RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 IGSF22Q8N9C0 903 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 NELFBQ8WX92 580 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 CSRNP1Q96S65 589 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 MTA3Q9BTC8 594 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 SPDYE3A6NKU9 549 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 TTLL1O95922 423 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 AMPD3Q01432 767 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 GRM4Q14833 912 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 CCDC174Q6PII3 467 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 NEDD1Q8NHV4 660 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 DESI2Q9BSY9 194 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 OR52Z1P0C646 297 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 CUL4BQ13620 913 aa14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 ZNHIT6Q9NWK9 470 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-208ENST00000585799 GPR75-ASB3A0A0A6YYF3 556 aa14.02□□□□□ -0.16
SMARCA4-208ENST00000585799 SEPT2Q15019 361 aa14.02□□□□□ -0.16
SMARCA4-208ENST00000585799 JDP2Q8WYK2 163 aa14.02□□□□□ -0.16
SMARCA4-208ENST00000585799 PYM1Q9BRP8 204 aaKnown RBP14.02□□□□□ -0.16
SMARCA4-208ENST00000585799 PSTPIP2Q9H939 334 aa14.02□□□□□ -0.16
SMARCA4-208ENST00000585799 GDAQ9Y2T3 454 aa14.02□□□□□ -0.16
SMARCA4-208ENST00000585799 PCDHA1Q9Y5I3 950 aa14.02□□□□□ -0.16
SMARCA4-208ENST00000585799 PCDHAC2Q9Y5I4 1007 aa14.02□□□□□ -0.16
SMARCA4-208ENST00000585799 CHMP2AO43633 222 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 MYO1BO43795 1136 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 CFBP00751 764 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 PAK1Q13153 545 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 EZH2Q15910 746 aaKnown RBP14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 DEFB132Q7Z7B7 95 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 CPXCR1Q8N123 301 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 PRIMPOLQ96LW4 560 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 SIPA1L3O60292 1781 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 ZSCAN12O43309 604 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 CDC42EP5Q6NZY7 148 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 TMC4Q7Z404 712 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 BAG1Q99933 345 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 DEF6Q9H4E7 631 aa14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.02□□□□□ -0.173e-6■■■■■ 29.3
SMARCA4-208ENST00000585799 ZNF277Q9NRM2 450 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 CCP110O43303 1012 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 SRGNP10124 158 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 UBXN2AP68543 259 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 PRKG1Q13976 671 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 ABCB5Q2M3G0 1257 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 PDCL2Q8N4E4 241 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 WNT7AO00755 349 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 ZBTB7AO95365 584 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 TRIM21P19474 475 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 KIFC2Q96AC6 838 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP27XA6NNY8 438 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L15C9J2P7 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L13C9JLJ4 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L11C9JVI0 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L18D6R9N7 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L22D6RA61 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L17D6RBQ6 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L19D6RCP7 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L20D6RJB6 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 RPN1P04843 607 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 RCAN1P53805 252 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L24Q0WX57 530 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 RCSD1Q6JBY9 416 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 USP17L6PQ6QN14 398 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 SV2BQ7L1I2 683 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 GJA10Q969M2 543 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 SRRTQ9BXP5 876 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 TMEM60Q9H2L4 133 aa14.01□□□□□ -0.17
SMARCA4-208ENST00000585799 GH2P01242 217 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 PPP4CP60510 307 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 FMR1Q06787 632 aaKnown RBP eCLIP14□□□□□ -0.174e-8■■■■□ 19.7
SMARCA4-208ENST00000585799 PDE4CQ08493 712 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 CCDC40Q4G0X9 1142 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 FOXP4Q8IVH2 680 aaPredicted RBP14□□□□□ -0.17
SMARCA4-208ENST00000585799 SLC39A2Q9NP94 309 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 BCS1LQ9Y276 419 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 FAM205AQ6ZU69 1335 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 RBM43Q6ZSC3 357 aaKnown RBP14□□□□□ -0.17
SMARCA4-208ENST00000585799 CSGALNACT2Q8N6G5 542 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 HOMER2Q9NSB8 354 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 BAG6P46379 1132 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 DNA2P51530 1060 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 CACNB1Q02641 598 aaPredicted RBP14□□□□□ -0.17
SMARCA4-208ENST00000585799 PODNQ7Z5L7 613 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 POLD4Q9HCU8 107 aa14□□□□□ -0.17
SMARCA4-208ENST00000585799 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 KIF4BQ2VIQ3 1234 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 TEX35Q5T0J7 233 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 TCERG1LQ5VWI1 586 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 KIAA1328Q86T90 577 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 DDX4Q9NQI0 724 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 DOT1LQ8TEK3 1739 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 DYNC1I1O14576 645 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 PLCG1P19174 1290 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 TRAPPC10P48553 1259 aa13.99□□□□□ -0.17
SMARCA4-208ENST00000585799 PRR16Q569H4 304 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms