RNA–Protein interactions for RNA: ENST00000496027.5

CCDC13-209, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 386 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-209ENST00000496027 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
CCDC13-209ENST00000496027 DGKHQ86XP1 1220 aa15.71■□□□□ 0.11
CCDC13-209ENST00000496027 DEFB118Q96PH6 123 aa15.71■□□□□ 0.11
CCDC13-209ENST00000496027 INCENPQ9NQS7 918 aa15.71■□□□□ 0.11
CCDC13-209ENST00000496027 FBXO40Q9UH90 709 aa15.71■□□□□ 0.11
CCDC13-209ENST00000496027 PNMA2Q9UL42 364 aa15.71■□□□□ 0.11
CCDC13-209ENST00000496027 ZNF214Q9UL59 606 aaPredicted RBP15.71■□□□□ 0.11
CCDC13-209ENST00000496027 TMEM232C9JQI7 657 aa15.7■□□□□ 0.1
CCDC13-209ENST00000496027 HAND2P61296 217 aa15.7■□□□□ 0.1
CCDC13-209ENST00000496027 CACNB2Q08289 660 aaPredicted RBP15.7■□□□□ 0.1
CCDC13-209ENST00000496027 LRRC47Q8N1G4 583 aaKnown RBP15.7■□□□□ 0.1
CCDC13-209ENST00000496027 REPS2Q8NFH8 660 aa15.7■□□□□ 0.1
CCDC13-209ENST00000496027 DCAF4Q8WV16 495 aa15.7■□□□□ 0.1
CCDC13-209ENST00000496027 KIFC2Q96AC6 838 aa15.7■□□□□ 0.1
CCDC13-209ENST00000496027 NUP88Q99567 741 aaPredicted RBP15.7■□□□□ 0.1
CCDC13-209ENST00000496027 HTATIP2Q9BUP3 242 aa15.7■□□□□ 0.1
CCDC13-209ENST00000496027 SLC38A10Q9HBR0 1119 aa15.7■□□□□ 0.1
CCDC13-209ENST00000496027 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
CCDC13-209ENST00000496027 ZNF236Q9UL36 1845 aa15.69■□□□□ 0.1
CCDC13-209ENST00000496027 PRKAR2AP13861 404 aaKnown RBP15.69■□□□□ 0.1
CCDC13-209ENST00000496027 MCCP23508 829 aa15.69■□□□□ 0.1
CCDC13-209ENST00000496027 CHST13Q8NET6 341 aa15.69■□□□□ 0.1
CCDC13-209ENST00000496027 MMP19Q99542 508 aa15.69■□□□□ 0.1
CCDC13-209ENST00000496027 NRBP1Q9UHY1 535 aa15.69■□□□□ 0.1
CCDC13-209ENST00000496027 TRDNQ13061 729 aa15.68■□□□□ 0.1
CCDC13-209ENST00000496027 IKQ13123 557 aaPredicted RBP15.68■□□□□ 0.1
CCDC13-209ENST00000496027 TKFCQ3LXA3 575 aa15.68■□□□□ 0.1
CCDC13-209ENST00000496027 PRPF38BQ5VTL8 546 aaKnown RBP15.68■□□□□ 0.1
CCDC13-209ENST00000496027 SNRNP48Q6IEG0 339 aaKnown RBP15.68■□□□□ 0.1
CCDC13-209ENST00000496027 KIAA1211Q6ZU35 1233 aa15.68■□□□□ 0.1
CCDC13-209ENST00000496027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCDC13-209ENST00000496027 MSL3Q8N5Y2 521 aaKnown RBP15.68■□□□□ 0.1
CCDC13-209ENST00000496027 ANKS1AQ92625 1134 aa15.68■□□□□ 0.1
CCDC13-209ENST00000496027 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
CCDC13-209ENST00000496027 TMEM47Q9BQJ4 181 aa15.68■□□□□ 0.1
CCDC13-209ENST00000496027 TACC3Q9Y6A5 838 aa15.68■□□□□ 0.1
CCDC13-209ENST00000496027 PDE4DIPQ5VU43 2346 aa15.68■□□□□ 0.1
CCDC13-209ENST00000496027 NMT2O60551 498 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 IGHA2P01877 340 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 NEFLP07196 543 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 CCL14Q16627 93 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 BTNL9Q6UXG8 535 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 NECAB2Q7Z6G3 386 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 UBE2Q1Q7Z7E8 422 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 CPXCR1Q8N123 301 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 NPLOC4Q8TAT6 608 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 ZSWIM5Q9P217 1185 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 OGDHLQ9ULD0 1010 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 ISY1Q9ULR0 285 aaKnown RBP15.67■□□□□ 0.1
CCDC13-209ENST00000496027 HTTP42858 3142 aa15.67■□□□□ 0.1
CCDC13-209ENST00000496027 LAMA4Q16363 1823 aa15.66■□□□□ 0.1
CCDC13-209ENST00000496027 SGSM2O43147 1006 aa15.66■□□□□ 0.1
CCDC13-209ENST00000496027 COBLO75128 1261 aa15.66■□□□□ 0.1
CCDC13-209ENST00000496027 FARP2O94887 1054 aaPredicted RBP15.66■□□□□ 0.1
CCDC13-209ENST00000496027 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
CCDC13-209ENST00000496027 SHISA4Q96DD7 197 aa15.66■□□□□ 0.1
CCDC13-209ENST00000496027 CCDC136Q96JN2 1154 aa15.66■□□□□ 0.1
CCDC13-209ENST00000496027 NBPF3Q9H094 633 aa15.66■□□□□ 0.1
CCDC13-209ENST00000496027 KDM4AO75164 1064 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 TRIM32Q13049 653 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 ZNF792Q3KQV3 632 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 BMP2KLQ5H9B9 411 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 ZNF467Q7Z7K2 595 aaPredicted RBP15.65■□□□□ 0.1
CCDC13-209ENST00000496027 TBC1D10CQ8IV04 446 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 MAP4K1Q92918 833 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 MAML3Q96JK9 1138 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 ZSCAN10Q96SZ4 725 aaPredicted RBP15.65■□□□□ 0.1
CCDC13-209ENST00000496027 RAVER2Q9HCJ3 691 aaKnown RBP15.65■□□□□ 0.1
CCDC13-209ENST00000496027 FLRT1Q9NZU1 646 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 NR2E3Q9Y5X4 410 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 PLXNA1Q9UIW2 1896 aa15.65■□□□□ 0.1
CCDC13-209ENST00000496027 TNRC18O15417 2968 aaPredicted RBP15.64■□□□□ 0.09
CCDC13-209ENST00000496027 CNGA1P29973 690 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 CCDC96Q2M329 555 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 ERICH6BQ5W0A0 696 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 LHX8Q68G74 356 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 CASC1Q6TDU7 716 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 KCTD1Q719H9 257 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 ANKRD35Q8N283 1001 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 ARRDC4Q8NCT1 418 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 DPF3Q92784 378 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 TINF2Q9BSI4 451 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 UBAC1Q9BSL1 405 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 MAF1Q9H063 256 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 KAT14Q9H8E8 782 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 PRR12Q9ULL5 1215 aa15.64■□□□□ 0.09
CCDC13-209ENST00000496027 DNAJC25-GNG10A0A024R161 153 aa15.63■□□□□ 0.09
CCDC13-209ENST00000496027 B4E1Z4 1266 aa15.63■□□□□ 0.09
CCDC13-209ENST00000496027 SNHG28P0DPA3 235 aa15.63■□□□□ 0.09
CCDC13-209ENST00000496027 PDHBP11177 359 aa15.63■□□□□ 0.09
CCDC13-209ENST00000496027 CCND3P30281 292 aaPredicted RBP15.63■□□□□ 0.09
CCDC13-209ENST00000496027 CYP2C19P33261 490 aa15.63■□□□□ 0.09
CCDC13-209ENST00000496027 MAMDC4Q6UXC1 1216 aa15.63■□□□□ 0.09
CCDC13-209ENST00000496027 ACAD9Q9H845 621 aa15.63■□□□□ 0.09
CCDC13-209ENST00000496027 DDX20Q9UHI6 824 aaKnown RBP15.63■□□□□ 0.09
CCDC13-209ENST00000496027 RIPK3Q9Y572 518 aa15.63■□□□□ 0.09
CCDC13-209ENST00000496027 CENPFP49454 3210 aa15.62■□□□□ 0.09
CCDC13-209ENST00000496027 ERICH2A1L162 156 aa15.62■□□□□ 0.09
CCDC13-209ENST00000496027 SEPT4O43236 478 aa15.62■□□□□ 0.09
CCDC13-209ENST00000496027 ICAM1P05362 532 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms