RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 HMGCRP04035 888 aa25.13■■□□□ 1.61
PKP3-211ENST00000534401 INHAP05111 366 aa25.13■■□□□ 1.61
PKP3-211ENST00000534401 CYP2B6P20813 491 aa25.13■■□□□ 1.61
PKP3-211ENST00000534401 STAT2P52630 851 aa25.13■■□□□ 1.61
PKP3-211ENST00000534401 OAZ1P54368 228 aa25.13■■□□□ 1.61
PKP3-211ENST00000534401 MLLT1Q03111 559 aaPredicted RBP25.13■■□□□ 1.61
PKP3-211ENST00000534401 IQCA1Q86XH1 822 aa25.13■■□□□ 1.61
PKP3-211ENST00000534401 TRIB2Q92519 343 aa25.13■■□□□ 1.61
PKP3-211ENST00000534401 ZSCAN10Q96SZ4 725 aaPredicted RBP25.13■■□□□ 1.61
PKP3-211ENST00000534401 APBA2Q99767 749 aa25.13■■□□□ 1.61
PKP3-211ENST00000534401 TMEM106CQ9BVX2 250 aa25.13■■□□□ 1.61
PKP3-211ENST00000534401 BRCA2P51587 3418 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 CDC45O75419 566 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 PDHBP11177 359 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 CCL5P13501 91 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 NECTIN1Q15223 517 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 SEC23AQ15436 765 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 KIAA1211Q6ZU35 1233 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 STOX1Q6ZVD7 989 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 RASGRP2Q7LDG7 609 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 ENAHQ8N8S7 591 aaPredicted RBP25.12■■□□□ 1.61
PKP3-211ENST00000534401 ZKSCAN3Q9BRR0 538 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 TEX13BQ9BXU2 312 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 IVNS1ABPQ9Y6Y0 642 aa25.12■■□□□ 1.61
PKP3-211ENST00000534401 E7EWF7 191 aa25.11■■□□□ 1.61
PKP3-211ENST00000534401 ZBED4O75132 1171 aa25.11■■□□□ 1.61
PKP3-211ENST00000534401 GJB1P08034 283 aa25.11■■□□□ 1.61
PKP3-211ENST00000534401 PLS1Q14651 629 aa25.11■■□□□ 1.61
PKP3-211ENST00000534401 KCTD1Q719H9 257 aa25.11■■□□□ 1.61
PKP3-211ENST00000534401 CYB5R4Q7L1T6 521 aa25.11■■□□□ 1.61
PKP3-211ENST00000534401 KIFC2Q96AC6 838 aa25.11■■□□□ 1.61
PKP3-211ENST00000534401 SAMD1Q6SPF0 538 aaPredicted RBP25.1■■□□□ 1.61
PKP3-211ENST00000534401 UNC93B1Q9H1C4 597 aa25.1■■□□□ 1.61
PKP3-211ENST00000534401 PAK6Q9NQU5 681 aaPredicted RBP25.1■■□□□ 1.61
PKP3-211ENST00000534401 BIN2Q9UBW5 565 aaPredicted RBP25.1■■□□□ 1.61
PKP3-211ENST00000534401 RIPK3Q9Y572 518 aa25.1■■□□□ 1.61
PKP3-211ENST00000534401 ZNF536O15090 1300 aa25.1■■□□□ 1.61
PKP3-211ENST00000534401 SMCHD1A6NHR9 2005 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 COBLO75128 1261 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 CAPN2P17655 700 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 ADORA2AP29274 412 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 ZNF543Q08ER8 600 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 CCL14Q16627 93 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 WDR78Q5VTH9 848 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 NCAPG2Q86XI2 1143 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 NPLOC4Q8TAT6 608 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 PRR12Q9ULL5 1215 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 TNKSO95271 1327 aa25.09■■□□□ 1.61
PKP3-211ENST00000534401 EN2P19622 333 aaPredicted RBP25.08■■□□□ 1.61
PKP3-211ENST00000534401 TRIM32Q13049 653 aa25.08■■□□□ 1.61
PKP3-211ENST00000534401 CWC22Q9HCG8 908 aaKnown RBP25.08■■□□□ 1.61
PKP3-211ENST00000534401 FLRT1Q9NZU1 646 aa25.08■■□□□ 1.61
PKP3-211ENST00000534401 FCER1AP12319 257 aa25.07■■□□□ 1.6
PKP3-211ENST00000534401 GJA8P48165 433 aa25.07■■□□□ 1.6
PKP3-211ENST00000534401 TRDNQ13061 729 aa25.07■■□□□ 1.6
PKP3-211ENST00000534401 OLFML2BQ68BL8 750 aa25.07■■□□□ 1.6
PKP3-211ENST00000534401 SNRNP48Q6IEG0 339 aaKnown RBP25.07■■□□□ 1.6
PKP3-211ENST00000534401 TTBK2Q6IQ55 1244 aa25.07■■□□□ 1.6
PKP3-211ENST00000534401 MB21D2Q8IYB1 491 aaPredicted RBP25.07■■□□□ 1.6
PKP3-211ENST00000534401 PNMA1Q8ND90 353 aa25.07■■□□□ 1.6
PKP3-211ENST00000534401 NCOA7Q8NI08 942 aa25.07■■□□□ 1.6
PKP3-211ENST00000534401 RNF208Q9H0X6 261 aa25.07■■□□□ 1.6
PKP3-211ENST00000534401 RAVER2Q9HCJ3 691 aaKnown RBP25.07■■□□□ 1.6
PKP3-211ENST00000534401 RPTORQ8N122 1335 aa25.07■■□□□ 1.6
PKP3-211ENST00000534401 TNRC18O15417 2968 aaPredicted RBP25.06■■□□□ 1.6
PKP3-211ENST00000534401 PDE4DIPQ5VU43 2346 aa25.06■■□□□ 1.6
PKP3-211ENST00000534401 SLC27A2O14975 620 aa25.06■■□□□ 1.6
PKP3-211ENST00000534401 ZKSCAN1P17029 563 aaPredicted RBP25.06■■□□□ 1.6
PKP3-211ENST00000534401 GPATCH4Q5T3I0 446 aaKnown RBP25.06■■□□□ 1.6
PKP3-211ENST00000534401 SHISA4Q96DD7 197 aa25.06■■□□□ 1.6
PKP3-211ENST00000534401 MTA3Q9BTC8 594 aa25.06■■□□□ 1.6
PKP3-211ENST00000534401 RANBP17Q9H2T7 1088 aaKnown RBP25.06■■□□□ 1.6
PKP3-211ENST00000534401 DIS3Q9Y2L1 958 aaKnown RBP25.06■■□□□ 1.6
PKP3-211ENST00000534401 PLXNA1Q9UIW2 1896 aa25.06■■□□□ 1.6
PKP3-211ENST00000534401 DNAJC25-GNG10A0A024R161 153 aa25.05■■□□□ 1.6
PKP3-211ENST00000534401 ANTXR2P58335 489 aa25.05■■□□□ 1.6
PKP3-211ENST00000534401 CACNB2Q08289 660 aaPredicted RBP25.05■■□□□ 1.6
PKP3-211ENST00000534401 CREB3L3Q68CJ9 461 aa25.05■■□□□ 1.6
PKP3-211ENST00000534401 CASC1Q6TDU7 716 aa25.05■■□□□ 1.6
PKP3-211ENST00000534401 CPXCR1Q8N123 301 aa25.05■■□□□ 1.6
PKP3-211ENST00000534401 CHST13Q8NET6 341 aa25.05■■□□□ 1.6
PKP3-211ENST00000534401 UBAC1Q9BSL1 405 aa25.05■■□□□ 1.6
PKP3-211ENST00000534401 CRISPLD2Q9H0B8 497 aa25.05■■□□□ 1.6
PKP3-211ENST00000534401 ANO2Q9NQ90 1003 aa25.05■■□□□ 1.6
PKP3-211ENST00000534401 SLC34A2O95436 690 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 SGPL1O95470 568 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 MYCP01106 439 aaPredicted RBP25.04■■□□□ 1.6
PKP3-211ENST00000534401 CCDC96Q2M329 555 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 ZNF792Q3KQV3 632 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 TKFCQ3LXA3 575 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 TSGA10IPQ3SY00 556 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 SYDE2Q5VT97 1194 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 DPP9Q86TI2 863 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 MMP19Q99542 508 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.04■■□□□ 1.64e-9■■■□□ 14.6
PKP3-211ENST00000534401 KAT14Q9H8E8 782 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 FBXO40Q9UH90 709 aa25.04■■□□□ 1.6
PKP3-211ENST00000534401 UBE2Q1Q7Z7E8 422 aa25.03■■□□□ 1.6
PKP3-211ENST00000534401 IGDCC4Q8TDY8 1250 aa25.03■■□□□ 1.6
PKP3-211ENST00000534401 U2AF1L4Q8WU68 220 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms