RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 SNED1Q8TER0 1413 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 RNF225M0QZC1 329 aaPredicted RBP11.17□□□□□ -0.62
LINC01949-201ENST00000445770 STXBP3O00186 592 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 CCNT1O60563 726 aaKnown RBP11.17□□□□□ -0.62
LINC01949-201ENST00000445770 GTF2F1P35269 517 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC01949-201ENST00000445770 TTBK2Q6IQ55 1244 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 TTF2Q9UNY4 1162 aaKnown RBP11.17□□□□□ -0.62
LINC01949-201ENST00000445770 PPP1R3GB7ZBB8 358 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 ABL1P00519 1130 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 E2F4Q16254 413 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 TXNRD1Q16881 649 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 CRY2Q49AN0 593 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 KIAA0825Q8IV33 1275 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 PDCL2Q8N4E4 241 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 TAB2Q9NYJ8 693 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 HOOK1Q9UJC3 728 aaKnown RBP11.16□□□□□ -0.62
LINC01949-201ENST00000445770 PCDHA4Q9UN74 947 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 COL24A1Q17RW2 1714 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 TAF1LQ8IZX4 1826 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 STAT6P42226 847 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 RCAN1P53805 252 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 GRM4Q14833 912 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 UBE2SQ16763 222 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 TMEM139Q8IV31 216 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 AMOTL1Q8IY63 956 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 TC2NQ8N9U0 490 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
LINC01949-201ENST00000445770 CCDC150Q8NCX0 1101 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 ZNF622Q969S3 477 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC01949-201ENST00000445770 LZTFL1Q9NQ48 299 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 TFR2Q9UP52 801 aa11.16□□□□□ -0.62
LINC01949-201ENST00000445770 PPEF1O14829 653 aaPredicted RBP11.15□□□□□ -0.62
LINC01949-201ENST00000445770 TECP42680 631 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 NAALADL2Q58DX5 795 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 NT5DC1Q5TFE4 455 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 KCTD1Q719H9 257 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 C4orf32Q8N8J7 132 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 MLKLQ8NB16 471 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 RBM17Q96I25 401 aaKnown RBP11.15□□□□□ -0.62
LINC01949-201ENST00000445770 WDR24Q96S15 920 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 ZSWIM4Q9H7M6 989 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 IMPACTQ9P2X3 320 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 SCAF8Q9UPN6 1271 aaKnown RBP11.15□□□□□ -0.62
LINC01949-201ENST00000445770 CCDC88AQ3V6T2 1871 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 SMCO2A6NFE2 343 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 RBL2Q08999 1139 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 ERCC6LQ2NKX8 1250 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 ILDR2Q71H61 639 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 APTXQ7Z2E3 356 aaKnown RBP11.15□□□□□ -0.62
LINC01949-201ENST00000445770 DGKHQ86XP1 1220 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 COL23A1Q86Y22 540 aaPredicted RBP11.15□□□□□ -0.62
LINC01949-201ENST00000445770 MTA3Q9BTC8 594 aa11.15□□□□□ -0.62
LINC01949-201ENST00000445770 GPR75-ASB3A0A0A6YYF3 556 aa11.15□□□□□ -0.63
LINC01949-201ENST00000445770 CTIFO43310 598 aaKnown RBP11.15□□□□□ -0.63
LINC01949-201ENST00000445770 SPECC1LQ69YQ0 1117 aa11.15□□□□□ -0.63
LINC01949-201ENST00000445770 SAMD1Q6SPF0 538 aaPredicted RBP11.15□□□□□ -0.63
LINC01949-201ENST00000445770 SH3RF1Q7Z6J0 888 aa11.15□□□□□ -0.63
LINC01949-201ENST00000445770 SPATA20Q8TB22 786 aa11.15□□□□□ -0.63
LINC01949-201ENST00000445770 FERMT2Q96AC1 680 aa11.15□□□□□ -0.63
LINC01949-201ENST00000445770 BAG1Q99933 345 aaPredicted RBP11.15□□□□□ -0.63
LINC01949-201ENST00000445770 MRPL44Q9H9J2 332 aaKnown RBP11.15□□□□□ -0.63
LINC01949-201ENST00000445770 ADAMTSL1Q8N6G6 1762 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 NHSQ6T4R5 1651 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 NEMFO60524 1076 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 MMP10P09238 476 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 PARP1P09874 1014 aaKnown RBP11.14□□□□□ -0.63
LINC01949-201ENST00000445770 PRCPP42785 496 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 RBM5P52756 815 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC01949-201ENST00000445770 KRT27Q7Z3Y8 459 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 IQUBQ8NA54 791 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 KIF18AQ8NI77 898 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 ENOX1Q8TC92 643 aaKnown RBP11.14□□□□□ -0.63
LINC01949-201ENST00000445770 BARHL2Q9NY43 387 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 TRPC5Q9UL62 973 aaPredicted RBP11.14□□□□□ -0.63
LINC01949-201ENST00000445770 PALM3A6NDB9 673 aaPredicted RBP11.14□□□□□ -0.63
LINC01949-201ENST00000445770 URI1O94763 535 aaPredicted RBP11.14□□□□□ -0.63
LINC01949-201ENST00000445770 TDP2O95551 362 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 CASP14P31944 242 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 TXKP42681 527 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 FXR1P51114 621 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC01949-201ENST00000445770 GSTO1P78417 241 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 PPP2R5BQ15173 497 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 DTHD1Q6ZMT9 781 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 C16orf86Q6ZW13 317 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 IGSF22Q8N9C0 903 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 TBCKQ8TEA7 893 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 NELFBQ8WX92 580 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 PPP2R2CQ9Y2T4 447 aa11.14□□□□□ -0.63
LINC01949-201ENST00000445770 LAMB1P07942 1786 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 POTEMA6NI47 508 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 G3V3G9 751 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 RPN1P04843 607 aaKnown RBP11.13□□□□□ -0.63
LINC01949-201ENST00000445770 PCP11498 1178 aaKnown RBP11.13□□□□□ -0.63
LINC01949-201ENST00000445770 FCER1AP12319 257 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 IL1R1P14778 569 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 PLCG1P19174 1290 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 ATP2B4P23634 1241 aa11.13□□□□□ -0.63
LINC01949-201ENST00000445770 CHRNA5P30532 468 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms