RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 DEFB118Q96PH6 123 aa28.3■■■□□ 2.12
PTPN18-213ENST00000489215 LAMA4Q16363 1823 aa28.29■■■□□ 2.12
PTPN18-213ENST00000489215 NMT2O60551 498 aa28.29■■■□□ 2.12
PTPN18-213ENST00000489215 TFRCP02786 760 aaKnown RBP28.29■■■□□ 2.12
PTPN18-213ENST00000489215 PRKAR2AP13861 404 aaKnown RBP28.29■■■□□ 2.12
PTPN18-213ENST00000489215 IQCA1Q86XH1 822 aa28.29■■■□□ 2.12
PTPN18-213ENST00000489215 REPS2Q8NFH8 660 aa28.29■■■□□ 2.12
PTPN18-213ENST00000489215 KRT23Q9C075 422 aa28.29■■■□□ 2.12
PTPN18-213ENST00000489215 CNNM2Q9H8M5 875 aa28.29■■■□□ 2.12
PTPN18-213ENST00000489215 ISY1Q9ULR0 285 aaKnown RBP28.29■■■□□ 2.12
PTPN18-213ENST00000489215 TMEM232C9JQI7 657 aa28.28■■■□□ 2.12
PTPN18-213ENST00000489215 MCCP23508 829 aa28.28■■■□□ 2.12
PTPN18-213ENST00000489215 IKQ13123 557 aaPredicted RBP28.28■■■□□ 2.12
PTPN18-213ENST00000489215 KCTD2Q14681 263 aa28.28■■■□□ 2.12
PTPN18-213ENST00000489215 TBC1D10CQ8IV04 446 aa28.28■■■□□ 2.12
PTPN18-213ENST00000489215 DCAF4Q8WV16 495 aa28.28■■■□□ 2.12
PTPN18-213ENST00000489215 NBPF3Q9H094 633 aa28.28■■■□□ 2.12
PTPN18-213ENST00000489215 SLC38A10Q9HBR0 1119 aa28.28■■■□□ 2.12
PTPN18-213ENST00000489215 NEFLP07196 543 aa28.27■■■□□ 2.12
PTPN18-213ENST00000489215 OLFML2BQ68BL8 750 aa28.27■■■□□ 2.12
PTPN18-213ENST00000489215 DGKHQ86XP1 1220 aa28.27■■■□□ 2.12
PTPN18-213ENST00000489215 MMP19Q99542 508 aa28.27■■■□□ 2.12
PTPN18-213ENST00000489215 CRISPLD2Q9H0B8 497 aa28.27■■■□□ 2.12
PTPN18-213ENST00000489215 CACNB2Q08289 660 aaPredicted RBP28.26■■■□□ 2.11
PTPN18-213ENST00000489215 CCL14Q16627 93 aa28.26■■■□□ 2.11
PTPN18-213ENST00000489215 SNRNP48Q6IEG0 339 aaKnown RBP28.26■■■□□ 2.11
PTPN18-213ENST00000489215 ANKLE1Q8NAG6 615 aa28.26■■■□□ 2.11
PTPN18-213ENST00000489215 SHISA4Q96DD7 197 aa28.26■■■□□ 2.11
PTPN18-213ENST00000489215 FBXO40Q9UH90 709 aa28.26■■■□□ 2.11
PTPN18-213ENST00000489215 DIS3Q9Y2L1 958 aaKnown RBP28.26■■■□□ 2.11
PTPN18-213ENST00000489215 ZNFX1Q9P2E3 1918 aaKnown RBP28.26■■■□□ 2.11
PTPN18-213ENST00000489215 TRIM32Q13049 653 aa28.25■■■□□ 2.11
PTPN18-213ENST00000489215 NPLOC4Q8TAT6 608 aa28.25■■■□□ 2.11
PTPN18-213ENST00000489215 CCDC136Q96JN2 1154 aa28.25■■■□□ 2.11
PTPN18-213ENST00000489215 TMEM47Q9BQJ4 181 aa28.25■■■□□ 2.11
PTPN18-213ENST00000489215 U3KPZ7 1027 aaPredicted RBP28.25■■■□□ 2.11
PTPN18-213ENST00000489215 PDE4DIPQ5VU43 2346 aa28.24■■■□□ 2.11
PTPN18-213ENST00000489215 SGSM2O43147 1006 aa28.24■■■□□ 2.11
PTPN18-213ENST00000489215 CPXCR1Q8N123 301 aa28.24■■■□□ 2.11
PTPN18-213ENST00000489215 MSCO60682 206 aa28.23■■■□□ 2.11
PTPN18-213ENST00000489215 TRDNQ13061 729 aa28.23■■■□□ 2.11
PTPN18-213ENST00000489215 CHST13Q8NET6 341 aa28.23■■■□□ 2.11
PTPN18-213ENST00000489215 HTATIP2Q9BUP3 242 aa28.23■■■□□ 2.11
PTPN18-213ENST00000489215 NEDD4P46934 1319 aa28.22■■■□□ 2.11
PTPN18-213ENST00000489215 KDM4AO75164 1064 aa28.22■■■□□ 2.11
PTPN18-213ENST00000489215 FARP2O94887 1054 aaPredicted RBP28.22■■■□□ 2.11
PTPN18-213ENST00000489215 CCDC96Q2M329 555 aa28.22■■■□□ 2.11
PTPN18-213ENST00000489215 KIAA1211Q6ZU35 1233 aa28.22■■■□□ 2.11
PTPN18-213ENST00000489215 KCTD1Q719H9 257 aa28.22■■■□□ 2.11
PTPN18-213ENST00000489215 COBLO75128 1261 aa28.21■■■□□ 2.11
PTPN18-213ENST00000489215 TKFCQ3LXA3 575 aa28.21■■■□□ 2.11
PTPN18-213ENST00000489215 BMP2KLQ5H9B9 411 aa28.21■■■□□ 2.11
PTPN18-213ENST00000489215 PRPF38BQ5VTL8 546 aaKnown RBP28.21■■■□□ 2.11
PTPN18-213ENST00000489215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.21■■■□□ 2.11
PTPN18-213ENST00000489215 DDX11Q96FC9 970 aa28.21■■■□□ 2.11
PTPN18-213ENST00000489215 IL25Q9H293 177 aa28.21■■■□□ 2.11
PTPN18-213ENST00000489215 RAVER2Q9HCJ3 691 aaKnown RBP28.21■■■□□ 2.11
PTPN18-213ENST00000489215 FLRT1Q9NZU1 646 aa28.21■■■□□ 2.11
PTPN18-213ENST00000489215 PNMA2Q9UL42 364 aa28.21■■■□□ 2.11
PTPN18-213ENST00000489215 TNRC18O15417 2968 aaPredicted RBP28.21■■■□□ 2.11
PTPN18-213ENST00000489215 B4E1Z4 1266 aa28.2■■■□□ 2.1
PTPN18-213ENST00000489215 UBE2Q1Q7Z7E8 422 aa28.2■■■□□ 2.1
PTPN18-213ENST00000489215 ANKS1AQ92625 1134 aa28.2■■■□□ 2.1
PTPN18-213ENST00000489215 MAML3Q96JK9 1138 aa28.2■■■□□ 2.1
PTPN18-213ENST00000489215 ZSWIM5Q9P217 1185 aa28.2■■■□□ 2.1
PTPN18-213ENST00000489215 BRCA2P51587 3418 aa28.19■■■□□ 2.1
PTPN18-213ENST00000489215 IGHA2P01877 340 aa28.19■■■□□ 2.1
PTPN18-213ENST00000489215 BTNL9Q6UXG8 535 aa28.19■■■□□ 2.1
PTPN18-213ENST00000489215 MSL3Q8N5Y2 521 aaKnown RBP28.19■■■□□ 2.1
PTPN18-213ENST00000489215 ZSCAN10Q96SZ4 725 aaPredicted RBP28.19■■■□□ 2.1
PTPN18-213ENST00000489215 UBAC1Q9BSL1 405 aa28.19■■■□□ 2.1
PTPN18-213ENST00000489215 NRBP1Q9UHY1 535 aa28.19■■■□□ 2.1
PTPN18-213ENST00000489215 OGDHLQ9ULD0 1010 aa28.19■■■□□ 2.1
PTPN18-213ENST00000489215 PRR12Q9ULL5 1215 aa28.19■■■□□ 2.1
PTPN18-213ENST00000489215 MTMR7Q9Y216 660 aa28.19■■■□□ 2.1
PTPN18-213ENST00000489215 SLC4A3P48751 1232 aa28.18■■■□□ 2.1
PTPN18-213ENST00000489215 GPATCH4Q5T3I0 446 aaKnown RBP28.18■■■□□ 2.1
PTPN18-213ENST00000489215 KAT14Q9H8E8 782 aa28.18■■■□□ 2.1
PTPN18-213ENST00000489215 RIPK3Q9Y572 518 aa28.18■■■□□ 2.1
PTPN18-213ENST00000489215 PDHBP11177 359 aa28.17■■■□□ 2.1
PTPN18-213ENST00000489215 CCND3P30281 292 aaPredicted RBP28.17■■■□□ 2.1
PTPN18-213ENST00000489215 CYP2C19P33261 490 aa28.17■■■□□ 2.1
PTPN18-213ENST00000489215 NECAB2Q7Z6G3 386 aa28.17■■■□□ 2.1
PTPN18-213ENST00000489215 ANKRD35Q8N283 1001 aa28.17■■■□□ 2.1
PTPN18-213ENST00000489215 MAP4K1Q92918 833 aa28.17■■■□□ 2.1
PTPN18-213ENST00000489215 ZKSCAN3Q9BRR0 538 aa28.17■■■□□ 2.1
PTPN18-213ENST00000489215 CNGA1P29973 690 aa28.16■■■□□ 2.1
PTPN18-213ENST00000489215 PTH1RQ03431 593 aa28.16■■■□□ 2.1
PTPN18-213ENST00000489215 ZNF792Q3KQV3 632 aa28.16■■■□□ 2.1
PTPN18-213ENST00000489215 CASC1Q6TDU7 716 aa28.16■■■□□ 2.1
PTPN18-213ENST00000489215 PLXNA1Q9UIW2 1896 aa28.15■■■□□ 2.1
PTPN18-213ENST00000489215 SNHG28P0DPA3 235 aa28.15■■■□□ 2.1
PTPN18-213ENST00000489215 PNMA1Q8ND90 353 aa28.15■■■□□ 2.1
PTPN18-213ENST00000489215 CHMP4CQ96CF2 233 aa28.15■■■□□ 2.1
PTPN18-213ENST00000489215 ACAD9Q9H845 621 aa28.15■■■□□ 2.1
PTPN18-213ENST00000489215 DDX20Q9UHI6 824 aaKnown RBP28.15■■■□□ 2.1
PTPN18-213ENST00000489215 PGK2P07205 417 aa28.14■■■□□ 2.1
PTPN18-213ENST00000489215 CYP21A2P08686 494 aa28.14■■■□□ 2.1
PTPN18-213ENST00000489215 CYBAP13498 195 aa28.14■■■□□ 2.1
PTPN18-213ENST00000489215 ZNF543Q08ER8 600 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms