RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 GRB14Q14449 540 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 KCTD2Q14681 263 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 CCDC178Q5BJE1 867 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 MFSD14CQ5VZR4 134 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 RCSD1Q6JBY9 416 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 KIAA1211Q6ZU35 1233 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 FAM160B2Q86V87 743 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 RIOX2Q8IUF8 465 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 TBC1D10CQ8IV04 446 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 ABRAQ8N0Z2 381 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 U2AF1L4Q8WU68 220 aaKnown RBP7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 CHURC1Q8WUH1 139 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 TRIB2Q92519 343 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 CHMP4CQ96CF2 233 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 TTC14Q96N46 770 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 DEFB118Q96PH6 123 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 MMP19Q99542 508 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 TEX13BQ9BXU2 312 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 KRT23Q9C075 422 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 CNNM2Q9H8M5 875 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 TCP11L1Q9NUJ3 509 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 MTMR7Q9Y216 660 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 TACC3Q9Y6A5 838 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 SMCHD1A6NHR9 2005 aa7.56□□□□□ -1.2
TMEM106C-213ENST00000550146 LAMA4Q16363 1823 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 KDM4AO75164 1064 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 CENPBP07199 599 aaPredicted RBP7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 HOXC6P09630 235 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 ADORA2AP29274 412 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 TRIM32Q13049 653 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 TRDNQ13061 729 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 CCL14Q16627 93 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 CCDC96Q2M329 555 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 SNRNP48Q6IEG0 339 aaKnown RBP7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 KCTD1Q719H9 257 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 IQCA1Q86XH1 822 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 CPXCR1Q8N123 301 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 SP7Q8TDD2 431 aaPredicted RBP7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 DCAF4Q8WV16 495 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 TMEM47Q9BQJ4 181 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 NBPF3Q9H094 633 aa7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 PAK6Q9NQU5 681 aaPredicted RBP7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 ZNF214Q9UL59 606 aaPredicted RBP7.55□□□□□ -1.2
TMEM106C-213ENST00000550146 NEDD4P46934 1319 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 CENPFP49454 3210 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 PLXNA1Q9UIW2 1896 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 B4E1Z4 1266 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 ATP2A1O14983 1001 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 SGSM2O43147 1006 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 PLA2G6O60733 806 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 CNGA1P29973 690 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 NOVP48745 357 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 OAZ1P54368 228 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 CACNB2Q08289 660 aaPredicted RBP7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 MAP3K21Q5TCX8 1036 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 CASC1Q6TDU7 716 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 DGKHQ86XP1 1220 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 REPS2Q8NFH8 660 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 DDX11Q96FC9 970 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 ZKSCAN3Q9BRR0 538 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 UBAC1Q9BSL1 405 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 KAT14Q9H8E8 782 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 SLC38A10Q9HBR0 1119 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 RAVER2Q9HCJ3 691 aaKnown RBP7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 FBXO40Q9UH90 709 aa7.54□□□□□ -1.2
TMEM106C-213ENST00000550146 FRMPD3Q5JV73 1810 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 ZNF236Q9UL36 1845 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 FARP2O94887 1054 aaPredicted RBP7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 PGK2P07205 417 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 CCND3P30281 292 aaPredicted RBP7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 CYP2C19P33261 490 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 PTH1RQ03431 593 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 BMP2KLQ5H9B9 411 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 OLFML2BQ68BL8 750 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 CCDC174Q6PII3 467 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 RALYLQ86SE5 291 aaKnown RBP7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 ANKRD35Q8N283 1001 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 ANKLE1Q8NAG6 615 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 CHST13Q8NET6 341 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 SHISA4Q96DD7 197 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 MAML3Q96JK9 1138 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 ZSCAN10Q96SZ4 725 aaPredicted RBP7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 HTATIP2Q9BUP3 242 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 CRISPLD2Q9H0B8 497 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 IL25Q9H293 177 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 GPCPD1Q9NPB8 672 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 FLRT1Q9NZU1 646 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 ZSWIM5Q9P217 1185 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 PRR12Q9ULL5 1215 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 RIPK3Q9Y572 518 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 MCM3APO60318 1980 aa7.53□□□□□ -1.2
TMEM106C-213ENST00000550146 FRMPD2Q68DX3 1309 aaPredicted RBP7.52□□□□□ -1.2
TMEM106C-213ENST00000550146 ERICH2A1L162 156 aa7.52□□□□□ -1.21
TMEM106C-213ENST00000550146 MSCO60682 206 aa7.52□□□□□ -1.21
TMEM106C-213ENST00000550146 COBLO75128 1261 aa7.52□□□□□ -1.21
TMEM106C-213ENST00000550146 CYP21A2P08686 494 aa7.52□□□□□ -1.21
TMEM106C-213ENST00000550146 ALAS1P13196 640 aa7.52□□□□□ -1.21
TMEM106C-213ENST00000550146 SLC16A2P36021 539 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms