RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-211ENST00000475315 FAM153BP0C7A2 387 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 METAP2P50579 478 aaKnown RBP eCLIP13.11□□□□□ -0.31
FXR1-211ENST00000475315 GCKRQ14397 625 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 KCNB1Q14721 858 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 FAM153CQ494X1 144 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 NSMCE1Q8WV22 266 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 CUL5Q93034 780 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 NUP58Q9BVL2 599 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 GDF3Q9NR23 364 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 FAM153AQ9UHL3 310 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 CAPN11Q9UMQ6 739 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 RIPOR2Q9Y4F9 1068 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 PRAMEF22A3QJZ6 481 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 GMNCA6NCL1 334 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 SNUPNO95149 360 aaKnown RBP13.11□□□□□ -0.31
FXR1-211ENST00000475315 RAPGEF3O95398 923 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 FGAP02671 866 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 GHRP10912 638 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 RABL6Q3YEC7 729 aaPredicted RBP13.11□□□□□ -0.31
FXR1-211ENST00000475315 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
FXR1-211ENST00000475315 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 CCT6BQ92526 530 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 P3H4Q92791 437 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 SAAL1Q96ER3 474 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 STAMBPL1Q96FJ0 436 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 SEC16BQ96JE7 1060 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 CSRNP2Q9H175 543 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
FXR1-211ENST00000475315 SLC12A6Q9UHW9 1150 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 TRPC6Q9Y210 931 aa13.11□□□□□ -0.31
FXR1-211ENST00000475315 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 KCNJ18B7U540 433 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 SMNDC1O75940 238 aaKnown RBP eCLIP13.1□□□□□ -0.31
FXR1-211ENST00000475315 AFMP43652 599 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 KCNJ12Q14500 433 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 MIS18BP1Q6P0N0 1132 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 PPANQ9NQ55 473 aaKnown RBP13.1□□□□□ -0.31
FXR1-211ENST00000475315 C15orf41Q9Y2V0 281 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 LUC7L2Q9Y383 392 aaKnown RBP13.1□□□□□ -0.31
FXR1-211ENST00000475315 PCDHB6Q9Y5E3 794 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 AFDNP55196 1824 aaKnown RBP13.1□□□□□ -0.31
FXR1-211ENST00000475315 LAMB4A4D0S4 1761 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 PPIP5K2O43314 1243 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 AP1G2O75843 785 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
FXR1-211ENST00000475315 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
FXR1-211ENST00000475315 UBXN1Q04323 297 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 TRIM29Q14134 588 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 PDIA6Q15084 440 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 APOA5Q6Q788 366 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 TMBIM4Q9HC24 238 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 RWDD2AQ9UIY3 292 aa13.1□□□□□ -0.31
FXR1-211ENST00000475315 ANGEL1Q9UNK9 670 aaKnown RBP13.1□□□□□ -0.31
FXR1-211ENST00000475315 SIPA1L3O60292 1781 aaPredicted RBP13.09□□□□□ -0.31
FXR1-211ENST00000475315 STK36Q9NRP7 1315 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 USP54Q70EL1 1684 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 A0A1W2PQC6 194 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 H7C1W4 665 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 PECAM1P16284 738 aaPredicted RBP13.09□□□□□ -0.31
FXR1-211ENST00000475315 RXRAP19793 462 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 CYLC1P35663 651 aaPredicted RBP13.09□□□□□ -0.31
FXR1-211ENST00000475315 CARSP49589 748 aaKnown RBP13.09□□□□□ -0.31
FXR1-211ENST00000475315 VAV2P52735 878 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 RILPL1Q5EBL4 403 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 ZNF507Q8TCN5 953 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 OSBPL9Q96SU4 736 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 KDM4CQ9H3R0 1056 aa13.09□□□□□ -0.31
FXR1-211ENST00000475315 AATFQ9NY61 560 aaKnown RBP eCLIP13.09□□□□□ -0.31
FXR1-211ENST00000475315 MMP1P03956 469 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.31
FXR1-211ENST00000475315 MYO1EQ12965 1108 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 RIPK1Q13546 671 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 WASHC4Q2M389 1173 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 FKBP15Q5T1M5 1219 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.31
FXR1-211ENST00000475315 IRF2BP1Q8IU81 584 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 CCDC47Q96A33 483 aaKnown RBP13.08□□□□□ -0.31
FXR1-211ENST00000475315 HVCN1Q96D96 273 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 ZBTB10Q96DT7 871 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 THOC1Q96FV9 657 aaKnown RBP13.08□□□□□ -0.31
FXR1-211ENST00000475315 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.31
FXR1-211ENST00000475315 SMARCAL1Q9NZC9 954 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.31
FXR1-211ENST00000475315 MYH7P12883 1935 aa13.08□□□□□ -0.32
FXR1-211ENST00000475315 MACROD2A1Z1Q3 448 aa13.08□□□□□ -0.32
FXR1-211ENST00000475315 GLI1P08151 1106 aa13.08□□□□□ -0.32
FXR1-211ENST00000475315 PEX19P40855 299 aa13.08□□□□□ -0.32
FXR1-211ENST00000475315 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.32
FXR1-211ENST00000475315 TRAF1Q13077 416 aa13.08□□□□□ -0.32
FXR1-211ENST00000475315 RBBP5Q15291 538 aaKnown RBP13.08□□□□□ -0.32
FXR1-211ENST00000475315 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.32
FXR1-211ENST00000475315 ZC3H12AQ5D1E8 599 aaKnown RBP13.08□□□□□ -0.32
FXR1-211ENST00000475315 CAPRIN2Q6IMN6 1127 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms