RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 SLC38A10Q9HBR0 1119 aa24.62■■□□□ 1.53
TRAPPC9-215ENST00000524162 PAK6Q9NQU5 681 aaPredicted RBP24.62■■□□□ 1.53
TRAPPC9-215ENST00000524162 NEDD4P46934 1319 aa24.61■■□□□ 1.53
TRAPPC9-215ENST00000524162 CYP2B6P20813 491 aa24.61■■□□□ 1.53
TRAPPC9-215ENST00000524162 GJA8P48165 433 aa24.61■■□□□ 1.53
TRAPPC9-215ENST00000524162 TRIB2Q92519 343 aa24.61■■□□□ 1.53
TRAPPC9-215ENST00000524162 TMEM47Q9BQJ4 181 aa24.61■■□□□ 1.53
TRAPPC9-215ENST00000524162 RNF208Q9H0X6 261 aa24.61■■□□□ 1.53
TRAPPC9-215ENST00000524162 RPTORQ8N122 1335 aa24.61■■□□□ 1.53
TRAPPC9-215ENST00000524162 ZBED4O75132 1171 aa24.6■■□□□ 1.53
TRAPPC9-215ENST00000524162 IGHA2P01877 340 aa24.6■■□□□ 1.53
TRAPPC9-215ENST00000524162 PLS1Q14651 629 aa24.6■■□□□ 1.53
TRAPPC9-215ENST00000524162 SLC5A4Q9NY91 659 aa24.6■■□□□ 1.53
TRAPPC9-215ENST00000524162 FCER1AP12319 257 aa24.59■■□□□ 1.53
TRAPPC9-215ENST00000524162 ZKSCAN1P17029 563 aaPredicted RBP24.59■■□□□ 1.53
TRAPPC9-215ENST00000524162 MCCP23508 829 aa24.59■■□□□ 1.53
TRAPPC9-215ENST00000524162 WDR78Q5VTH9 848 aa24.59■■□□□ 1.53
TRAPPC9-215ENST00000524162 PLXNA1Q9UIW2 1896 aa24.59■■□□□ 1.53
TRAPPC9-215ENST00000524162 TMEM232C9JQI7 657 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 KDM4AO75164 1064 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 SNHG28P0DPA3 235 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 ADORA2AP29274 412 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 PTH1RQ03431 593 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 OLFML2BQ68BL8 750 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 BTNL9Q6UXG8 535 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 NCAPG2Q86XI2 1143 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 UNC93B1Q9H1C4 597 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 HMX1Q9NP08 348 aaPredicted RBP24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 ZSWIM5Q9P217 1185 aa24.58■■□□□ 1.53
TRAPPC9-215ENST00000524162 EN2P19622 333 aaPredicted RBP24.57■■□□□ 1.52
TRAPPC9-215ENST00000524162 KIAA1211Q6ZU35 1233 aa24.57■■□□□ 1.52
TRAPPC9-215ENST00000524162 KIFC2Q96AC6 838 aa24.57■■□□□ 1.52
TRAPPC9-215ENST00000524162 ESYT1Q9BSJ8 1104 aa24.57■■□□□ 1.52
TRAPPC9-215ENST00000524162 DIS3Q9Y2L1 958 aaKnown RBP24.57■■□□□ 1.52
TRAPPC9-215ENST00000524162 SGPL1O95470 568 aa24.56■■□□□ 1.52
TRAPPC9-215ENST00000524162 CYP21A2P08686 494 aa24.56■■□□□ 1.52
TRAPPC9-215ENST00000524162 TRDNQ13061 729 aa24.56■■□□□ 1.52
TRAPPC9-215ENST00000524162 DPP9Q86TI2 863 aa24.56■■□□□ 1.52
TRAPPC9-215ENST00000524162 ZSCAN10Q96SZ4 725 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC9-215ENST00000524162 CRISPLD2Q9H0B8 497 aa24.56■■□□□ 1.52
TRAPPC9-215ENST00000524162 FBXO40Q9UH90 709 aa24.56■■□□□ 1.52
TRAPPC9-215ENST00000524162 B4E1Z4 1266 aa24.55■■□□□ 1.52
TRAPPC9-215ENST00000524162 PDHBP11177 359 aa24.55■■□□□ 1.52
TRAPPC9-215ENST00000524162 MFSD14CQ5VZR4 134 aa24.55■■□□□ 1.52
TRAPPC9-215ENST00000524162 CHST13Q8NET6 341 aa24.55■■□□□ 1.52
TRAPPC9-215ENST00000524162 U2AF1L4Q8WU68 220 aaKnown RBP24.55■■□□□ 1.52
TRAPPC9-215ENST00000524162 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.55■■□□□ 1.52
TRAPPC9-215ENST00000524162 PNMA2Q9UL42 364 aa24.55■■□□□ 1.52
TRAPPC9-215ENST00000524162 CTDP1Q9Y5B0 961 aaPredicted RBP24.55■■□□□ 1.52
TRAPPC9-215ENST00000524162 PRKAR2AP13861 404 aaKnown RBP24.54■■□□□ 1.52
TRAPPC9-215ENST00000524162 KCTD2Q14681 263 aa24.54■■□□□ 1.52
TRAPPC9-215ENST00000524162 TKFCQ3LXA3 575 aa24.54■■□□□ 1.52
TRAPPC9-215ENST00000524162 GPATCH4Q5T3I0 446 aaKnown RBP24.54■■□□□ 1.52
TRAPPC9-215ENST00000524162 SNRNP48Q6IEG0 339 aaKnown RBP24.54■■□□□ 1.52
TRAPPC9-215ENST00000524162 SAMD1Q6SPF0 538 aaPredicted RBP24.54■■□□□ 1.52
TRAPPC9-215ENST00000524162 SHISA4Q96DD7 197 aa24.54■■□□□ 1.52
TRAPPC9-215ENST00000524162 MYCP01106 439 aaPredicted RBP24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 CCL14Q16627 93 aa24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 CASC1Q6TDU7 716 aa24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 KCTD1Q719H9 257 aa24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 ENAHQ8N8S7 591 aaPredicted RBP24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 MMP19Q99542 508 aa24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 UBAC1Q9BSL1 405 aa24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 LSG1Q9H089 658 aaKnown RBP24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 PPP4R2Q9NY27 417 aa24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 PRR12Q9ULL5 1215 aa24.53■■□□□ 1.52
TRAPPC9-215ENST00000524162 COBLO75128 1261 aa24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 CACNB2Q08289 660 aaPredicted RBP24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 ZNF543Q08ER8 600 aa24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 UBE2Q1Q7Z7E8 422 aa24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 MSL3Q8N5Y2 521 aaKnown RBP24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 ANKLE1Q8NAG6 615 aa24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 NPLOC4Q8TAT6 608 aa24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 MTA3Q9BTC8 594 aa24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 NRBP1Q9UHY1 535 aa24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 RBM8AQ9Y5S9 174 aaKnown RBP24.52■■□□□ 1.52
TRAPPC9-215ENST00000524162 SMCHD1A6NHR9 2005 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 CEP290O15078 2479 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 CDC45O75419 566 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 TRIM32Q13049 653 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 IKQ13123 557 aaPredicted RBP24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 CCDC96Q2M329 555 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 PNMA1Q8ND90 353 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 NCOA7Q8NI08 942 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 DEFB118Q96PH6 123 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 FLRT1Q9NZU1 646 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 RIPK3Q9Y572 518 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 ZNF536O15090 1300 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 TNKSO95271 1327 aa24.51■■□□□ 1.51
TRAPPC9-215ENST00000524162 DNAJC25-GNG10A0A024R161 153 aa24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 E7EWF7 191 aa24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 MSCO60682 206 aa24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 SEC23AQ15436 765 aa24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 ZNF792Q3KQV3 632 aa24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 CPXCR1Q8N123 301 aa24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 MAML3Q96JK9 1138 aa24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 ZKSCAN3Q9BRR0 538 aa24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 RANBP17Q9H2T7 1088 aaKnown RBP24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 KAT14Q9H8E8 782 aa24.5■■□□□ 1.51
TRAPPC9-215ENST00000524162 RAVER2Q9HCJ3 691 aaKnown RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms