RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 MKL1Q969V6 931 aa18.36■□□□□ 0.53
HOXB3-204ENST00000465120 EVI5LQ96CN4 794 aa18.36■□□□□ 0.53
HOXB3-204ENST00000465120 LRCH3Q96II8 777 aa18.36■□□□□ 0.53
HOXB3-204ENST00000465120 LBHD1Q9BQE6 289 aaPredicted RBP18.36■□□□□ 0.53
HOXB3-204ENST00000465120 GREB1LQ9C091 1923 aaPredicted RBP18.36■□□□□ 0.53
HOXB3-204ENST00000465120 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
HOXB3-204ENST00000465120 MYH4Q9Y623 1939 aa18.36■□□□□ 0.53
HOXB3-204ENST00000465120 RARBP10826 455 aa18.35■□□□□ 0.53
HOXB3-204ENST00000465120 RTP1P59025 263 aa18.35■□□□□ 0.53
HOXB3-204ENST00000465120 CTDSPL2Q05D32 466 aa18.35■□□□□ 0.53
HOXB3-204ENST00000465120 TDHQ8IZJ6 230 aa18.35■□□□□ 0.53
HOXB3-204ENST00000465120 FERMT2Q96AC1 680 aa18.35■□□□□ 0.53
HOXB3-204ENST00000465120 RAVER2Q9HCJ3 691 aaKnown RBP18.35■□□□□ 0.53
HOXB3-204ENST00000465120 CNPY2Q9Y2B0 182 aa18.35■□□□□ 0.53
HOXB3-204ENST00000465120 DIS3Q9Y2L1 958 aaKnown RBP18.35■□□□□ 0.53
HOXB3-204ENST00000465120 SZT2Q5T011 3432 aa18.35■□□□□ 0.53
HOXB3-204ENST00000465120 TSPY2A6NKD2 308 aa18.34■□□□□ 0.53
HOXB3-204ENST00000465120 BMP3P12645 472 aa18.34■□□□□ 0.53
HOXB3-204ENST00000465120 ADCYAP1R1P41586 468 aa18.34■□□□□ 0.53
HOXB3-204ENST00000465120 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
HOXB3-204ENST00000465120 XPNPEP3Q9NQH7 507 aa18.34■□□□□ 0.53
HOXB3-204ENST00000465120 NRBP1Q9UHY1 535 aa18.34■□□□□ 0.53
HOXB3-204ENST00000465120 STX8Q9UNK0 236 aa18.34■□□□□ 0.53
HOXB3-204ENST00000465120 RIPK3Q9Y572 518 aa18.34■□□□□ 0.53
HOXB3-204ENST00000465120 SALL3Q9BXA9 1300 aa18.33■□□□□ 0.53
HOXB3-204ENST00000465120 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 TMEM232C9JQI7 657 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 PDE1AP54750 535 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 HDAC1Q13547 482 aaPredicted RBP18.33■□□□□ 0.52
HOXB3-204ENST00000465120 LRRC41Q15345 812 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 PPP4R3BQ5MIZ7 849 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 SLC39A5Q6ZMH5 540 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 PRDM5Q9NQX1 630 aaPredicted RBP18.33■□□□□ 0.52
HOXB3-204ENST00000465120 TOMM22Q9NS69 142 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 SYNPO2Q9UMS6 1093 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 PLXNA1Q9UIW2 1896 aa18.33■□□□□ 0.52
HOXB3-204ENST00000465120 DNAH12Q6ZR08 3092 aa18.32■□□□□ 0.52
HOXB3-204ENST00000465120 RANBP6O60518 1105 aaKnown RBP18.32■□□□□ 0.52
HOXB3-204ENST00000465120 TAL1P17542 331 aaPredicted RBP18.32■□□□□ 0.52
HOXB3-204ENST00000465120 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
HOXB3-204ENST00000465120 RNF180Q86T96 592 aa18.32■□□□□ 0.52
HOXB3-204ENST00000465120 SLC38A10Q9HBR0 1119 aa18.32■□□□□ 0.52
HOXB3-204ENST00000465120 INCENPQ9NQS7 918 aa18.32■□□□□ 0.52
HOXB3-204ENST00000465120 HELLSQ9NRZ9 838 aa18.32■□□□□ 0.52
HOXB3-204ENST00000465120 MTMR7Q9Y216 660 aa18.32■□□□□ 0.52
HOXB3-204ENST00000465120 ATP2A1O14983 1001 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 PGK1P00558 417 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 AKR1A1P14550 325 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 MCCP23508 829 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 SLC1A4P43007 532 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 STAT2P52630 851 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 VPS53Q5VIR6 699 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 CHURC1Q8WUH1 139 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 LNPKQ9C0E8 428 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 HOMER2Q9NSB8 354 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 FBXO40Q9UH90 709 aa18.31■□□□□ 0.52
HOXB3-204ENST00000465120 ZHX1Q9UKY1 873 aaPredicted RBP18.31■□□□□ 0.52
HOXB3-204ENST00000465120 PLIN4Q96Q06 1357 aa18.3■□□□□ 0.52
HOXB3-204ENST00000465120 SMCHD1A6NHR9 2005 aa18.3■□□□□ 0.52
HOXB3-204ENST00000465120 TRIM60Q495X7 471 aa18.3■□□□□ 0.52
HOXB3-204ENST00000465120 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
HOXB3-204ENST00000465120 FAM184BQ9ULE4 1060 aa18.3■□□□□ 0.52
HOXB3-204ENST00000465120 NMT2O60551 498 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 ZNF865P0CJ78 1059 aaPredicted RBP18.29■□□□□ 0.52
HOXB3-204ENST00000465120 FDX1P10109 184 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 OAZ1P54368 228 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 LRIT3Q3SXY7 679 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 MCMDC2Q4G0Z9 681 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 RRP12Q5JTH9 1297 aaKnown RBP18.29■□□□□ 0.52
HOXB3-204ENST00000465120 KCTD1Q719H9 257 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 FAM160B2Q86V87 743 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
HOXB3-204ENST00000465120 CHST13Q8NET6 341 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 STAG1Q8WVM7 1258 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 LENG1Q96BZ8 264 aaPredicted RBP18.29■□□□□ 0.52
HOXB3-204ENST00000465120 GMCL1Q96IK5 515 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 FAM227BQ96M60 508 aa18.29■□□□□ 0.52
HOXB3-204ENST00000465120 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.29■□□□□ 0.52
HOXB3-204ENST00000465120 SYNGAP1Q96PV0 1343 aa18.28■□□□□ 0.52
HOXB3-204ENST00000465120 FOXP2O15409 715 aa18.28■□□□□ 0.52
HOXB3-204ENST00000465120 DNAJC25-GNG10A0A024R161 153 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 A0A0D9SFI3 127 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 SNAI1O95863 264 aaPredicted RBP18.27■□□□□ 0.52
HOXB3-204ENST00000465120 FGAP02671 866 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.52
HOXB3-204ENST00000465120 AAMPQ13685 434 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 CCDC96Q2M329 555 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 CCDC174Q6PII3 467 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 DEFB123Q8N688 67 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 AGBL1Q96MI9 1066 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 ACAD9Q9H845 621 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 IL17RBQ9NRM6 502 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 ANAPC4Q9UJX5 808 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 PHF24Q9UPV7 400 aa18.27■□□□□ 0.52
HOXB3-204ENST00000465120 LAMA3Q16787 3333 aa18.26■□□□□ 0.51
HOXB3-204ENST00000465120 POTEB2H3BUK9 544 aa18.26■□□□□ 0.51
HOXB3-204ENST00000465120 ALAS1P13196 640 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms