RNA–Protein interactions for RNA: ENST00000460820.6

ATP5C1-204, Transcript of ATP synthase subunit gamma, mitochondrial, human

TSL 2

Gene ATP5C1, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP5C1-204	ENST00000460820	GREB1L	Q9C091	1923 aa	Predicted RBP	13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	DDTL	A6NHG4	134 aa	Predicted RBP	13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	MPHOSPH10	O00566	681 aa	Known RBP	13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GADD45B	O75293	160 aa	Predicted RBP	13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	KRT2	P35908	639 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	NASP	P49321	788 aa	Predicted RBP	13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	STK38	Q15208	465 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	RILPL1	Q5EBL4	403 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GPATCH4	Q5T3I0	446 aa	Known RBP	13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	RBM26	Q5T8P6	1007 aa	Known RBP	13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	OTUD7B	Q6GQQ9	843 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	FAM173B	Q6P4H8	233 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	DIS3L2	Q8IYB7	885 aa	Known RBP	13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	MKL1	Q969V6	931 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	ZBED3	Q96IU2	234 aa	Predicted RBP	13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CHAMP1	Q96JM3	812 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CSRNP1	Q96S65	589 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	PHF20	Q9BVI0	1012 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	PCDHGA10	Q9Y5H3	936 aa		13.59	□□□□□ -0.23
ATP5C1-204	ENST00000460820	KLRF2	D3W0D1	207 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	BMP15	O95972	392 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	GUCY1A2	P33402	732 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	CACNB3	P54284	484 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	PKN1	Q16512	942 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	ABCB5	Q2M3G0	1257 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	ZSCAN23	Q3MJ62	389 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	ANO1	Q5XXA6	986 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	ZFPM1	Q8IX07	1006 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	CMTR1	Q8N1G2	835 aa	Known RBP	13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	HOOK2	Q96ED9	719 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	RRP36	Q96EU6	259 aa	Known RBP	13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	AIFM3	Q96NN9	605 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	USP28	Q96RU2	1077 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	CLIP2	Q9UDT6	1046 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	SEC63	Q9UGP8	760 aa	Known RBP	13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	NOL7	Q9UMY1	257 aa	Known RBP	13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	PCDHAC2	Q9Y5I4	1007 aa		13.58	□□□□□ -0.24
ATP5C1-204	ENST00000460820	DICER1	Q9UPY3	1922 aa	Known RBP	13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	MYH4	Q9Y623	1939 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	TCP10L2	B9ZVM9	353 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820		H7C1D1	291 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	SNHG28	P0DPA3	235 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	LMNB1	P20700	586 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	DEK	P35659	375 aa	Known RBP	13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	ME1	P48163	572 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	SH3BP5L	Q7L8J4	393 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	BICD2	Q8TD16	824 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	DCAF4	Q8WV16	495 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	GINM1	Q9NU53	330 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	DDX19A	Q9NUU7	478 aa	Known RBP	13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820	SIPA1L1	O43166	1804 aa		13.57	□□□□□ -0.24
ATP5C1-204	ENST00000460820		A0A1W2PQ27	194 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820		A0A1W2PQ64	194 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820		A0A1W2PQD8	194 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	WNT10B	O00744	389 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	SPTLC2	O15270	562 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	PPP6R2	O75170	966 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	PDHB	P11177	359 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	YBX3	P16989	372 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	1e-7	■□□□□ 10.5
ATP5C1-204	ENST00000460820	MRE11	P49959	708 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	NLRP5	P59047	1200 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	RASSF7	Q02833	373 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	SLC39A14	Q15043	492 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	ADAL	Q6DHV7	355 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	CCDC73	Q6ZRK6	1079 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	LINC00301	Q8NCQ3	95 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	BBX	Q8WY36	941 aa	Predicted RBP	13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	WNT2B	Q93097	391 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	VEZT	Q9HBM0	779 aa		13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.56	□□□□□ -0.24
ATP5C1-204	ENST00000460820	CLRN2	A0PK11	232 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	BTBD18	B2RXH4	712 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	PPP1R3G	B7ZBB8	358 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	KIF28P	B7ZC32	967 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	GNA11	P29992	359 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	TRAPPC10	P48553	1259 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	CEBPZ	Q03701	1054 aa	Known RBP	13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	ICA1	Q05084	483 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	TYW1B	Q6NUM6	668 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	LRSAM1	Q6UWE0	723 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	THSD4	Q6ZMP0	1018 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	ARHGAP27	Q6ZUM4	889 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	STAG2	Q8N3U4	1231 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	RIOX1	Q9H6W3	641 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	SH2D4A	Q9H788	454 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	DNAJC18	Q9H819	358 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	ARHGEF10L	Q9HCE6	1279 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	GJB4	Q9NTQ9	266 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	BARHL2	Q9NY43	387 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	VPS54	Q9P1Q0	977 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	TMEM63C	Q9P1W3	806 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	CNOT7	Q9UIV1	285 aa	Known RBP	13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	KCNJ14	Q9UNX9	436 aa		13.55	□□□□□ -0.24
ATP5C1-204	ENST00000460820	FSD2	A1L4K1	749 aa		13.54	□□□□□ -0.24
ATP5C1-204	ENST00000460820	USP17L5	A8MUK1	530 aa		13.54	□□□□□ -0.24
ATP5C1-204	ENST00000460820	CTAGE5	O15320	804 aa		13.54	□□□□□ -0.24
ATP5C1-204	ENST00000460820	GMPS	P49915	693 aa	Predicted RBP	13.54	□□□□□ -0.24
ATP5C1-204	ENST00000460820	PRELP	P51888	382 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms