RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 OTUD7BQ6GQQ9 843 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 ZSCAN25Q6NSZ9 544 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 RAB11FIP4Q86YS3 637 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 STRBPQ96SI9 672 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 METTL14Q9HCE5 456 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 GJB4Q9NTQ9 266 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 RGL1Q9NZL6 768 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 MKRN1Q9UHC7 482 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 COL1A1P02452 1464 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 KIF28PB7ZC32 967 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 CAVIN2O95810 425 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 SMARCA1P28370 1054 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 ATL3Q6DD88 541 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 TMCO3Q6UWJ1 677 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 REXO1L1PQ8IX06 675 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 FBXW7Q969H0 707 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 DIS3Q9Y2L1 958 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 TAF1LQ8IZX4 1826 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 KIAA1551Q9HCM1 1747 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 SH2B2O14492 632 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 ZMYND10O75800 440 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 IDH1O75874 414 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 UQCRFS1P1P0C7P4 283 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 CLCN6P51797 869 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 LRRC23Q53EV4 343 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 CCAR1Q8IX12 1150 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 MYOCDQ8IZQ8 938 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 SPATA5Q8NB90 893 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 ACSBG1Q96GR2 724 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 LRRC27Q9C0I9 530 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 HDAC6Q9UBN7 1215 aa8.38□□□□□ -1.07
PDLIM5-219ENST00000514743 MYH2Q9UKX2 1941 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 BTAF1O14981 1849 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 SPATA31A5Q5VU36 1347 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 SPATA31A7Q8IWB4 1347 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 LOC102724428A0A0B4J2F2 783 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 ANKRD62A6NC57 917 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 SIK1P57059 783 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 DDB1Q16531 1140 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 FAAH2Q6GMR7 532 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 ARHGAP22Q7Z5H3 698 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 DRC7Q8IY82 874 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 CDCA7Q9BWT1 371 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 ARGLU1Q9NWB6 273 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 RTEL1Q9NZ71 1219 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 MAST2Q6P0Q8 1798 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 COPB2P35606 906 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 ADCY1Q08828 1119 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 KCNA1Q09470 495 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 PLA2G4DQ86XP0 818 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 EPAS1Q99814 870 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 FAM117AQ9C073 453 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 DNAJC25Q9H1X3 360 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 INCENPQ9NQS7 918 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 PCDHA7Q9UN72 937 aa8.37□□□□□ -1.07
PDLIM5-219ENST00000514743 PTGS1P23219 599 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 BDNFP23560 247 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 CDC27P30260 824 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 TMEM62Q0P6H9 643 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ALX1Q15699 326 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 PKN1Q16512 942 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 KBTBD12Q3ZCT8 623 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ZNF662Q6ZS27 426 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 C11orf57Q6ZUT1 292 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 RALYLQ86SE5 291 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 LINC00301Q8NCQ3 95 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 IGDCC4Q8TDY8 1250 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 CCDC47Q96A33 483 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 UTP14AQ9BVJ6 771 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 NRBP1Q9UHY1 535 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ADAM21Q9UKJ8 722 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ANGEL1Q9UNK9 670 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 CLIC4Q9Y696 253 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 NID2Q14112 1375 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 DUOX1Q9NRD9 1551 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 CHUKO15111 745 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 LRMPQ12912 555 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 KIF4BQ2VIQ3 1234 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 KIRREL3Q8IZU9 778 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 FMR1NBQ8N0W7 255 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ATP11CQ8NB49 1132 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ZKSCAN4Q969J2 545 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 RUFY1Q96T51 708 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 LY9Q9HBG7 655 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 HOMER3Q9NSC5 361 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ORC3Q9UBD5 711 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 B4E1Z4 1266 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 ADAMTS2O95450 1211 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 VDRP11473 427 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 SLC5A1P13866 664 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 H2AFXP16104 143 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 KIF23Q02241 960 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 FAM160A1Q05DH4 1040 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 NSUN2Q08J23 767 aaKnown RBP eCLIP8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 KCNB1Q14721 858 aa8.36□□□□□ -1.07
PDLIM5-219ENST00000514743 NTRK3Q16288 839 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms