RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 SEL1L2Q5TEA6 688 aa9.67□□□□□ -0.86
CTNND1-232ENST00000532649 CEP128Q6ZU80 1094 aa9.67□□□□□ -0.86
CTNND1-232ENST00000532649 ZNF589Q86UQ0 364 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-232ENST00000532649 NOSTRINQ8IVI9 506 aa9.67□□□□□ -0.86
CTNND1-232ENST00000532649 LSG1Q9H089 658 aaKnown RBP9.67□□□□□ -0.86
CTNND1-232ENST00000532649 PIM2Q9P1W9 311 aa9.67□□□□□ -0.86
CTNND1-232ENST00000532649 CASQ2O14958 399 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-232ENST00000532649 PRKAB2O43741 272 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 SETDB1Q15047 1291 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 MYSM1Q5VVJ2 828 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 TBC1D9BQ66K14 1250 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 NT5C3AQ9H0P0 336 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 BLZF1Q9H2G9 400 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 ITIH3Q06033 890 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 KARSQ15046 597 aaKnown RBP9.66□□□□□ -0.86
CTNND1-232ENST00000532649 MCTP2Q6DN12 878 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 OTUD6AQ7L8S5 288 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 CNGA4Q8IV77 575 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 FMNL3Q8IVF7 1028 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 PSPC1Q8WXF1 523 aaKnown RBP9.66□□□□□ -0.86
CTNND1-232ENST00000532649 COA1Q9GZY4 146 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 STIM2Q9P246 746 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 ZBTB7AO95365 584 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 CYP19A1P11511 503 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-232ENST00000532649 MNAT1P51948 309 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 UAP1Q16222 522 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-232ENST00000532649 FAM47CQ5HY64 1035 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 MAP4K1Q92918 833 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 CSRNP2Q9H175 543 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 MTRF1LQ9UGC7 380 aaKnown RBP9.66□□□□□ -0.86
CTNND1-232ENST00000532649 SERPINB13Q9UIV8 391 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 KDM3AQ9Y4C1 1321 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 TTLL1O95922 423 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 ERCC3P19447 782 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 GTF2F1P35269 517 aaKnown RBP eCLIP9.66□□□□□ -0.865e-6■■■□□ 17.8
CTNND1-232ENST00000532649 TECP42680 631 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 RASGRF1Q13972 1273 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 ARHGEF1Q92888 912 aaKnown RBP9.66□□□□□ -0.86
CTNND1-232ENST00000532649 KCNK9Q9NPC2 374 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 LZTFL1Q9NQ48 299 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 PAXBP1Q9Y5B6 917 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 PCDHA1Q9Y5I3 950 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 LAMC1P11047 1609 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 LMTK2Q8IWU2 1503 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 CTAGE15A4D2H0 777 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 EXOC3O60645 756 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 CTAGE8P0CG41 777 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 MECOMQ03112 1051 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 POLA2Q14181 598 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 NEK8Q86SG6 692 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 CTAGE6Q86UF2 777 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 CTAGE4Q8IX94 777 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 METTL13Q8N6R0 699 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 PUS7LQ9H0K6 701 aaKnown RBP9.66□□□□□ -0.86
CTNND1-232ENST00000532649 TRPC6Q9Y210 931 aa9.66□□□□□ -0.86
CTNND1-232ENST00000532649 CTAGE9A4FU28 777 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 MTUS1Q9ULD2 1270 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTNND1-232ENST00000532649 AKR1B15C9JRZ8 316 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-232ENST00000532649 ADRA2BP18089 450 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 KCTD1Q719H9 257 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 MLKLQ8NB16 471 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 PCDHA12Q9UN75 941 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 CARMIL3Q8ND23 1372 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-232ENST00000532649 SASH1O94885 1247 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 PDIA3P30101 505 aaKnown RBP9.65□□□□□ -0.86
CTNND1-232ENST00000532649 OSBPL3Q9H4L5 887 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 PPANQ9NQ55 473 aaKnown RBP9.65□□□□□ -0.86
CTNND1-232ENST00000532649 DDX25Q9UHL0 483 aaKnown RBP9.65□□□□□ -0.86
CTNND1-232ENST00000532649 PNMA2Q9UL42 364 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 CD2APQ9Y5K6 639 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 SETBP1Q9Y6X0 1596 aa9.65□□□□□ -0.86
CTNND1-232ENST00000532649 GPATCH4Q5T3I0 446 aaKnown RBP9.65□□□□□ -0.87
CTNND1-232ENST00000532649 IGSF22Q8N9C0 903 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 GADD45BO75293 160 aaPredicted RBP9.65□□□□□ -0.87
CTNND1-232ENST00000532649 IGKV5-2P06315 115 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 CYP21A2P08686 494 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 USP17L8P0C7I0 530 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 HSPA1LP34931 641 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 KRT9P35527 623 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 TXNRD1Q16881 649 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 ASPRV1Q53RT3 343 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 CCDC121Q6ZUS5 278 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 DHX36Q9H2U1 1008 aaKnown RBP9.65□□□□□ -0.87
CTNND1-232ENST00000532649 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.65□□□□□ -0.87
CTNND1-232ENST00000532649 PTCH1Q13635 1447 aa9.65□□□□□ -0.87
CTNND1-232ENST00000532649 USP31Q70CQ4 1352 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 ATP5DP30049 168 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 USP14P54578 494 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-232ENST00000532649 NOLC1Q14978 699 aaKnown RBP eCLIP9.64□□□□□ -0.87
CTNND1-232ENST00000532649 ADCK5Q3MIX3 580 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 FAM102BQ5T8I3 360 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 GALNT17Q6IS24 598 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 MIGA2Q7L4E1 593 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 ARMC9Q7Z3E5 817 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 PLA2G4DQ86XP0 818 aa9.64□□□□□ -0.87
CTNND1-232ENST00000532649 SLFN12Q8IYM2 578 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms