RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 MSCO60682 206 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 MDM2Q00987 491 aaPredicted RBP13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 TFAP4Q01664 338 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 KIFC2Q96AC6 838 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 FGD4Q96M96 766 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 TINF2Q9BSI4 451 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 RAVER2Q9HCJ3 691 aaKnown RBP13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 IL17RBQ9NRM6 502 aa13.37□□□□□ -0.27
PCYT1A-215ENST00000488235 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 DNAJC25-GNG10A0A024R161 153 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 TTLL1O95922 423 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 ZNF865P0CJ78 1059 aaPredicted RBP13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 TSPY3P0CV98 308 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 TSPY8P0CW00 308 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 LRRC41Q15345 812 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 ZNF589Q86UQ0 364 aaPredicted RBP13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 PRPF38AQ8NAV1 312 aaKnown RBP13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 NACAP1Q9BZK3 213 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 SLC38A10Q9HBR0 1119 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 MYH4Q9Y623 1939 aa13.36□□□□□ -0.27
PCYT1A-215ENST00000488235 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 SNAI1O95863 264 aaPredicted RBP13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 PGK1P00558 417 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 IGHDP01880 384 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 ADCYAP1R1P41586 468 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 RTP1P59025 263 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 IRX5P78411 483 aaPredicted RBP13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 PDE4BQ07343 736 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 KCTD2Q14681 263 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 SLFN13Q68D06 897 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 FERMT2Q96AC1 680 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 SLC5A4Q9NY91 659 aa13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 DIS3Q9Y2L1 958 aaKnown RBP13.35□□□□□ -0.27
PCYT1A-215ENST00000488235 PLXNA1Q9UIW2 1896 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 ADCY6O43306 1168 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 BMP3P12645 472 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 MCCP23508 829 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 SNAP25P60880 206 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 B4GALNT3Q6L9W6 998 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 SLC39A5Q6ZMH5 540 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 TDHQ8IZJ6 230 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 UBE2OQ9C0C9 1292 aaKnown RBP13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 ZNF287Q9HBT7 754 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 ATP11BQ9Y2G3 1177 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 DDX49Q9Y6V7 483 aaKnown RBP13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 ZNF536O15090 1300 aa13.34□□□□□ -0.27
PCYT1A-215ENST00000488235 TMEM232C9JQI7 657 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 ZBED4O75132 1171 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 FGAP02671 866 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 NMIQ13287 307 aaPredicted RBP13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 SNX17Q15036 470 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 TRIM60Q495X7 471 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 KCTD1Q719H9 257 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 Q7L0L9 218 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 SH3RF1Q7Z6J0 888 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 SMC5Q8IY18 1101 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 EXOC6Q8TAG9 804 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 XPNPEP3Q9NQH7 507 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 ANAPC4Q9UJX5 808 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 FEM1BQ9UK73 627 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
PCYT1A-215ENST00000488235 MYADML2A6NDP7 307 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 ADAMTS4O75173 837 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 FGRP09769 529 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 RARBP10826 455 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 COPB2P35606 906 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 NOVP48745 357 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 ALX1Q15699 326 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 LRIT3Q3SXY7 679 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 MAMDC4Q6UXC1 1216 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 AGBL1Q96MI9 1066 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 HELLSQ9NRZ9 838 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 NRBP1Q9UHY1 535 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 STX8Q9UNK0 236 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 MTMR7Q9Y216 660 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 ASTN1O14525 1302 aa13.32□□□□□ -0.28
PCYT1A-215ENST00000488235 CHD9Q3L8U1 2897 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 RANBP6O60518 1105 aaKnown RBP13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 SLC3A2P08195 630 aaKnown RBP13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 HSPD1P10809 573 aaKnown RBP13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 PTGS1P23219 599 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 ITGB8P26012 769 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 STAT2P52630 851 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 HAND2P61296 217 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 CNTN2Q02246 1040 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 MCMDC2Q4G0Z9 681 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms