RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 KIAA1524Q8TCG1 905 aa21.43■■□□□ 1.02
LRP1-204ENST00000553277 BPIFA3Q9BQP9 254 aa21.43■■□□□ 1.02
LRP1-204ENST00000553277 ZNF341Q9BYN7 854 aa21.43■■□□□ 1.02
LRP1-204ENST00000553277 NAT10Q9H0A0 1025 aaKnown RBP21.43■■□□□ 1.02
LRP1-204ENST00000553277 TTC12Q9H892 705 aaPredicted RBP21.43■■□□□ 1.02
LRP1-204ENST00000553277 PPP6R2O75170 966 aa21.42■■□□□ 1.02
LRP1-204ENST00000553277 U2AF2P26368 475 aaKnown RBP eCLIP21.42■■□□□ 1.023e-6■■□□□ 14.3
LRP1-204ENST00000553277 ICA1Q05084 483 aa21.42■■□□□ 1.02
LRP1-204ENST00000553277 SLC39A14Q15043 492 aa21.42■■□□□ 1.02
LRP1-204ENST00000553277 TMTC3Q6ZXV5 915 aa21.42■■□□□ 1.02
LRP1-204ENST00000553277 CLEC10AQ8IUN9 316 aa21.42■■□□□ 1.02
LRP1-204ENST00000553277 CCDC144CPQ8IYA2 1237 aa21.42■■□□□ 1.02
LRP1-204ENST00000553277 TIGD1Q96MW7 591 aa21.42■■□□□ 1.02
LRP1-204ENST00000553277 MAD2L2Q9UI95 211 aa21.42■■□□□ 1.02
LRP1-204ENST00000553277 R3HCC1Q9Y3T6 440 aaKnown RBP21.42■■□□□ 1.02
LRP1-204ENST00000553277 CLIC4Q9Y696 253 aa21.42■■□□□ 1.02
LRP1-204ENST00000553277 FAM237AA0A1B0GTK4 181 aa21.41■■□□□ 1.02
LRP1-204ENST00000553277 GOLGA6L19H0YKK7 550 aa21.41■■□□□ 1.02
LRP1-204ENST00000553277 VEGFAP15692 232 aaPredicted RBP21.41■■□□□ 1.02
LRP1-204ENST00000553277 SMARCA1P28370 1054 aa21.41■■□□□ 1.02
LRP1-204ENST00000553277 GNAQP50148 359 aa21.41■■□□□ 1.02
LRP1-204ENST00000553277 KRT26Q7Z3Y9 468 aa21.41■■□□□ 1.02
LRP1-204ENST00000553277 JMYQ8N9B5 988 aa21.41■■□□□ 1.02
LRP1-204ENST00000553277 MRFAP1L1Q96HT8 127 aa21.41■■□□□ 1.02
LRP1-204ENST00000553277 PRIMPOLQ96LW4 560 aa21.41■■□□□ 1.02
LRP1-204ENST00000553277 FMNL1O95466 1100 aaPredicted RBP21.4■■□□□ 1.02
LRP1-204ENST00000553277 PDHBP11177 359 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 KRT40Q6A162 431 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 OTUD7BQ6GQQ9 843 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 GMCL1P1Q8NEA9 526 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 KLRG1Q96E93 195 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 LZTS2Q9BRK4 669 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 KIF28PB7ZC32 967 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 AXDND1Q5T1B0 1012 aaPredicted RBP21.4■■□□□ 1.02
LRP1-204ENST00000553277 PRAMEF18Q5VWM3 479 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 CEP57L1Q8IYX8 460 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 RNF26Q9BY78 433 aaPredicted RBP21.4■■□□□ 1.02
LRP1-204ENST00000553277 TRIM5Q9C035 493 aa21.4■■□□□ 1.02
LRP1-204ENST00000553277 ATAD5Q96QE3 1844 aa21.39■■□□□ 1.02
LRP1-204ENST00000553277 TRIM29Q14134 588 aa21.39■■□□□ 1.01
LRP1-204ENST00000553277 ZNF830Q96NB3 372 aaPredicted RBP21.39■■□□□ 1.01
LRP1-204ENST00000553277 KCNF1Q9H3M0 494 aa21.39■■□□□ 1.01
LRP1-204ENST00000553277 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.39■■□□□ 1.01
LRP1-204ENST00000553277 TMX2Q9Y320 296 aa21.39■■□□□ 1.01
LRP1-204ENST00000553277 SSRP1Q08945 709 aaKnown RBP21.38■■□□□ 1.01
LRP1-204ENST00000553277 ASPRV1Q53RT3 343 aa21.38■■□□□ 1.01
LRP1-204ENST00000553277 NOL9Q5SY16 702 aaKnown RBP21.38■■□□□ 1.01
LRP1-204ENST00000553277 SRBD1Q8N5C6 995 aaKnown RBP21.38■■□□□ 1.01
LRP1-204ENST00000553277 KIAA1468Q9P260 1216 aa21.38■■□□□ 1.01
LRP1-204ENST00000553277 A0A1W2PRG0 241 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 ADM5C9JUS6 153 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 PRPF3O43395 683 aaKnown RBP21.37■■□□□ 1.01
LRP1-204ENST00000553277 NEMFO60524 1076 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 PLEKHA8P1O95397 391 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 NDUFA8P51970 172 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 ELOA2Q8IYF1 753 aaPredicted RBP21.37■■□□□ 1.01
LRP1-204ENST00000553277 LRRC47Q8N1G4 583 aaKnown RBP21.37■■□□□ 1.01
LRP1-204ENST00000553277 STAG2Q8N3U4 1231 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 PHKBQ93100 1093 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 SDF4Q9BRK5 362 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 DOCK1Q14185 1865 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 USP17L5A8MUK1 530 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 DYNC1I1O14576 645 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 RRP9O43818 475 aaKnown RBP21.37■■□□□ 1.01
LRP1-204ENST00000553277 PPFIA3O75145 1194 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 USP2O75604 605 aaPredicted RBP21.37■■□□□ 1.01
LRP1-204ENST00000553277 PARP1P09874 1014 aaKnown RBP21.37■■□□□ 1.01
LRP1-204ENST00000553277 INPP5BP32019 993 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 ZNF543Q08ER8 600 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 GPATCH4Q5T3I0 446 aaKnown RBP21.37■■□□□ 1.01
LRP1-204ENST00000553277 C11orf57Q6ZUT1 292 aaPredicted RBP21.37■■□□□ 1.01
LRP1-204ENST00000553277 TRIM22Q8IYM9 498 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.37■■□□□ 1.01
LRP1-204ENST00000553277 GMCL1Q96IK5 515 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 SPZ1Q9BXG8 430 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 ARHGEF10LQ9HCE6 1279 aa21.37■■□□□ 1.01
LRP1-204ENST00000553277 PAPPA2Q9BXP8 1791 aa21.36■■□□□ 1.01
LRP1-204ENST00000553277 BAZ2BQ9UIF8 2168 aaKnown RBP21.36■■□□□ 1.01
LRP1-204ENST00000553277 PTPAQ15257 358 aa21.36■■□□□ 1.01
LRP1-204ENST00000553277 SLC35G1Q2M3R5 365 aa21.36■■□□□ 1.01
LRP1-204ENST00000553277 SCYL3Q8IZE3 742 aa21.36■■□□□ 1.01
LRP1-204ENST00000553277 DCAF4Q8WV16 495 aa21.36■■□□□ 1.01
LRP1-204ENST00000553277 MORC2Q9Y6X9 1032 aaPredicted RBP21.36■■□□□ 1.01
LRP1-204ENST00000553277 CNTNAP5Q8WYK1 1306 aa21.36■■□□□ 1.01
LRP1-204ENST00000553277 A0A1B0GVL5 298 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 BECN2A8MW95 431 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 KLRF2D3W0D1 207 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 F5H6K3 240 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 DEXIO95424 95 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 KLRC3Q07444 240 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 EAPPQ56P03 285 aaPredicted RBP21.35■■□□□ 1.01
LRP1-204ENST00000553277 USP17L2Q6R6M4 530 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 DHX40Q8IX18 779 aaKnown RBP21.35■■□□□ 1.01
LRP1-204ENST00000553277 SPC24Q8NBT2 197 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 CDCA5Q96FF9 252 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 WRNIP1Q96S55 665 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 RRAGCQ9HB90 399 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 HPSEQ9Y251 543 aa21.35■■□□□ 1.01
LRP1-204ENST00000553277 ZNF202O95125 648 aa21.34■■□□□ 1.01
LRP1-204ENST00000553277 PKN1Q16512 942 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms