RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 MTMR7Q9Y216 660 aa12.23□□□□□ -0.45
UBR1-207ENST00000568782 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
UBR1-207ENST00000568782 TMEM232C9JQI7 657 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 MCCP23508 829 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 CCL14Q16627 93 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 OLFML2BQ68BL8 750 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 RCSD1Q6JBY9 416 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 POTEEQ6S8J3 1075 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 STAG1Q8WVM7 1258 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 SHISA4Q96DD7 197 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 GMCL1Q96IK5 515 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 TTC14Q96N46 770 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 DSCC1Q9BVC3 393 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 CRISPLD2Q9H0B8 497 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 CNNM2Q9H8M5 875 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 FBXO40Q9UH90 709 aa12.22□□□□□ -0.45
UBR1-207ENST00000568782 ZNF236Q9UL36 1845 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 RAD50Q92878 1312 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 FOXP2O15409 715 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 FGRP09769 529 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
UBR1-207ENST00000568782 OAZ1P54368 228 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 TRIM32Q13049 653 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 TRDNQ13061 729 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 MAP3K21Q5TCX8 1036 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 ANKRD35Q8N283 1001 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 NPLOC4Q8TAT6 608 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 DCAF4Q8WV16 495 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 KRT23Q9C075 422 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 INCENPQ9NQS7 918 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 TCP11L1Q9NUJ3 509 aa12.21□□□□□ -0.45
UBR1-207ENST00000568782 ZNF214Q9UL59 606 aaPredicted RBP12.21□□□□□ -0.45
UBR1-207ENST00000568782 ATP2A1O14983 1001 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 EVI5O60447 810 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 NMT2O60551 498 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 PLA2G6O60733 806 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 NEFLP07196 543 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 CYP2C19P33261 490 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 CHST13Q8NET6 341 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 PAWRQ96IZ0 340 aaKnown RBP12.2□□□□□ -0.46
UBR1-207ENST00000568782 SLC38A10Q9HBR0 1119 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 RAVER2Q9HCJ3 691 aaKnown RBP12.2□□□□□ -0.46
UBR1-207ENST00000568782 IL17RBQ9NRM6 502 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 PNMA2Q9UL42 364 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 OGDHLQ9ULD0 1010 aa12.2□□□□□ -0.46
UBR1-207ENST00000568782 DIS3Q9Y2L1 958 aaKnown RBP12.2□□□□□ -0.46
UBR1-207ENST00000568782 LAMA4Q16363 1823 aa12.19□□□□□ -0.46
UBR1-207ENST00000568782 CCND3P30281 292 aaPredicted RBP12.19□□□□□ -0.46
UBR1-207ENST00000568782 TKFCQ3LXA3 575 aa12.19□□□□□ -0.46
UBR1-207ENST00000568782 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
UBR1-207ENST00000568782 CENPQQ7L2Z9 268 aaPredicted RBP12.19□□□□□ -0.46
UBR1-207ENST00000568782 ARRDC4Q8NCT1 418 aa12.19□□□□□ -0.46
UBR1-207ENST00000568782 MAML3Q96JK9 1138 aa12.19□□□□□ -0.46
UBR1-207ENST00000568782 UBAC1Q9BSL1 405 aa12.19□□□□□ -0.46
UBR1-207ENST00000568782 C11orf49Q9H6J7 331 aa12.19□□□□□ -0.46
UBR1-207ENST00000568782 DDX20Q9UHI6 824 aaKnown RBP12.19□□□□□ -0.46
UBR1-207ENST00000568782 NRBP1Q9UHY1 535 aa12.19□□□□□ -0.46
UBR1-207ENST00000568782 CNPY2Q9Y2B0 182 aa12.19□□□□□ -0.46
UBR1-207ENST00000568782 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
UBR1-207ENST00000568782 COBLO75128 1261 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 PDE4AP27815 886 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 CASC1Q6TDU7 716 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 DGKHQ86XP1 1220 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 MSL3Q8N5Y2 521 aaKnown RBP12.18□□□□□ -0.46
UBR1-207ENST00000568782 REPS2Q8NFH8 660 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 ACAD9Q9H845 621 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 FLRT1Q9NZU1 646 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 BRCA2P51587 3418 aa12.18□□□□□ -0.46
UBR1-207ENST00000568782 MKI67P46013 3256 aaKnown RBP12.17□□□□□ -0.46
UBR1-207ENST00000568782 MYH6P13533 1939 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 FRMPD3Q5JV73 1810 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 ERICH2A1L162 156 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 SEPT4O43236 478 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 KDM4AO75164 1064 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
UBR1-207ENST00000568782 PGK2P07205 417 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 ALAS1P13196 640 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 GSPT1P15170 499 aaKnown RBP12.17□□□□□ -0.46
UBR1-207ENST00000568782 GPATCH4Q5T3I0 446 aaKnown RBP12.17□□□□□ -0.46
UBR1-207ENST00000568782 CCDC174Q6PII3 467 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 RALYLQ86SE5 291 aaKnown RBP12.17□□□□□ -0.46
UBR1-207ENST00000568782 TINF2Q9BSI4 451 aa12.17□□□□□ -0.46
UBR1-207ENST00000568782 PFASO15067 1338 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 B4E1Z4 1266 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 RARBP10826 455 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 CYBAP13498 195 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 CHMLP26374 656 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 SART3Q15020 963 aaKnown RBP12.16□□□□□ -0.46
UBR1-207ENST00000568782 ZNF792Q3KQV3 632 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 UBE2Q1Q7Z7E8 422 aa12.16□□□□□ -0.46
UBR1-207ENST00000568782 TBC1D10CQ8IV04 446 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms