RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 TEX13BQ9BXU2 312 aa17.8■□□□□ 0.44
COL16A1-213ENST00000482910 SLC38A10Q9HBR0 1119 aa17.8■□□□□ 0.44
COL16A1-213ENST00000482910 B4E1Z4 1266 aa17.79■□□□□ 0.44
COL16A1-213ENST00000482910 ZBED4O75132 1171 aa17.79■□□□□ 0.44
COL16A1-213ENST00000482910 KDM4AO75164 1064 aa17.79■□□□□ 0.44
COL16A1-213ENST00000482910 MCCP23508 829 aa17.79■□□□□ 0.44
COL16A1-213ENST00000482910 NCAPG2Q86XI2 1143 aa17.79■□□□□ 0.44
COL16A1-213ENST00000482910 TRIB2Q92519 343 aa17.79■□□□□ 0.44
COL16A1-213ENST00000482910 ESYT1Q9BSJ8 1104 aa17.79■□□□□ 0.44
COL16A1-213ENST00000482910 ZNFX1Q9P2E3 1918 aaKnown RBP17.78■□□□□ 0.44
COL16A1-213ENST00000482910 TMEM232C9JQI7 657 aa17.78■□□□□ 0.44
COL16A1-213ENST00000482910 CYP21A2P08686 494 aa17.78■□□□□ 0.44
COL16A1-213ENST00000482910 ZKSCAN1P17029 563 aaPredicted RBP17.78■□□□□ 0.44
COL16A1-213ENST00000482910 MAP3K21Q5TCX8 1036 aa17.78■□□□□ 0.44
COL16A1-213ENST00000482910 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
COL16A1-213ENST00000482910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL16A1-213ENST00000482910 SKAP1Q86WV1 359 aa17.78■□□□□ 0.44
COL16A1-213ENST00000482910 KIFC2Q96AC6 838 aa17.78■□□□□ 0.44
COL16A1-213ENST00000482910 RNF208Q9H0X6 261 aa17.78■□□□□ 0.44
COL16A1-213ENST00000482910 PAK6Q9NQU5 681 aaPredicted RBP17.78■□□□□ 0.44
COL16A1-213ENST00000482910 PPP4R2Q9NY27 417 aa17.78■□□□□ 0.44
COL16A1-213ENST00000482910 ZSWIM5Q9P217 1185 aa17.78■□□□□ 0.44
COL16A1-213ENST00000482910 RPTORQ8N122 1335 aa17.77■□□□□ 0.44
COL16A1-213ENST00000482910 SNHG28P0DPA3 235 aa17.77■□□□□ 0.44
COL16A1-213ENST00000482910 FCER1AP12319 257 aa17.77■□□□□ 0.44
COL16A1-213ENST00000482910 ADORA2AP29274 412 aa17.77■□□□□ 0.44
COL16A1-213ENST00000482910 GJA8P48165 433 aa17.77■□□□□ 0.44
COL16A1-213ENST00000482910 TRDNQ13061 729 aa17.77■□□□□ 0.44
COL16A1-213ENST00000482910 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
COL16A1-213ENST00000482910 ZSCAN10Q96SZ4 725 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-213ENST00000482910 UNC93B1Q9H1C4 597 aa17.77■□□□□ 0.44
COL16A1-213ENST00000482910 SLC5A4Q9NY91 659 aa17.77■□□□□ 0.44
COL16A1-213ENST00000482910 CTDP1Q9Y5B0 961 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-213ENST00000482910 MYCP01106 439 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-213ENST00000482910 IGHA2P01877 340 aa17.76■□□□□ 0.43
COL16A1-213ENST00000482910 PDHBP11177 359 aa17.76■□□□□ 0.43
COL16A1-213ENST00000482910 EN2P19622 333 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-213ENST00000482910 CASC1Q6TDU7 716 aa17.76■□□□□ 0.43
COL16A1-213ENST00000482910 KCTD1Q719H9 257 aa17.76■□□□□ 0.43
COL16A1-213ENST00000482910 DPP9Q86TI2 863 aa17.76■□□□□ 0.43
COL16A1-213ENST00000482910 LSG1Q9H089 658 aaKnown RBP17.76■□□□□ 0.43
COL16A1-213ENST00000482910 HMX1Q9NP08 348 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-213ENST00000482910 RBM8AQ9Y5S9 174 aaKnown RBP17.76■□□□□ 0.43
COL16A1-213ENST00000482910 BRCA2P51587 3418 aa17.76■□□□□ 0.43
COL16A1-213ENST00000482910 CDC45O75419 566 aa17.75■□□□□ 0.43
COL16A1-213ENST00000482910 IKQ13123 557 aaPredicted RBP17.75■□□□□ 0.43
COL16A1-213ENST00000482910 CCDC96Q2M329 555 aa17.75■□□□□ 0.43
COL16A1-213ENST00000482910 OLFML2BQ68BL8 750 aa17.75■□□□□ 0.43
COL16A1-213ENST00000482910 SNRNP48Q6IEG0 339 aaKnown RBP17.75■□□□□ 0.43
COL16A1-213ENST00000482910 ENAHQ8N8S7 591 aaPredicted RBP17.75■□□□□ 0.43
COL16A1-213ENST00000482910 NPLOC4Q8TAT6 608 aa17.75■□□□□ 0.43
COL16A1-213ENST00000482910 ZKSCAN3Q9BRR0 538 aa17.75■□□□□ 0.43
COL16A1-213ENST00000482910 UBAC1Q9BSL1 405 aa17.75■□□□□ 0.43
COL16A1-213ENST00000482910 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL16A1-213ENST00000482910 ISY1Q9ULR0 285 aaKnown RBP17.75■□□□□ 0.43
COL16A1-213ENST00000482910 DIS3Q9Y2L1 958 aaKnown RBP17.75■□□□□ 0.43
COL16A1-213ENST00000482910 TNKSO95271 1327 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 SGPL1O95470 568 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 PRKAR2AP13861 404 aaKnown RBP17.74■□□□□ 0.43
COL16A1-213ENST00000482910 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 KCTD2Q14681 263 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 CCL14Q16627 93 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 GPATCH4Q5T3I0 446 aaKnown RBP17.74■□□□□ 0.43
COL16A1-213ENST00000482910 MFSD14CQ5VZR4 134 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 PNMA1Q8ND90 353 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 CHST13Q8NET6 341 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 NCOA7Q8NI08 942 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 U2AF1L4Q8WU68 220 aaKnown RBP17.74■□□□□ 0.43
COL16A1-213ENST00000482910 MMP19Q99542 508 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 FBXO40Q9UH90 709 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 PRR12Q9ULL5 1215 aa17.74■□□□□ 0.43
COL16A1-213ENST00000482910 PDE4DIPQ5VU43 2346 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 E7EWF7 191 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 COBLO75128 1261 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 CACNB2Q08289 660 aaPredicted RBP17.73■□□□□ 0.43
COL16A1-213ENST00000482910 TRIM32Q13049 653 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 TKFCQ3LXA3 575 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 RASGRP2Q7LDG7 609 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 RALYLQ86SE5 291 aaKnown RBP17.73■□□□□ 0.43
COL16A1-213ENST00000482910 CPXCR1Q8N123 301 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 SHISA4Q96DD7 197 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 CRISPLD2Q9H0B8 497 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 KAT14Q9H8E8 782 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 RAVER2Q9HCJ3 691 aaKnown RBP17.73■□□□□ 0.43
COL16A1-213ENST00000482910 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 RIPK3Q9Y572 518 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 PLXNA1Q9UIW2 1896 aa17.73■□□□□ 0.43
COL16A1-213ENST00000482910 ZNF536O15090 1300 aa17.72■□□□□ 0.43
COL16A1-213ENST00000482910 TNRC18O15417 2968 aaPredicted RBP17.72■□□□□ 0.43
COL16A1-213ENST00000482910 NECTIN1Q15223 517 aa17.72■□□□□ 0.43
COL16A1-213ENST00000482910 SEC23AQ15436 765 aa17.72■□□□□ 0.43
COL16A1-213ENST00000482910 SYDE2Q5VT97 1194 aa17.72■□□□□ 0.43
COL16A1-213ENST00000482910 CYB5R4Q7L1T6 521 aa17.72■□□□□ 0.43
COL16A1-213ENST00000482910 MTA3Q9BTC8 594 aa17.72■□□□□ 0.43
COL16A1-213ENST00000482910 RANBP17Q9H2T7 1088 aaKnown RBP17.72■□□□□ 0.43
COL16A1-213ENST00000482910 ANO2Q9NQ90 1003 aa17.72■□□□□ 0.43
COL16A1-213ENST00000482910 FLRT1Q9NZU1 646 aa17.72■□□□□ 0.43
COL16A1-213ENST00000482910 MTMR7Q9Y216 660 aa17.72■□□□□ 0.43
COL16A1-213ENST00000482910 DNAJC25-GNG10A0A024R161 153 aa17.71■□□□□ 0.43
COL16A1-213ENST00000482910 ZNF792Q3KQV3 632 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms