RNA–Protein interactions for RNA: ENST00000594794.5

HOMER3-207, Transcript of homer scaffold protein 3, humanhuman

TSL 5 BASIC

Gene HOMER3, Length 903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-207ENST00000594794 CHMP4CQ96CF2 233 aa28.75■■■□□ 2.19
HOMER3-207ENST00000594794 HELLSQ9NRZ9 838 aa28.75■■■□□ 2.19
HOMER3-207ENST00000594794 NUCB1Q02818 461 aa28.74■■■□□ 2.19
HOMER3-207ENST00000594794 NMIQ13287 307 aaPredicted RBP28.74■■■□□ 2.19
HOMER3-207ENST00000594794 PLEKHM2Q8IWE5 1019 aa28.74■■■□□ 2.19
HOMER3-207ENST00000594794 TDHQ8IZJ6 230 aa28.74■■■□□ 2.19
HOMER3-207ENST00000594794 SLF1Q9BQI6 1058 aa28.74■■■□□ 2.19
HOMER3-207ENST00000594794 SOX1O00570 391 aaPredicted RBP28.73■■■□□ 2.19
HOMER3-207ENST00000594794 TTLL1O95922 423 aa28.73■■■□□ 2.19
HOMER3-207ENST00000594794 KCTD2Q14681 263 aa28.73■■■□□ 2.19
HOMER3-207ENST00000594794 MMP19Q99542 508 aa28.73■■■□□ 2.19
HOMER3-207ENST00000594794 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.73■■■□□ 2.19
HOMER3-207ENST00000594794 ATP2A1O14983 1001 aa28.72■■■□□ 2.19
HOMER3-207ENST00000594794 MCMDC2Q4G0Z9 681 aa28.72■■■□□ 2.19
HOMER3-207ENST00000594794 ZNF589Q86UQ0 364 aaPredicted RBP28.72■■■□□ 2.19
HOMER3-207ENST00000594794 PLIN4Q96Q06 1357 aa28.72■■■□□ 2.19
HOMER3-207ENST00000594794 IRX6P78412 446 aaPredicted RBP28.71■■■□□ 2.19
HOMER3-207ENST00000594794 ZNF792Q3KQV3 632 aa28.71■■■□□ 2.19
HOMER3-207ENST00000594794 MSL3Q8N5Y2 521 aaKnown RBP28.71■■■□□ 2.19
HOMER3-207ENST00000594794 PRPF38AQ8NAV1 312 aaKnown RBP28.71■■■□□ 2.19
HOMER3-207ENST00000594794 TEX13BQ9BXU2 312 aa28.71■■■□□ 2.19
HOMER3-207ENST00000594794 UBE2OQ9C0C9 1292 aaKnown RBP28.71■■■□□ 2.19
HOMER3-207ENST00000594794 KBTBD13C9JR72 458 aa28.7■■■□□ 2.18
HOMER3-207ENST00000594794 NMT2O60551 498 aa28.7■■■□□ 2.18
HOMER3-207ENST00000594794 PGK2P07205 417 aa28.7■■■□□ 2.18
HOMER3-207ENST00000594794 SLC4A3P48751 1232 aa28.7■■■□□ 2.18
HOMER3-207ENST00000594794 PRAMEF19Q5SWL8 479 aa28.7■■■□□ 2.18
HOMER3-207ENST00000594794 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.7■■■□□ 2.18
HOMER3-207ENST00000594794 KIFC2Q96AC6 838 aa28.7■■■□□ 2.18
HOMER3-207ENST00000594794 MYH4Q9Y623 1939 aa28.7■■■□□ 2.18
HOMER3-207ENST00000594794 TSPY2A6NKD2 308 aa28.69■■■□□ 2.18
HOMER3-207ENST00000594794 ALX1Q15699 326 aa28.69■■■□□ 2.18
HOMER3-207ENST00000594794 C1orf53Q5VUE5 145 aa28.69■■■□□ 2.18
HOMER3-207ENST00000594794 SLFN13Q68D06 897 aa28.69■■■□□ 2.18
HOMER3-207ENST00000594794 GMCL1P1Q8NEA9 526 aa28.69■■■□□ 2.18
HOMER3-207ENST00000594794 LRCH3Q96II8 777 aa28.69■■■□□ 2.18
HOMER3-207ENST00000594794 TINF2Q9BSI4 451 aa28.69■■■□□ 2.18
HOMER3-207ENST00000594794 ISY1Q9ULR0 285 aaKnown RBP28.69■■■□□ 2.18
HOMER3-207ENST00000594794 RANBP6O60518 1105 aaKnown RBP28.68■■■□□ 2.18
HOMER3-207ENST00000594794 FGAP02671 866 aa28.68■■■□□ 2.18
HOMER3-207ENST00000594794 SNX17Q15036 470 aa28.68■■■□□ 2.18
HOMER3-207ENST00000594794 GJC2Q5T442 439 aaPredicted RBP28.68■■■□□ 2.18
HOMER3-207ENST00000594794 ANO1Q5XXA6 986 aa28.68■■■□□ 2.18
HOMER3-207ENST00000594794 CPXCR1Q8N123 301 aa28.68■■■□□ 2.18
HOMER3-207ENST00000594794 IL17RBQ9NRM6 502 aa28.68■■■□□ 2.18
HOMER3-207ENST00000594794 ANAPC4Q9UJX5 808 aa28.68■■■□□ 2.18
HOMER3-207ENST00000594794 RIPK3Q9Y572 518 aa28.68■■■□□ 2.18
HOMER3-207ENST00000594794 HSPD1P10809 573 aaKnown RBP28.67■■■□□ 2.18
HOMER3-207ENST00000594794 PPP4R3BQ5MIZ7 849 aa28.67■■■□□ 2.18
HOMER3-207ENST00000594794 SNRNP48Q6IEG0 339 aaKnown RBP28.67■■■□□ 2.18
HOMER3-207ENST00000594794 TICAM2Q86XR7 235 aa28.67■■■□□ 2.18
HOMER3-207ENST00000594794 PLXNA1Q9UIW2 1896 aa28.67■■■□□ 2.18
HOMER3-207ENST00000594794 FDX1P10109 184 aa28.66■■■□□ 2.18
HOMER3-207ENST00000594794 SDSP20132 328 aa28.66■■■□□ 2.18
HOMER3-207ENST00000594794 RTP1P59025 263 aa28.66■■■□□ 2.18
HOMER3-207ENST00000594794 LRRC41Q15345 812 aa28.66■■■□□ 2.18
HOMER3-207ENST00000594794 SLC39A5Q6ZMH5 540 aa28.66■■■□□ 2.18
HOMER3-207ENST00000594794 OSBPL3Q9H4L5 887 aa28.66■■■□□ 2.18
HOMER3-207ENST00000594794 RAVER2Q9HCJ3 691 aaKnown RBP28.66■■■□□ 2.18
HOMER3-207ENST00000594794 TOMM22Q9NS69 142 aa28.66■■■□□ 2.18
HOMER3-207ENST00000594794 FEM1BQ9UK73 627 aa28.66■■■□□ 2.18
HOMER3-207ENST00000594794 STX8Q9UNK0 236 aa28.66■■■□□ 2.18
HOMER3-207ENST00000594794 SMCHD1A6NHR9 2005 aa28.65■■■□□ 2.18
HOMER3-207ENST00000594794 ZBED4O75132 1171 aa28.65■■■□□ 2.18
HOMER3-207ENST00000594794 BMP3P12645 472 aa28.65■■■□□ 2.18
HOMER3-207ENST00000594794 OAZ1P54368 228 aa28.65■■■□□ 2.18
HOMER3-207ENST00000594794 HAND2P61296 217 aa28.65■■■□□ 2.18
HOMER3-207ENST00000594794 RRP12Q5JTH9 1297 aaKnown RBP28.65■■■□□ 2.18
HOMER3-207ENST00000594794 RASGRP2Q7LDG7 609 aa28.65■■■□□ 2.18
HOMER3-207ENST00000594794 PRKAG2Q9UGJ0 569 aa28.65■■■□□ 2.18
HOMER3-207ENST00000594794 MTMR7Q9Y216 660 aa28.65■■■□□ 2.18
HOMER3-207ENST00000594794 CTDP1Q9Y5B0 961 aaPredicted RBP28.65■■■□□ 2.18
HOMER3-207ENST00000594794 CCDC171Q6TFL3 1326 aa28.65■■■□□ 2.18
HOMER3-207ENST00000594794 DNAJC25-GNG10A0A024R161 153 aa28.64■■■□□ 2.18
HOMER3-207ENST00000594794 TMEM232C9JQI7 657 aa28.64■■■□□ 2.18
HOMER3-207ENST00000594794 RARBP10826 455 aa28.64■■■□□ 2.18
HOMER3-207ENST00000594794 MCCP23508 829 aa28.64■■■□□ 2.18
HOMER3-207ENST00000594794 ATN1P54259 1190 aaPredicted RBP28.64■■■□□ 2.18
HOMER3-207ENST00000594794 MAMDC4Q6UXC1 1216 aa28.64■■■□□ 2.18
HOMER3-207ENST00000594794 ZNF467Q7Z7K2 595 aaPredicted RBP28.64■■■□□ 2.18
HOMER3-207ENST00000594794 LBHD1Q9BQE6 289 aaPredicted RBP28.64■■■□□ 2.18
HOMER3-207ENST00000594794 SLC38A10Q9HBR0 1119 aa28.64■■■□□ 2.18
HOMER3-207ENST00000594794 SYNGAP1Q96PV0 1343 aa28.64■■■□□ 2.17
HOMER3-207ENST00000594794 ORC4O43929 436 aa28.63■■■□□ 2.17
HOMER3-207ENST00000594794 FBXO40Q9UH90 709 aa28.63■■■□□ 2.17
HOMER3-207ENST00000594794 DNAH12Q6ZR08 3092 aa28.62■■■□□ 2.17
HOMER3-207ENST00000594794 ZNF865P0CJ78 1059 aaPredicted RBP28.62■■■□□ 2.17
HOMER3-207ENST00000594794 AKR1A1P14550 325 aa28.62■■■□□ 2.17
HOMER3-207ENST00000594794 MDM2Q00987 491 aaPredicted RBP28.62■■■□□ 2.17
HOMER3-207ENST00000594794 XPNPEP3Q9NQH7 507 aa28.62■■■□□ 2.17
HOMER3-207ENST00000594794 PHF24Q9UPV7 400 aa28.62■■■□□ 2.17
HOMER3-207ENST00000594794 CNPY2Q9Y2B0 182 aa28.62■■■□□ 2.17
HOMER3-207ENST00000594794 SLC1A4P43007 532 aa28.61■■■□□ 2.17
HOMER3-207ENST00000594794 IKQ13123 557 aaPredicted RBP28.61■■■□□ 2.17
HOMER3-207ENST00000594794 CWC27Q6UX04 472 aaKnown RBP28.61■■■□□ 2.17
HOMER3-207ENST00000594794 KCTD1Q719H9 257 aa28.61■■■□□ 2.17
HOMER3-207ENST00000594794 RNF180Q86T96 592 aa28.61■■■□□ 2.17
HOMER3-207ENST00000594794 CHST13Q8NET6 341 aa28.61■■■□□ 2.17
HOMER3-207ENST00000594794 DDX11Q96FC9 970 aa28.61■■■□□ 2.17
HOMER3-207ENST00000594794 GMCL1Q96IK5 515 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms