RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 STAT2P52630 851 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 MTFR1Q15390 333 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 OLFML2BQ68BL8 750 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 IQCA1Q86XH1 822 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 LRRC47Q8N1G4 583 aaKnown RBP11.6□□□□□ -0.55
NUP98-220ENST00000533346 TRIB2Q92519 343 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 MTA3Q9BTC8 594 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 TEX13BQ9BXU2 312 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 ZSWIM5Q9P217 1185 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 IVNS1ABPQ9Y6Y0 642 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 NEDD4P46934 1319 aa11.6□□□□□ -0.55
NUP98-220ENST00000533346 ZBED4O75132 1171 aa11.59□□□□□ -0.55
NUP98-220ENST00000533346 ELNP15502 786 aa11.59□□□□□ -0.55
NUP98-220ENST00000533346 CYP2B6P20813 491 aa11.59□□□□□ -0.55
NUP98-220ENST00000533346 SLC1A4P43007 532 aa11.59□□□□□ -0.55
NUP98-220ENST00000533346 PTH1RQ03431 593 aa11.59□□□□□ -0.55
NUP98-220ENST00000533346 UBE2Q1Q7Z7E8 422 aa11.59□□□□□ -0.55
NUP98-220ENST00000533346 NUP88Q99567 741 aaPredicted RBP11.59□□□□□ -0.55
NUP98-220ENST00000533346 MAF1Q9H063 256 aa11.59□□□□□ -0.55
NUP98-220ENST00000533346 SLC5A4Q9NY91 659 aa11.59□□□□□ -0.55
NUP98-220ENST00000533346 FRMPD3Q5JV73 1810 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 TMEM232C9JQI7 657 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 KDM4AO75164 1064 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 ECM2O94769 699 aaPredicted RBP11.58□□□□□ -0.56
NUP98-220ENST00000533346 NEFLP07196 543 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 PDHBP11177 359 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 FCER1AP12319 257 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 MCCP23508 829 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 TKFCQ3LXA3 575 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
NUP98-220ENST00000533346 MSL3Q8N5Y2 521 aaKnown RBP11.58□□□□□ -0.56
NUP98-220ENST00000533346 ANKLE1Q8NAG6 615 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 CHST13Q8NET6 341 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 ZSCAN10Q96SZ4 725 aaPredicted RBP11.58□□□□□ -0.56
NUP98-220ENST00000533346 ESYT1Q9BSJ8 1104 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 LSG1Q9H089 658 aaKnown RBP11.58□□□□□ -0.56
NUP98-220ENST00000533346 RNF208Q9H0X6 261 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 UNC93B1Q9H1C4 597 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 HMX1Q9NP08 348 aaPredicted RBP11.58□□□□□ -0.56
NUP98-220ENST00000533346 TOMM22Q9NS69 142 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 NRBP1Q9UHY1 535 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 PNMA2Q9UL42 364 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 ZNF536O15090 1300 aa11.58□□□□□ -0.56
NUP98-220ENST00000533346 DNAJC25-GNG10A0A024R161 153 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 B4E1Z4 1266 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 COBLO75128 1261 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 CENPBP07199 599 aaPredicted RBP11.57□□□□□ -0.56
NUP98-220ENST00000533346 ZKSCAN1P17029 563 aaPredicted RBP11.57□□□□□ -0.56
NUP98-220ENST00000533346 EN2P19622 333 aaPredicted RBP11.57□□□□□ -0.56
NUP98-220ENST00000533346 ADORA2AP29274 412 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 SEC23AQ15436 765 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 ZNF792Q3KQV3 632 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 GPATCH4Q5T3I0 446 aaKnown RBP11.57□□□□□ -0.56
NUP98-220ENST00000533346 NCAPG2Q86XI2 1143 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 NPLOC4Q8TAT6 608 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 U2AF1L4Q8WU68 220 aaKnown RBP11.57□□□□□ -0.56
NUP98-220ENST00000533346 SHISA4Q96DD7 197 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.57□□□□□ -0.56
NUP98-220ENST00000533346 RANBP17Q9H2T7 1088 aaKnown RBP11.57□□□□□ -0.56
NUP98-220ENST00000533346 BIN2Q9UBW5 565 aaPredicted RBP11.57□□□□□ -0.56
NUP98-220ENST00000533346 FBXO40Q9UH90 709 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
NUP98-220ENST00000533346 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 EPB41L2O43491 1005 aaKnown RBP11.56□□□□□ -0.56
NUP98-220ENST00000533346 RAD21O60216 631 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 CACNB2Q08289 660 aaPredicted RBP11.56□□□□□ -0.56
NUP98-220ENST00000533346 ZNF543Q08ER8 600 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 TRDNQ13061 729 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 PLS1Q14651 629 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 MAMDC4Q6UXC1 1216 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
NUP98-220ENST00000533346 DPP9Q86TI2 863 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 ENAHQ8N8S7 591 aaPredicted RBP11.56□□□□□ -0.56
NUP98-220ENST00000533346 NCOA7Q8NI08 942 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 KIFC2Q96AC6 838 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 MAML3Q96JK9 1138 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 CWC22Q9HCG8 908 aaKnown RBP11.56□□□□□ -0.56
NUP98-220ENST00000533346 PPP4R2Q9NY27 417 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 FLRT1Q9NZU1 646 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 OGDHLQ9ULD0 1010 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 RIPK3Q9Y572 518 aa11.56□□□□□ -0.56
NUP98-220ENST00000533346 E7EWF7 191 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 MSCO60682 206 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
NUP98-220ENST00000533346 TRIM32Q13049 653 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 KCTD2Q14681 263 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 CCL14Q16627 93 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 MFSD14CQ5VZR4 134 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 LHX8Q68G74 356 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 SNRNP48Q6IEG0 339 aaKnown RBP11.55□□□□□ -0.56
NUP98-220ENST00000533346 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 KCTD1Q719H9 257 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 PNMA1Q8ND90 353 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 MMP19Q99542 508 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 RBM8AQ9Y5S9 174 aaKnown RBP11.55□□□□□ -0.56
NUP98-220ENST00000533346 SZT2Q5T011 3432 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 TNKSO95271 1327 aa11.55□□□□□ -0.56
NUP98-220ENST00000533346 WDR19Q8NEZ3 1342 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms