RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 IFNL3Q8IZI9 196 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 GJD3Q8N144 294 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 C1orf131Q8NDD1 294 aaKnown RBP4.16□□□□□ -1.74
SCN3A-207ENST00000471697 NEUROD6Q96NK8 337 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 CORO1BQ9BR76 489 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 ATXN3LQ9H3M9 355 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 LATS2Q9NRM7 1088 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 STRIP2Q9ULQ0 834 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 WASHC2CQ9Y4E1 1318 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 IGF2BP3O00425 579 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 ANP32CO43423 234 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 TIMM44O43615 452 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 ZRANB2O95218 330 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 FAM163BP0C2L3 166 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 BMP7P18075 431 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 ITIH2P19823 946 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 NASPP49321 788 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 ST13P50502 369 aaKnown RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 MCL1Q07820 350 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 TAF1CQ15572 869 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 TKFCQ3LXA3 575 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 INO80DQ53TQ3 878 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 DALRD3Q5D0E6 543 aaKnown RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 PEAR1Q5VY43 1037 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 USPL1Q5W0Q7 1092 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 C14orf80Q86SX3 495 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 DDX42Q86XP3 938 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 SMYD4Q8IYR2 804 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 PDILTQ8N807 584 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 JMYQ8N9B5 988 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 MARCH10Q8NA82 808 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 TTC16Q8NEE8 873 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 HNRNPLLQ8WVV9 542 aaKnown RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 HEXIM2Q96MH2 286 aaKnown RBP4.15□□□□□ -1.75
SCN3A-207ENST00000471697 ZFYVE28Q9HCC9 887 aa4.15□□□□□ -1.75
SCN3A-207ENST00000471697 GIPC1O14908 333 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 PHACTR2O75167 634 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 ECEL1O95672 775 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 LDHCP07864 332 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 PDE6BP35913 854 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 CLCN7P51798 805 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 LRRC41Q15345 812 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 C10orf62Q5T681 223 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-207ENST00000471697 CHPFQ8IZ52 775 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 MYO1HQ8N1T3 1032 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 SYNPOQ8N3V7 929 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 PAF1Q8N7H5 531 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 TTC8Q8TAM2 541 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 DDX54Q8TDD1 881 aaKnown RBP4.14□□□□□ -1.75
SCN3A-207ENST00000471697 FANCD2OSQ96PS1 177 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 FAM126AQ9BYI3 521 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-207ENST00000471697 ZHX3Q9H4I2 956 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 PIDD1Q9HB75 910 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 PRKAG3Q9UGI9 489 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 TPX2Q9ULW0 747 aaKnown RBP4.14□□□□□ -1.75
SCN3A-207ENST00000471697 SPG7Q9UQ90 795 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 LZTS1Q9Y250 596 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 RPGRIP1LQ68CZ1 1315 aa4.14□□□□□ -1.75
SCN3A-207ENST00000471697 TMEM238LA0A1B0GVL6 79 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 SHTN1A0MZ66 631 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 METTL12A8MUP2 240 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 B3GALT4O96024 378 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 VDRP11473 427 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 ATF3P18847 181 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 SOX9P48436 509 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 TRAPPC10P48553 1259 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 ORC1Q13415 861 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 KCTD2Q14681 263 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 TCEA2Q15560 299 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 ACBD5Q5T8D3 534 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-207ENST00000471697 SNX29Q8TEQ0 813 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 KCNN1Q92952 543 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 CCDC120Q96HB5 630 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 SPON2Q9BUD6 331 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 KCNK12Q9HB15 430 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 COPRSQ9NQ92 184 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 INTUQ9ULD6 942 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 PPP2R3BQ9Y5P8 575 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 MRVI1Q9Y6F6 885 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 CNTNAP4Q9C0A0 1308 aa4.13□□□□□ -1.75
SCN3A-207ENST00000471697 A0A096LPE4 126 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 A0A1W2PPZ6 126 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 NPHP1O15259 732 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 SUV39H1O43463 412 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 SCGB1D2O95969 90 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 CELA3BP08861 270 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 RBM10P98175 930 aaKnown RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 IFRD2Q12894 506 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 RASGRF1Q13972 1273 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 COL9A2Q14055 689 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 NKPD1Q17RQ9 610 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 ZXDCQ2QGD7 858 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 AXDND1Q5T1B0 1012 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 L1TD1Q5T7N2 865 aaKnown RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 THNSL2Q86YJ6 484 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 CCNJLQ8IV13 435 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 DRC7Q8IY82 874 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 TEX19Q8NA77 164 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 MYRIPQ8NFW9 859 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms