RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 ZNF214Q9UL59 606 aaPredicted RBP23.65■■□□□ 1.38
COPE-204ENST00000593827 TMEM232C9JQI7 657 aa23.64■■□□□ 1.37
COPE-204ENST00000593827 NEFLP07196 543 aa23.64■■□□□ 1.37
COPE-204ENST00000593827 CHMLP26374 656 aa23.64■■□□□ 1.37
COPE-204ENST00000593827 OLFML2BQ68BL8 750 aa23.64■■□□□ 1.37
COPE-204ENST00000593827 RCSD1Q6JBY9 416 aa23.64■■□□□ 1.37
COPE-204ENST00000593827 DCAF4Q8WV16 495 aa23.64■■□□□ 1.37
COPE-204ENST00000593827 MMP19Q99542 508 aa23.64■■□□□ 1.37
COPE-204ENST00000593827 KRT23Q9C075 422 aa23.64■■□□□ 1.37
COPE-204ENST00000593827 FBXO40Q9UH90 709 aa23.64■■□□□ 1.37
COPE-204ENST00000593827 NMT2O60551 498 aa23.63■■□□□ 1.37
COPE-204ENST00000593827 FARP2O94887 1054 aaPredicted RBP23.63■■□□□ 1.37
COPE-204ENST00000593827 MCCP23508 829 aa23.63■■□□□ 1.37
COPE-204ENST00000593827 CACNB2Q08289 660 aaPredicted RBP23.63■■□□□ 1.37
COPE-204ENST00000593827 PRPF38BQ5VTL8 546 aaKnown RBP23.63■■□□□ 1.37
COPE-204ENST00000593827 SNRNP48Q6IEG0 339 aaKnown RBP23.63■■□□□ 1.37
COPE-204ENST00000593827 TBC1D10CQ8IV04 446 aa23.63■■□□□ 1.37
COPE-204ENST00000593827 ANKLE1Q8NAG6 615 aa23.63■■□□□ 1.37
COPE-204ENST00000593827 REPS2Q8NFH8 660 aa23.63■■□□□ 1.37
COPE-204ENST00000593827 SHISA4Q96DD7 197 aa23.63■■□□□ 1.37
COPE-204ENST00000593827 HTATIP2Q9BUP3 242 aa23.63■■□□□ 1.37
COPE-204ENST00000593827 CRISPLD2Q9H0B8 497 aa23.63■■□□□ 1.37
COPE-204ENST00000593827 SLC38A10Q9HBR0 1119 aa23.63■■□□□ 1.37
COPE-204ENST00000593827 A0A0G2JMZ2 1700 aa23.62■■□□□ 1.37
COPE-204ENST00000593827 MSCO60682 206 aa23.62■■□□□ 1.37
COPE-204ENST00000593827 CCL14Q16627 93 aa23.62■■□□□ 1.37
COPE-204ENST00000593827 TACC3Q9Y6A5 838 aa23.62■■□□□ 1.37
COPE-204ENST00000593827 DOCK3Q8IZD9 2030 aa23.62■■□□□ 1.37
COPE-204ENST00000593827 TRIM32Q13049 653 aa23.61■■□□□ 1.37
COPE-204ENST00000593827 CCDC96Q2M329 555 aa23.61■■□□□ 1.37
COPE-204ENST00000593827 DGKHQ86XP1 1220 aa23.61■■□□□ 1.37
COPE-204ENST00000593827 DIS3Q9Y2L1 958 aaKnown RBP23.61■■□□□ 1.37
COPE-204ENST00000593827 U3KPZ7 1027 aaPredicted RBP23.61■■□□□ 1.37
COPE-204ENST00000593827 TRDNQ13061 729 aa23.6■■□□□ 1.37
COPE-204ENST00000593827 CPXCR1Q8N123 301 aa23.6■■□□□ 1.37
COPE-204ENST00000593827 CHST13Q8NET6 341 aa23.6■■□□□ 1.37
COPE-204ENST00000593827 NPLOC4Q8TAT6 608 aa23.6■■□□□ 1.37
COPE-204ENST00000593827 TMEM47Q9BQJ4 181 aa23.6■■□□□ 1.37
COPE-204ENST00000593827 NBPF3Q9H094 633 aa23.6■■□□□ 1.37
COPE-204ENST00000593827 BRCA2P51587 3418 aa23.59■■□□□ 1.37
COPE-204ENST00000593827 KIAA1211Q6ZU35 1233 aa23.59■■□□□ 1.37
COPE-204ENST00000593827 DDX11Q96FC9 970 aa23.59■■□□□ 1.37
COPE-204ENST00000593827 CCDC136Q96JN2 1154 aa23.59■■□□□ 1.37
COPE-204ENST00000593827 PNMA2Q9UL42 364 aa23.59■■□□□ 1.37
COPE-204ENST00000593827 RLFQ13129 1914 aa23.59■■□□□ 1.37
COPE-204ENST00000593827 NEDD4P46934 1319 aa23.59■■□□□ 1.37
COPE-204ENST00000593827 SGSM2O43147 1006 aa23.58■■□□□ 1.37
COPE-204ENST00000593827 KDM4AO75164 1064 aa23.58■■□□□ 1.37
COPE-204ENST00000593827 TKFCQ3LXA3 575 aa23.58■■□□□ 1.37
COPE-204ENST00000593827 KCTD1Q719H9 257 aa23.58■■□□□ 1.37
COPE-204ENST00000593827 RAVER2Q9HCJ3 691 aaKnown RBP23.58■■□□□ 1.37
COPE-204ENST00000593827 NRBP1Q9UHY1 535 aa23.58■■□□□ 1.37
COPE-204ENST00000593827 MTMR7Q9Y216 660 aa23.58■■□□□ 1.37
COPE-204ENST00000593827 PLXNB2O15031 1838 aa23.57■■□□□ 1.36
COPE-204ENST00000593827 COBLO75128 1261 aa23.57■■□□□ 1.36
COPE-204ENST00000593827 SLC4A3P48751 1232 aa23.57■■□□□ 1.36
COPE-204ENST00000593827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.57■■□□□ 1.36
COPE-204ENST00000593827 NECAB2Q7Z6G3 386 aa23.57■■□□□ 1.36
COPE-204ENST00000593827 MAML3Q96JK9 1138 aa23.57■■□□□ 1.36
COPE-204ENST00000593827 UBAC1Q9BSL1 405 aa23.57■■□□□ 1.36
COPE-204ENST00000593827 FLRT1Q9NZU1 646 aa23.57■■□□□ 1.36
COPE-204ENST00000593827 OGDHLQ9ULD0 1010 aa23.57■■□□□ 1.36
COPE-204ENST00000593827 MYH4Q9Y623 1939 aa23.57■■□□□ 1.36
COPE-204ENST00000593827 ZNF236Q9UL36 1845 aa23.56■■□□□ 1.36
COPE-204ENST00000593827 CNGA1P29973 690 aa23.56■■□□□ 1.36
COPE-204ENST00000593827 CYP2C19P33261 490 aa23.56■■□□□ 1.36
COPE-204ENST00000593827 GPATCH4Q5T3I0 446 aaKnown RBP23.56■■□□□ 1.36
COPE-204ENST00000593827 CASC1Q6TDU7 716 aa23.56■■□□□ 1.36
COPE-204ENST00000593827 UBE2Q1Q7Z7E8 422 aa23.56■■□□□ 1.36
COPE-204ENST00000593827 MSL3Q8N5Y2 521 aaKnown RBP23.56■■□□□ 1.36
COPE-204ENST00000593827 ZSCAN10Q96SZ4 725 aaPredicted RBP23.56■■□□□ 1.36
COPE-204ENST00000593827 KAT14Q9H8E8 782 aa23.56■■□□□ 1.36
COPE-204ENST00000593827 B4E1Z4 1266 aa23.55■■□□□ 1.36
COPE-204ENST00000593827 BMP2KLQ5H9B9 411 aa23.55■■□□□ 1.36
COPE-204ENST00000593827 BTNL9Q6UXG8 535 aa23.55■■□□□ 1.36
COPE-204ENST00000593827 ANKRD35Q8N283 1001 aa23.55■■□□□ 1.36
COPE-204ENST00000593827 DPF3Q92784 378 aa23.55■■□□□ 1.36
COPE-204ENST00000593827 ACAD9Q9H845 621 aa23.55■■□□□ 1.36
COPE-204ENST00000593827 PRR12Q9ULL5 1215 aa23.55■■□□□ 1.36
COPE-204ENST00000593827 CCND3P30281 292 aaPredicted RBP23.54■■□□□ 1.36
COPE-204ENST00000593827 ZNF792Q3KQV3 632 aa23.54■■□□□ 1.36
COPE-204ENST00000593827 ANKS1AQ92625 1134 aa23.54■■□□□ 1.36
COPE-204ENST00000593827 ZSWIM5Q9P217 1185 aa23.54■■□□□ 1.36
COPE-204ENST00000593827 DDX20Q9UHI6 824 aaKnown RBP23.54■■□□□ 1.36
COPE-204ENST00000593827 MKI67P46013 3256 aaKnown RBP23.53■■□□□ 1.36
COPE-204ENST00000593827 IGHA2P01877 340 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 PGK2P07205 417 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 PDHBP11177 359 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 CYBAP13498 195 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 SYDE2Q5VT97 1194 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 RALYLQ86SE5 291 aaKnown RBP23.53■■□□□ 1.36
COPE-204ENST00000593827 CHMP4CQ96CF2 233 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 ZKSCAN3Q9BRR0 538 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 IL25Q9H293 177 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 CNPY2Q9Y2B0 182 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 RIPK3Q9Y572 518 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 NR2E3Q9Y5X4 410 aa23.53■■□□□ 1.36
COPE-204ENST00000593827 ZNF543Q08ER8 600 aa23.52■■□□□ 1.36
COPE-204ENST00000593827 SART3Q15020 963 aaKnown RBP23.52■■□□□ 1.36
COPE-204ENST00000593827 ZNF467Q7Z7K2 595 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms