RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 PRAMEF19Q5SWL8 479 aa13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 GJC2Q5T442 439 aaPredicted RBP13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 REPS2Q8NFH8 660 aa13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 MKL1Q969V6 931 aa13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 CEP95Q96GE4 821 aa13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 MTMR4Q9NYA4 1195 aa13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 PRKAG2Q9UGJ0 569 aa13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 MYH4Q9Y623 1939 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 PPARAQ07869 468 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 ZNF792Q3KQV3 632 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 ANO1Q5XXA6 986 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 SNRNP48Q6IEG0 339 aaKnown RBP13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 TDHQ8IZJ6 230 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 GMCL1P1Q8NEA9 526 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 NEDD1Q8NHV4 660 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 KIFC2Q96AC6 838 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 EVI5LQ96CN4 794 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 CRBNQ96SW2 442 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 LBHD1Q9BQE6 289 aaPredicted RBP13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 TINF2Q9BSI4 451 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 FEM1BQ9UK73 627 aa13.98□□□□□ -0.17
NUDCD3-211ENST00000497978 ATP2A1O14983 1001 aa13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 RARBP10826 455 aa13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 SLC4A3P48751 1232 aa13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 RTP1P59025 263 aa13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 TFAP4Q01664 338 aa13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 CPXCR1Q8N123 301 aa13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 LRRC47Q8N1G4 583 aaKnown RBP13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 DDX11Q96FC9 970 aa13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 ISY1Q9ULR0 285 aaKnown RBP13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 CNPY2Q9Y2B0 182 aa13.97□□□□□ -0.17
NUDCD3-211ENST00000497978 PLIN4Q96Q06 1357 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 PLXNA1Q9UIW2 1896 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 SOX1O00570 391 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 MDM2Q00987 491 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 LRRC41Q15345 812 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 LRIT3Q3SXY7 679 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 FAM47AQ5JRC9 791 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 SLFN13Q68D06 897 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 SLC39A5Q6ZMH5 540 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 LRCH3Q96II8 777 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 XPNPEP3Q9NQH7 507 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 FBXO40Q9UH90 709 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 ATP11BQ9Y2G3 1177 aa13.96□□□□□ -0.17
NUDCD3-211ENST00000497978 SALL3Q9BXA9 1300 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 TSPY2A6NKD2 308 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 FDX1P10109 184 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 BMP3P12645 472 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 AKR1A1P14550 325 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 OAZ1P54368 228 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 AAMPQ13685 434 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 CCDC129Q6ZRS4 1044 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 RNF180Q86T96 592 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 SLC38A10Q9HBR0 1119 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 RAVER2Q9HCJ3 691 aaKnown RBP13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 HELLSQ9NRZ9 838 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 RIPK3Q9Y572 518 aa13.95□□□□□ -0.18
NUDCD3-211ENST00000497978 SYNGAP1Q96PV0 1343 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 TMEM232C9JQI7 657 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 ADCYAP1R1P41586 468 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 SLC1A4P43007 532 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 STAT2P52630 851 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 PDE1AP54750 535 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 IKQ13123 557 aaPredicted RBP13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 FAM160B2Q86V87 743 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 TICAM2Q86XR7 235 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 ANKRD35Q8N283 1001 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 CHST13Q8NET6 341 aa13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 CIZ1Q9ULV3 898 aaPredicted RBP13.94□□□□□ -0.18
NUDCD3-211ENST00000497978 SMCHD1A6NHR9 2005 aa13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 ZNF865P0CJ78 1059 aaPredicted RBP13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 TAL1P17542 331 aaPredicted RBP13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 CTDSPL2Q05D32 466 aa13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 ZNF467Q7Z7K2 595 aaPredicted RBP13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 FERMT2Q96AC1 680 aa13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 GMCL1Q96IK5 515 aa13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 PRDM5Q9NQX1 630 aaPredicted RBP13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 FAM184BQ9ULE4 1060 aa13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 STX8Q9UNK0 236 aa13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
NUDCD3-211ENST00000497978 DNAJC25-GNG10A0A024R161 153 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 PGK1P00558 417 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 MCCP23508 829 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 SNX17Q15036 470 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 ALX1Q15699 326 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 TRIM60Q495X7 471 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 MCMDC2Q4G0Z9 681 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 C1orf53Q5VUE5 145 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 STAG1Q8WVM7 1258 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 YTHDC1Q96MU7 727 aaKnown RBP13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 HOMER2Q9NSB8 354 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms