RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 PICALMQ13492 652 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 SLFNL1Q499Z3 407 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 C12orf60Q5U649 245 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 MAPKAPK5Q8IW41 473 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 CSRNP1Q96S65 589 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 SPOCK3Q9BQ16 436 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 DDX4Q9NQI0 724 aaKnown RBP8.33□□□□□ -1.08
EPHA4-206ENST00000424339 GINM1Q9NU53 330 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 SERPINB13Q9UIV8 391 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 ANAPC4Q9UJX5 808 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 MAP4K5Q9Y4K4 846 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 PCDHAC2Q9Y5I4 1007 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 LAMA4Q16363 1823 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 BAZ2AQ9UIF9 1905 aaKnown RBP8.33□□□□□ -1.08
EPHA4-206ENST00000424339 TRPM7Q96QT4 1865 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 USP17L12C9JPN9 530 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 USP17L21D6R901 530 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 ZNF213O14771 459 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 PRKAB2O43741 272 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 ZKSCAN1P17029 563 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-206ENST00000424339 GJA5P36382 358 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 ANP32AP39687 249 aaKnown RBP8.32□□□□□ -1.08
EPHA4-206ENST00000424339 CACNB3P54284 484 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 SRSF11Q05519 484 aaKnown RBP8.32□□□□□ -1.08
EPHA4-206ENST00000424339 PDE4BQ07343 736 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 TCP10Q12799 353 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 CBLBQ13191 982 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 KRT32Q14532 448 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 CTR9Q6PD62 1173 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 CCDC129Q6ZRS4 1044 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 CRACR2BQ8N4Y2 399 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-206ENST00000424339 GALNT6Q8NCL4 622 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 CCDC17Q96LX7 622 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 TEPSINQ96N21 525 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 BACH2Q9BYV9 841 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 TMEM39BQ9GZU3 492 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 LSG1Q9H089 658 aaKnown RBP8.32□□□□□ -1.08
EPHA4-206ENST00000424339 CNNM2Q9H8M5 875 aa8.32□□□□□ -1.08
EPHA4-206ENST00000424339 EPB41L4AQ9HCS5 686 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-206ENST00000424339 ASTN2O75129 1339 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-206ENST00000424339 PAPPA2Q9BXP8 1791 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 FOXP2O15409 715 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 CELA2BP08218 269 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-206ENST00000424339 GABPAQ06546 454 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 PPARAQ07869 468 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 C8orf34Q49A92 452 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 VPS53Q5VIR6 699 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 MAP1SQ66K74 1059 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-206ENST00000424339 C16orf86Q6ZW13 317 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 ARMC9Q7Z3E5 817 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 SH3RF1Q7Z6J0 888 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 USP48Q86UV5 1035 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 BEND7Q8N7W2 519 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-206ENST00000424339 CDCA5Q96FF9 252 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 IPO9Q96P70 1041 aaKnown RBP8.31□□□□□ -1.08
EPHA4-206ENST00000424339 ZNF341Q9BYN7 854 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 MYH8P13535 1937 aa8.31□□□□□ -1.08
EPHA4-206ENST00000424339 DDTLA6NHG4 134 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-206ENST00000424339 ADM5C9JUS6 153 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 ORC4O43929 436 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
EPHA4-206ENST00000424339 FGRP09769 529 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 IREB2P48200 963 aaKnown RBP8.3□□□□□ -1.08
EPHA4-206ENST00000424339 ANAPC15P60006 121 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 TRDNQ13061 729 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 TTLL12Q14166 644 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-206ENST00000424339 NECTIN1Q15223 517 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 MAP3K11Q16584 847 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 TSGA10IPQ3SY00 556 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 AKNAD1Q5T1N1 836 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 PPP1R26Q5T8A7 1209 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-206ENST00000424339 MFSD6Q6ZSS7 791 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 Q6ZVU0 165 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 C2orf69Q8N8R5 385 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 STAG1Q8WVM7 1258 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 C1QTNF2Q9BXJ5 285 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 GLIS2Q9BZE0 524 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-206ENST00000424339 KRT23Q9C075 422 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 IL25Q9H293 177 aa8.3□□□□□ -1.08
EPHA4-206ENST00000424339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.3□□□□□ -1.08
EPHA4-206ENST00000424339 SAP30BPQ9UHR5 308 aaKnown RBP8.3□□□□□ -1.08
EPHA4-206ENST00000424339 RBM8AQ9Y5S9 174 aaKnown RBP8.3□□□□□ -1.08
EPHA4-206ENST00000424339 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 MINDY4BA8MYZ0 360 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 CTNND1O60716 968 aaKnown RBP8.29□□□□□ -1.08
EPHA4-206ENST00000424339 ASNSP08243 561 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 HSPA4P34932 840 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 PLCD1P51178 756 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 PTH1RQ03431 593 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 CCDC178Q5BJE1 867 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 NBPF12Q5TAG4 269 aaPredicted RBP8.29□□□□□ -1.08
EPHA4-206ENST00000424339 TATDN1Q6P1N9 297 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 SH3BP5LQ7L8J4 393 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 RALYLQ86SE5 291 aaKnown RBP8.29□□□□□ -1.08
EPHA4-206ENST00000424339 ZFPM1Q8IX07 1006 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 TSC1Q92574 1164 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms