RNA–Protein interactions for RNA: ENST00000507012.1

RERE-217, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5

Gene RERE, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-217ENST00000507012 DCAF4Q8WV16 495 aa12.94□□□□□ -0.34
RERE-217ENST00000507012 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
RERE-217ENST00000507012 NUP88Q99567 741 aaPredicted RBP12.94□□□□□ -0.34
RERE-217ENST00000507012 KRT23Q9C075 422 aa12.94□□□□□ -0.34
RERE-217ENST00000507012 CRISPLD2Q9H0B8 497 aa12.94□□□□□ -0.34
RERE-217ENST00000507012 CNNM2Q9H8M5 875 aa12.94□□□□□ -0.34
RERE-217ENST00000507012 IL17RBQ9NRM6 502 aa12.94□□□□□ -0.34
RERE-217ENST00000507012 FBXO40Q9UH90 709 aa12.94□□□□□ -0.34
RERE-217ENST00000507012 PNMA2Q9UL42 364 aa12.94□□□□□ -0.34
RERE-217ENST00000507012 CENPFP49454 3210 aa12.94□□□□□ -0.34
RERE-217ENST00000507012 LAMA4Q16363 1823 aa12.93□□□□□ -0.34
RERE-217ENST00000507012 FARP2O94887 1054 aaPredicted RBP12.93□□□□□ -0.34
RERE-217ENST00000507012 TFRCP02786 760 aaKnown RBP12.93□□□□□ -0.34
RERE-217ENST00000507012 CHMLP26374 656 aa12.93□□□□□ -0.34
RERE-217ENST00000507012 PRPF38BQ5VTL8 546 aaKnown RBP12.93□□□□□ -0.34
RERE-217ENST00000507012 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
RERE-217ENST00000507012 KIFC2Q96AC6 838 aa12.93□□□□□ -0.34
RERE-217ENST00000507012 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
RERE-217ENST00000507012 HTATIP2Q9BUP3 242 aa12.93□□□□□ -0.34
RERE-217ENST00000507012 SLC38A10Q9HBR0 1119 aa12.93□□□□□ -0.34
RERE-217ENST00000507012 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
RERE-217ENST00000507012 DIS3Q9Y2L1 958 aaKnown RBP12.93□□□□□ -0.34
RERE-217ENST00000507012 TMEM232C9JQI7 657 aa12.92□□□□□ -0.34
RERE-217ENST00000507012 NEFLP07196 543 aa12.92□□□□□ -0.34
RERE-217ENST00000507012 CACNB2Q08289 660 aaPredicted RBP12.92□□□□□ -0.34
RERE-217ENST00000507012 IKQ13123 557 aaPredicted RBP12.92□□□□□ -0.34
RERE-217ENST00000507012 SNRNP48Q6IEG0 339 aaKnown RBP12.92□□□□□ -0.34
RERE-217ENST00000507012 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
RERE-217ENST00000507012 TBC1D10CQ8IV04 446 aa12.92□□□□□ -0.34
RERE-217ENST00000507012 CHST13Q8NET6 341 aa12.92□□□□□ -0.34
RERE-217ENST00000507012 MMP19Q99542 508 aa12.92□□□□□ -0.34
RERE-217ENST00000507012 NBPF3Q9H094 633 aa12.92□□□□□ -0.34
RERE-217ENST00000507012 INCENPQ9NQS7 918 aa12.92□□□□□ -0.34
RERE-217ENST00000507012 NRBP1Q9UHY1 535 aa12.92□□□□□ -0.34
RERE-217ENST00000507012 U3KPZ7 1027 aaPredicted RBP12.92□□□□□ -0.34
RERE-217ENST00000507012 COL11A1P12107 1806 aaPredicted RBP12.91□□□□□ -0.34
RERE-217ENST00000507012 NMT2O60551 498 aa12.91□□□□□ -0.34
RERE-217ENST00000507012 MCCP23508 829 aa12.91□□□□□ -0.34
RERE-217ENST00000507012 TRDNQ13061 729 aa12.91□□□□□ -0.34
RERE-217ENST00000507012 CCL14Q16627 93 aa12.91□□□□□ -0.34
RERE-217ENST00000507012 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
RERE-217ENST00000507012 UBE2Q1Q7Z7E8 422 aa12.91□□□□□ -0.34
RERE-217ENST00000507012 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
RERE-217ENST00000507012 TACC3Q9Y6A5 838 aa12.91□□□□□ -0.34
RERE-217ENST00000507012 SGSM2O43147 1006 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 IGHA2P01877 340 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 CCDC96Q2M329 555 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 BMP2KLQ5H9B9 411 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 BTNL9Q6UXG8 535 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 CPXCR1Q8N123 301 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 NPLOC4Q8TAT6 608 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 TMEM47Q9BQJ4 181 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
RERE-217ENST00000507012 TNRC18O15417 2968 aaPredicted RBP12.9□□□□□ -0.35
RERE-217ENST00000507012 NEDD4P46934 1319 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 CEP290O15078 2479 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 COBLO75128 1261 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 KDM4AO75164 1064 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 TRIM32Q13049 653 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 GPATCH4Q5T3I0 446 aaKnown RBP12.89□□□□□ -0.35
RERE-217ENST00000507012 KCTD1Q719H9 257 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 NECAB2Q7Z6G3 386 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 DDX11Q96FC9 970 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 MAML3Q96JK9 1138 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 CCDC136Q96JN2 1154 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 UBAC1Q9BSL1 405 aa12.89□□□□□ -0.35
RERE-217ENST00000507012 B4E1Z4 1266 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 SNHG28P0DPA3 235 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 PDHBP11177 359 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 CYBAP13498 195 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 ZNF792Q3KQV3 632 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
RERE-217ENST00000507012 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
RERE-217ENST00000507012 ACAD9Q9H845 621 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
RERE-217ENST00000507012 FLRT1Q9NZU1 646 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 DDX20Q9UHI6 824 aaKnown RBP12.88□□□□□ -0.35
RERE-217ENST00000507012 PRR12Q9ULL5 1215 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 NR2E3Q9Y5X4 410 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 ZNFX1Q9P2E3 1918 aaKnown RBP12.88□□□□□ -0.35
RERE-217ENST00000507012 PFASO15067 1338 aa12.88□□□□□ -0.35
RERE-217ENST00000507012 DNAJC25-GNG10A0A024R161 153 aa12.87□□□□□ -0.35
RERE-217ENST00000507012 CCND3P30281 292 aaPredicted RBP12.87□□□□□ -0.35
RERE-217ENST00000507012 CYP2C19P33261 490 aa12.87□□□□□ -0.35
RERE-217ENST00000507012 ZNF543Q08ER8 600 aa12.87□□□□□ -0.35
RERE-217ENST00000507012 SYDE2Q5VT97 1194 aa12.87□□□□□ -0.35
RERE-217ENST00000507012 RALYLQ86SE5 291 aaKnown RBP12.87□□□□□ -0.35
RERE-217ENST00000507012 ANKRD35Q8N283 1001 aa12.87□□□□□ -0.35
RERE-217ENST00000507012 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
RERE-217ENST00000507012 IL25Q9H293 177 aa12.87□□□□□ -0.35
RERE-217ENST00000507012 ZSWIM5Q9P217 1185 aa12.87□□□□□ -0.35
RERE-217ENST00000507012 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
RERE-217ENST00000507012 SEPT4O43236 478 aa12.86□□□□□ -0.35
RERE-217ENST00000507012 ICAM1P05362 532 aa12.86□□□□□ -0.35
RERE-217ENST00000507012 CNGA1P29973 690 aa12.86□□□□□ -0.35
RERE-217ENST00000507012 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms