RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 KRT25Q7Z3Z0 450 aa17.3■□□□□ 0.36
AP4E1-202ENST00000558439 GGA1Q9UJY5 639 aa17.3■□□□□ 0.36
AP4E1-202ENST00000558439 H7C1D1 291 aa17.3■□□□□ 0.36
AP4E1-202ENST00000558439 GTF2IP78347 998 aa17.3■□□□□ 0.36
AP4E1-202ENST00000558439 FOXP4Q8IVH2 680 aaPredicted RBP17.3■□□□□ 0.36
AP4E1-202ENST00000558439 PNMA6AP0CW24 399 aaPredicted RBP17.3■□□□□ 0.36
AP4E1-202ENST00000558439 C2CD5Q86YS7 1000 aa17.3■□□□□ 0.36
AP4E1-202ENST00000558439 TSPYL1Q9H0U9 437 aa17.3■□□□□ 0.36
AP4E1-202ENST00000558439 GOLGA6L10A6NI86 522 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 UBAP1LF5GYI3 381 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 BTDP43251 543 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 NCAPHQ15003 741 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 NTRK3Q16288 839 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 CALCRLQ16602 461 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 SRBD1Q8N5C6 995 aaKnown RBP17.29■□□□□ 0.36
AP4E1-202ENST00000558439 RABEP2Q9H5N1 569 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 ZCCHC17Q9NP64 241 aaKnown RBP17.29■□□□□ 0.36
AP4E1-202ENST00000558439 WTIPA6NIX2 430 aaPredicted RBP17.29■□□□□ 0.36
AP4E1-202ENST00000558439 TOB1P50616 345 aaPredicted RBP17.29■□□□□ 0.36
AP4E1-202ENST00000558439 ZFYVE27Q5T4F4 411 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 CDC23Q9UJX2 597 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 ZMYND10O75800 440 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 LONP1P36776 959 aaKnown RBP17.29■□□□□ 0.36
AP4E1-202ENST00000558439 TCP10Q12799 353 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 PCDHA4Q9UN74 947 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 OR52Z1P0C646 297 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 GYS2P54840 703 aa17.29■□□□□ 0.36
AP4E1-202ENST00000558439 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
AP4E1-202ENST00000558439 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
AP4E1-202ENST00000558439 RRAGAQ7L523 313 aa17.28■□□□□ 0.36
AP4E1-202ENST00000558439 TUBGCP2Q9BSJ2 902 aa17.28■□□□□ 0.36
AP4E1-202ENST00000558439 TBC1D9BQ66K14 1250 aa17.28■□□□□ 0.36
AP4E1-202ENST00000558439 CCDC51Q96ER9 411 aa17.28■□□□□ 0.36
AP4E1-202ENST00000558439 MAP3K14Q99558 947 aa17.28■□□□□ 0.36
AP4E1-202ENST00000558439 BRIP1Q9BX63 1249 aa17.28■□□□□ 0.36
AP4E1-202ENST00000558439 MYO6Q9UM54 1294 aa17.28■□□□□ 0.36
AP4E1-202ENST00000558439 SRGAP1Q7Z6B7 1085 aa17.28■□□□□ 0.36
AP4E1-202ENST00000558439 STAG2Q8N3U4 1231 aa17.28■□□□□ 0.36
AP4E1-202ENST00000558439 BCCIPQ9P287 314 aaKnown RBP eCLIP17.28■□□□□ 0.36
AP4E1-202ENST00000558439 CYP27A1Q02318 531 aa17.27■□□□□ 0.36
AP4E1-202ENST00000558439 RAPGEF1Q13905 1077 aa17.27■□□□□ 0.36
AP4E1-202ENST00000558439 IFT81Q8WYA0 676 aa17.27■□□□□ 0.36
AP4E1-202ENST00000558439 RABGGTAQ92696 567 aa17.27■□□□□ 0.36
AP4E1-202ENST00000558439 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
AP4E1-202ENST00000558439 PNPLA7Q6ZV29 1317 aa17.27■□□□□ 0.36
AP4E1-202ENST00000558439 ZNF658Q5TYW1 1059 aaPredicted RBP17.27■□□□□ 0.36
AP4E1-202ENST00000558439 NEK8Q86SG6 692 aa17.27■□□□□ 0.36
AP4E1-202ENST00000558439 SAR1BQ9Y6B6 198 aa17.27■□□□□ 0.36
AP4E1-202ENST00000558439 MFAP3LO75121 409 aa17.27■□□□□ 0.35
AP4E1-202ENST00000558439 ITPK1Q13572 414 aa17.27■□□□□ 0.35
AP4E1-202ENST00000558439 LONRF2Q1L5Z9 754 aa17.27■□□□□ 0.35
AP4E1-202ENST00000558439 HERC4Q5GLZ8 1057 aaPredicted RBP17.27■□□□□ 0.35
AP4E1-202ENST00000558439 RGS22Q8NE09 1264 aa17.27■□□□□ 0.35
AP4E1-202ENST00000558439 LRRC27Q9C0I9 530 aa17.27■□□□□ 0.35
AP4E1-202ENST00000558439 USP8P40818 1118 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 MAGEA1P43355 309 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 TRAPPC10P48553 1259 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 ADCY7P51828 1080 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 SH3RF3Q8TEJ3 882 aaPredicted RBP17.26■□□□□ 0.35
AP4E1-202ENST00000558439 NBPF3Q9H094 633 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 FAM107BQ9H098 131 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 PDE11AQ9HCR9 933 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 FAM217BQ9NTX9 383 aaPredicted RBP17.26■□□□□ 0.35
AP4E1-202ENST00000558439 HPSEQ9Y251 543 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 MST1RQ04912 1400 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 PCP11498 1178 aaKnown RBP17.26■□□□□ 0.35
AP4E1-202ENST00000558439 PRCPP42785 496 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 DNM2P50570 870 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 SCNN1DP51172 638 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 LRRC41Q15345 812 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 COA7Q96BR5 231 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 CAMTA2O94983 1202 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 MRPL12P52815 198 aaKnown RBP17.26■□□□□ 0.35
AP4E1-202ENST00000558439 NCAPH2Q6IBW4 605 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 ADGRA1Q86SQ6 560 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 SECISBP2LQ93073 1101 aaKnown RBP17.26■□□□□ 0.35
AP4E1-202ENST00000558439 PIGSQ96S52 555 aa17.26■□□□□ 0.35
AP4E1-202ENST00000558439 TC2NQ8N9U0 490 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 CUL5Q93034 780 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 PPP1R12BO60237 982 aaPredicted RBP17.25■□□□□ 0.35
AP4E1-202ENST00000558439 PTPROQ16827 1216 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 DCAF17Q5H9S7 520 aaPredicted RBP17.25■□□□□ 0.35
AP4E1-202ENST00000558439 CNOT6LQ96LI5 555 aaKnown RBP17.25■□□□□ 0.35
AP4E1-202ENST00000558439 SLC4A9Q96Q91 983 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 NWD1Q149M9 1564 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 TOM1O60784 492 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 ZSCAN20P17040 1043 aaPredicted RBP17.25■□□□□ 0.35
AP4E1-202ENST00000558439 PLCG1P19174 1290 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 KLRK1P26718 216 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 VPS36Q86VN1 386 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 LRRN4CLQ8ND94 238 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 TBCKQ8TEA7 893 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 PANX2Q96RD6 677 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 IFIH1Q9BYX4 1025 aaKnown RBP17.25■□□□□ 0.35
AP4E1-202ENST00000558439 NFAT5O94916 1531 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 TBCAO75347 108 aaKnown RBP17.25■□□□□ 0.35
AP4E1-202ENST00000558439 TERF2Q15554 542 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms