N5Y2 521 aaKnown RBP21.25■□□□□ 0.99
HOMER3-208ENST00000595756 TFAP4Q01664 338 aa21.24■□□□□ 0.99
HOMER3-208ENST00000595756 B4GALNT3Q6L9W6 998 aa21.24■□□□□ 0.99
HOMER3-208ENST00000595756 KIFC2Q96AC6 838 aa21.24■□□□□ 0.99
HOMER3-208ENST00000595756 HELLSQ9NRZ9 838 aa21.24■□□□□ 0.99
HOMER3-208ENST00000595756 ANAPC4Q9UJX5 808 aa21.24■□□□□ 0.99
HOMER3-208ENST00000595756 CTDP1Q9Y5B0 961 aaPredicted RBP21.24■□□□□ 0.99
HOMER3-208ENST00000595756 SYNGAP1Q96PV0 1343 aa21.24■□□□□ 0.99
HOMER3-208ENST00000595756 COL6A3P12111 3177 aa21.24■□□□□ 0.99
HOMER3-208ENST00000595756 FDX1P10109 184 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 RARBP10826 455 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 BMP3P12645 472 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 ATN1P54259 1190 aaPredicted RBP21.23■□□□□ 0.99
HOMER3-208ENST00000595756 RTP1P59025 263 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 SNX17Q15036 470 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 LRRC41Q15345 812 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 LRIT3Q3SXY7 679 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 SLFN13Q68D06 897 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 GMCL1Q96IK5 515 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 UBE2OQ9C0C9 1292 aaKnown RBP21.23■□□□□ 0.99
HOMER3-208ENST00000595756 RIPK3Q9Y572 518 aa21.23■□□□□ 0.99
HOMER3-208ENST00000595756 DNAJC25-GNG10A0A024R161 153 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 ZNF865P0CJ78 1059 aaPredicted RBP21.22■□□□□ 0.99
HOMER3-208ENST00000595756 AKR1A1P14550 325 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 STAT2P52630 851 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 GPR153Q6NV75 609 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 ZNF467Q7Z7K2 595 aaPredicted RBP21.22■□□□□ 0.99
HOMER3-208ENST00000595756 LRCH3Q96II8 777 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 LNPKQ9C0E8 428 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 XPNPEP3Q9NQH7 507 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 FBXO40Q9UH90 709 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 CNPY2Q9Y2B0 182 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 ZMYM6O95789 1325 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 LAMA4Q16363 1823 aa21.22■□□□□ 0.99
HOMER3-208ENST00000595756 MCM3APO60318 1980 aa21.21■□□□□ 0.99
HOMER3-208ENST00000595756 TSPY2A6NKD2 308 aa21.21■□□□□ 0.99
HOMER3-208ENST00000595756 ALX1Q15699 326 aa21.21■□□□□ 0.99
HOMER3-208ENST00000595756 VPS53Q5VIR6 699 aa21.21■□□□□ 0.99
HOMER3-208ENST00000595756 C1orf53Q5VUE5 145 aa21.21■□□□□ 0.99
HOMER3-208ENST00000595756 MAMDC4Q6UXC1 1216 aa21.21■□□□□ 0.99
HOMER3-208ENST00000595756 CPXCR1Q8N123 301 aa21.21■□□□□ 0.99
HOMER3-208ENST00000595756 CHST13Q8NET6 341 aa21.21■□□□□ 0.99
HOMER3-208ENST00000595756 RAVER2Q9HCJ3 691 aaKnown RBP21.21■□□□□ 0.99
HOMER3-208ENST00000595756 LRRC37A2A6NM11 1700 aa21.21■□□□□ 0.99
HOMER3-208ENST00000595756 ORC4O43929 436 aa21.2■□□□□ 0.98
HOMER3-208ENST00000595756 CTDSPL2Q05D32 466 aa21.2■□□□□ 0.98
HOMER3-208ENST00000595756 SLC39A5Q6ZMH5 540 aa21.2■□□□□ 0.98
HOMER3-208ENST00000595756 CENPQQ7L2Z9 268 aaPredicted RBP21.2■□□□□ 0.98
HOMER3-208ENST00000595756 FAM160B2Q86V87 743 aa21.2■□□□□ 0.98
HOMER3-208ENST00000595756 DDX11Q96FC9 970 aa21.2■□□□□ 0.98
HOMER3-208ENST00000595756 PRKAG2Q9UGJ0 569 aa21.2■□□□□ 0.98
HOMER3-208ENST00000595756 STX8Q9UNK0 236 aa21.2■□□□□ 0.98
HOMER3-208ENST00000595756 PHF24Q9UPV7 400 aa21.2■□□□□ 0.98
HOMER3-208ENST00000595756 A0A0D9SFI3 127 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 TMEM232C9JQI7 657 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 PLA2G6O60733 806 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 FGRP09769 529 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 TAL1P17542 331 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-208ENST00000595756 SLC1A4P43007 532 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 NOVP48745 357 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 MDM2Q00987 491 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-208ENST00000595756 RNF180Q86T96 592 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 CHURC1Q8WUH1 139 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 CCDC136Q96JN2 1154 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 ATP11BQ9Y2G3 1177 aa21.19■□□□□ 0.98
HOMER3-208ENST00000595756 MYCNP04198 464 aaPredicted RBP21.18■□□□□ 0.98
HOMER3-208ENST00000595756 ADCYAP1R1P41586 468 aa21.18■□□□□ 0.98
HOMER3-208ENST00000595756 MCMDC2Q4G0Z9 681 aa21.18■□□□□ 0.98
HOMER3-208ENST00000595756 ANKRD35Q8N283 1001 aa21.18■□□□□ 0.98
HOMER3-208ENST00000595756 STAG1Q8WVM7 1258 aa21.18■□□□□ 0.98
HOMER3-208ENST00000595756 FAM227BQ96M60 508 aa21.18■□□□□ 0.98
HOMER3-208ENST00000595756 LBHD1Q9BQE6 289 aaPredicted RBP21.18■□□□□ 0.98
HOMER3-208ENST00000595756 IL17RBQ9NRM6 502 aa21.18■□□□□ 0.98
HOMER3-208ENST00000595756 ADAMTS4O75173 837 aa21.17■□□□□ 0.98
HOMER3-208ENST00000595756 TRIM60Q495X7 471 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms