RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 POLR3DP05423 398 aaPredicted RBP11.56□□□□□ -0.56
C9orf135-202ENST00000466872 SLC19A1P41440 591 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 CDK8P49336 464 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 SPP2Q13103 211 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
C9orf135-202ENST00000466872 TTC22Q5TAA0 569 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 DESI1Q6ICB0 168 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 C17orf99Q6UX52 265 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 LIAT1Q6ZQX7 453 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 SKAP1Q86WV1 359 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 IFNL3Q8IZI9 196 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 PROCA1Q8NCQ7 364 aaPredicted RBP11.56□□□□□ -0.56
C9orf135-202ENST00000466872 C12orf42Q96LP6 360 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 HELLSQ9NRZ9 838 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 ARPP21Q9UBL0 812 aaPredicted RBP11.56□□□□□ -0.56
C9orf135-202ENST00000466872 SLC45A1Q9Y2W3 748 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 BRCA2P51587 3418 aa11.56□□□□□ -0.56
C9orf135-202ENST00000466872 A0A1W2PRG0 241 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 PATL2C9JE40 543 aaKnown RBP11.55□□□□□ -0.56
C9orf135-202ENST00000466872 PDHXO00330 501 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 TLR2O60603 784 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 CENPBP07199 599 aaPredicted RBP11.55□□□□□ -0.56
C9orf135-202ENST00000466872 BCRP11274 1271 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 AKR1B1P15121 316 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 GNAT2P19087 354 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 SDSP20132 328 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 CTGFP29279 349 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 BACE1P56817 501 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 TAF1CQ15572 869 aaPredicted RBP11.55□□□□□ -0.56
C9orf135-202ENST00000466872 CERKLQ49MI3 558 aaPredicted RBP11.55□□□□□ -0.56
C9orf135-202ENST00000466872 ACER1Q8TDN7 264 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 SWAP70Q9UH65 585 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 AGTPBP1Q9UPW5 1226 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 ZMYM6O95789 1325 aa11.55□□□□□ -0.56
C9orf135-202ENST00000466872 PLIN4Q96Q06 1357 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 IGKV6D-41A0A0C4DH26 115 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 FKTNO75072 461 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 CYP2C8P10632 490 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 RASA1P20936 1047 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 HMGCS2P54868 508 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 SEPT2Q15019 361 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 ALX1Q15699 326 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 ABCB5Q2M3G0 1257 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
C9orf135-202ENST00000466872 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 OTUD7BQ6GQQ9 843 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 CLEC10AQ8IUN9 316 aa11.54□□□□□ -0.56
C9orf135-202ENST00000466872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
C9orf135-202ENST00000466872 RBBP6Q7Z6E9 1792 aaKnown RBP11.54□□□□□ -0.56
C9orf135-202ENST00000466872 COL11A1P12107 1806 aaPredicted RBP11.53□□□□□ -0.56
C9orf135-202ENST00000466872 FGRP09769 529 aa11.53□□□□□ -0.56
C9orf135-202ENST00000466872 MCMDC2Q4G0Z9 681 aa11.53□□□□□ -0.56
C9orf135-202ENST00000466872 FASTKD5Q7L8L6 764 aaKnown RBP11.53□□□□□ -0.56
C9orf135-202ENST00000466872 MCOLN1Q9GZU1 580 aa11.53□□□□□ -0.56
C9orf135-202ENST00000466872 AS3MTQ9HBK9 375 aa11.53□□□□□ -0.56
C9orf135-202ENST00000466872 ZFYVE28Q9HCC9 887 aa11.53□□□□□ -0.56
C9orf135-202ENST00000466872 CCDC171Q6TFL3 1326 aa11.53□□□□□ -0.56
C9orf135-202ENST00000466872 C19orf81C9J6K1 198 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 USP17L10C9JJH3 530 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 HSPD1P10809 573 aaKnown RBP11.52□□□□□ -0.57
C9orf135-202ENST00000466872 HOXA7P31268 230 aaPredicted RBP11.52□□□□□ -0.57
C9orf135-202ENST00000466872 RPIAP49247 311 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 GADL1Q6ZQY3 521 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 TMEM179Q6ZVK1 233 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 CENPQQ7L2Z9 268 aaPredicted RBP11.52□□□□□ -0.57
C9orf135-202ENST00000466872 CTU1Q7Z7A3 348 aaKnown RBP11.52□□□□□ -0.57
C9orf135-202ENST00000466872 TNS4Q8IZW8 715 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 CD99L2Q8TCZ2 262 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 RILPL2Q969X0 211 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 ARHGAP39Q9C0H5 1083 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 KIAA1683Q9H0B3 1180 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 ANAPC4Q9UJX5 808 aa11.52□□□□□ -0.57
C9orf135-202ENST00000466872 FGAP02671 866 aa11.51□□□□□ -0.57
C9orf135-202ENST00000466872 SP3Q02447 781 aa11.51□□□□□ -0.57
C9orf135-202ENST00000466872 PPARAQ07869 468 aa11.51□□□□□ -0.57
C9orf135-202ENST00000466872 OTOP1Q7RTM1 612 aa11.51□□□□□ -0.57
C9orf135-202ENST00000466872 CCDC17Q96LX7 622 aa11.51□□□□□ -0.57
C9orf135-202ENST00000466872 PARK7Q99497 189 aaKnown RBP11.51□□□□□ -0.57
C9orf135-202ENST00000466872 CPA4Q9UI42 421 aa11.51□□□□□ -0.57
C9orf135-202ENST00000466872 MINDY4BA8MYZ0 360 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 VCAM1P19320 739 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 CHMLP26374 656 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 NOVP48745 357 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 TDO2P48775 406 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 LACTBP83111 547 aaPredicted RBP11.5□□□□□ -0.57
C9orf135-202ENST00000466872 RAB3GAP1Q15042 981 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 PTPRNQ16849 979 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 PPP2R2DQ66LE6 453 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 USP17L2Q6R6M4 530 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 LYPD8Q6UX82 237 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 NAPBQ9H115 298 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 ASCC2Q9H1I8 757 aaPredicted RBP11.5□□□□□ -0.57
C9orf135-202ENST00000466872 INCENPQ9NQS7 918 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 TMX2Q9Y320 296 aa11.5□□□□□ -0.57
C9orf135-202ENST00000466872 PEX10O60683 326 aa11.49□□□□□ -0.57
C9orf135-202ENST00000466872 PRDM1O75626 825 aa11.49□□□□□ -0.57
C9orf135-202ENST00000466872 CNMDO75829 334 aa11.49□□□□□ -0.57
C9orf135-202ENST00000466872 CTDSPL2Q05D32 466 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms